Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0481100-04
CDS Infomation	cds chromosome:IRGSP-1.0:5:23653965:23662350:1 gene:Os05g0481100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:J013034D11, full insert sequence. (Os05t0481100-01);Similar to predicted protein. (Os05t0481100-02);Similar to cDNA clone:J013034D11, full insert sequence. (Os05t0481100-03);Similar to cDNA clone:J013034D11, full insert sequence. (Os05t0481100-04);Similar to cDNA clone:J013034D11, full insert sequence. (Os05t0481100-05);Similar to cDNA clone:J013021N20, full insert sequence. (Os05t0481100-06)
Sequence	ATGATCAATTTCGGAGGAGTACTCTGTGCAGTTACCCTTGTGGTGTTGCTCCCCTTCTTA GAGGCTGCAGATGGAAAATCTACTGATCCTTCAGAAGTCAGTGCACTTATGGCTATCAAG GGAAGCTTAGTTGATCCTATGAACAACCTCAAGAATTGGAATAGGGGAGATCCATGCACA AAAAATTGGACAGGGGTCTTCTGCCATGATTTGGGTGATACATATCTTCATGTAACAGAA CTGCAACTGTTTAGGAGGAACCTCTCTGGAAATTTGGTACCAGAGGTCAGTCTTTTATCT CAGCTGAAAATATTGGATTTTATGTGGAACAATTTAACAGGCAACATCCCAAAAGAGATA GGCAATATCACTACGCTCAAACTTATATTATTAAATGGAAATCAGCTCTCTGGTCTTTTA CCAGATGAGATTGGCAACCTTCAAAGCTTAACAAGGTTACAGGTTGACCAAAACCATCTA TCCGGCGCAATACCTAAATCATTTGCCAACTTAAGAAGTGTGAAGCATCTTCACATGAAT AATAATTCATTAAGTGGGCAAATCCCGTCCGAATTGTCCAGACTGAATACACTTTTGCAC CTCCTTGTTGATAACAACAATTTGTCTGGGCCTCTTCCTCCAGAACTAGCTGCGGCAAAA AGCTTGAAAATACTTCAGGCTGACAATAATAACTTCAGCGGGAGTTCCATCCCTACTCTG TATTACAACATGTCCGGACTATTTAAACTGAGTCTTCGAAACTGCAGTTTGCAGGGTGCT ATTCCTGATCTGAGTGCCATACCTCAACTGGACTATTTGGATCTTAGCTGGAACCAGCTG ACAGGATCTATCCCAACTAATAAGCTTGCTTCAAATATCACTACAATTGATTTGTCACAT AACATGCTTAATGGAACTATTCCATCGAACTTTTCAGGGCTTCCTTATCTTCAGCTATTG TCACTTAAAAATAATCTTTTAGATGGTTCTGTTCCCTCGGAAATTTGGGCTGGCGTCAAC CCTAACAGAAACGGAAGCCTTGTACTGGACTTCCAAAATAATTCTCTCAATATGCTTCCA GCTGAAATTAGTCCTCCTCCACCAAATGTTACTGTCGTGTTATATGGAAATCCTATATGT GAGAATTCTAGTGAAACTCTGATAATCAACCTTTGCCGCCTCCAGTCAATAAACCTGGAA AAATCTAAACAGGAAACAAGCACTGCCATGGTTTGTGGAGCTTGCCCGACAGAAAAAAAT TATGAGTACAATCCTTCATTCTCGGACCAATGTTTTTGTGCGGTGCCACTTGGAGTTGGA CTTCGGTTGAAGAGTCCAGGAGTCACAGACTTTCATCCATACGAAAATGCTTTCAAGATT GACCTAACTTCTTTGTTGCAGTTGTTTCCTTACCAGCTATATATTGAGAACTACATATGG GAAGTTGGTCCAAGGCTAAATATGCACCTAAAGTTATTTCCAAGCAATACAAGTTTGTTC AACATGTCTGAGGTTGTCCGACTCAGACACGTACTTGCTGGATGGGAAATTACACTTTTA GATGTATTTGGTCCATATGAGCTTCTCAATTTCACACTTGGTTCCTATGAAGATGAATAT CCAAATCTAGCTTCATCAGGTTTAAGCAAAGCTGCACTGGGTGGTATCTTGGCAAGCACA ATAGCTAGTGCTATTGCACTTTCTGCAGTAGTTACTGCTCTTATAATGAGAAGGAATTCA AGAACTAATAGAATTTCAAGACGTTCATTGTCGAGATTTTCTGTCAAAATTGATGGGGTC AGATGCTTCACATATGAAGAAATGGCTTCTGCTACAAATAATTTTGATATGTCAGCTCAA GTTGGTCAAGGAGGTTATGGAATAGTCTATAAAGGAATTCTAGCTGATGGAACAATTGTT GCAATCAAAAGGGCACACGAGGATTCTCTTCAAGGTTCAACAGAGTTTTGCACAGAAATA GAGCTGTTGTCTAGATTGCATCATCGCAATCTGGTTGCGTTGGTTGGTTACTGTGATGAA GAAAATGAACAGATGCTAGTTTATGAATTCATGCCGAATGGCACTTTACGTGATCATCTT TCTGGAAAGTCCAAACCACCTCTCGGTTTTGGTTTGAGGCTGCACATTGCATTGGGTGCT TCAAAGGGAATTCTGTATCTCCACACCGATGCAGATCCTCCTATATTTCACCGTGATGTT AAGGCCAGCAATATTTTGTTGGATTCTAAATATGTCGCCAAGGTAGCTGACTTCGGTCTT TCGAGGCTTGCTCCAGTACCAGATGTTGAAGGGGCTTTACCAGCTCATGTCTCCACCGTT GTTAAGGGCACCCCTGGGTATCTTGATCCAGAATACTTCCTAACTCATAAATTGACGGAT AAAAGTGATGTGTACAGCCTTGGGGTTGTTTTTCTTGAATTGTTGACCGGGATGAAGCCT ATTGAGCATGGTAAAAACATAGTGAGAGAGGTAAAAAAAGCTTACCGATCAGGCAATATA TCTGAAATCATGGATACCCGGATGGGCTTGTGTTCTCCAGAGTGTGTGGATAGCTTCCTC CAACTTGCAATGAAGTGCTCTCGGGATGAGACTGACGCTCGGCCATCCATGACAGAGATT GTTAGAGAACTTGAGCTCATCTTGAAGATAATGCCAGAGGGTGATCTTATCCAGCTGGAA ACTCCACAGACATACTCAGGACGTGCTATGAGCAAGGACCCTATGAGTAAATCTACATCA AATTCAACAAATGGGAATTACTTGGCCTCATCTCAAACTTTTACTAGTGTTGATGCAAGT AGTAGCGGCGTGCTTTCTGGGATGGTGAGTCCTCGGTAA

Peptide Sequence

PEP ID	Os05t0481100-04
PEP Infomation	pep chromosome:IRGSP-1.0:5:23653965:23662350:1 gene:Os05g0481100 transcript:Os05t0481100-04 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:J013034D11, full insert sequence. (Os05t0481100-01);Similar to predicted protein. (Os05t0481100-02);Similar to cDNA clone:J013034D11, full insert sequence. (Os05t0481100-03);Similar to cDNA clone:J013034D11, full insert sequence. (Os05t0481100-04);Similar to cDNA clone:J013034D11, full insert sequence. (Os05t0481100-05);Similar to cDNA clone:J013021N20, full insert sequence. (Os05t0481100-06)
Sequence	MINFGGVLCAVTLVVLLPFLEAADGKSTDPSEVSALMAIKGSLVDPMNNLKNWNRGDPCT KNWTGVFCHDLGDTYLHVTELQLFRRNLSGNLVPEVSLLSQLKILDFMWNNLTGNIPKEI GNITTLKLILLNGNQLSGLLPDEIGNLQSLTRLQVDQNHLSGAIPKSFANLRSVKHLHMN NNSLSGQIPSELSRLNTLLHLLVDNNNLSGPLPPELAAAKSLKILQADNNNFSGSSIPTL YYNMSGLFKLSLRNCSLQGAIPDLSAIPQLDYLDLSWNQLTGSIPTNKLASNITTIDLSH NMLNGTIPSNFSGLPYLQLLSLKNNLLDGSVPSEIWAGVNPNRNGSLVLDFQNNSLNMLP AEISPPPPNVTVVLYGNPICENSSETLIINLCRLQSINLEKSKQETSTAMVCGACPTEKN YEYNPSFSDQCFCAVPLGVGLRLKSPGVTDFHPYENAFKIDLTSLLQLFPYQLYIENYIW EVGPRLNMHLKLFPSNTSLFNMSEVVRLRHVLAGWEITLLDVFGPYELLNFTLGSYEDEY PNLASSGLSKAALGGILASTIASAIALSAVVTALIMRRNSRTNRISRRSLSRFSVKIDGV RCFTYEEMASATNNFDMSAQVGQGGYGIVYKGILADGTIVAIKRAHEDSLQGSTEFCTEI ELLSRLHHRNLVALVGYCDEENEQMLVYEFMPNGTLRDHLSGKSKPPLGFGLRLHIALGA SKGILYLHTDADPPIFHRDVKASNILLDSKYVAKVADFGLSRLAPVPDVEGALPAHVSTV VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMKPIEHGKNIVREVKKAYRSGNI SEIMDTRMGLCSPECVDSFLQLAMKCSRDETDARPSMTEIVRELELILKIMPEGDLIQLE TPQTYSGRAMSKDPMSKSTSNSTNGNYLASSQTFTSVDASSSGVLSGMVSPR

Transcript Sequence

Transcript ID	Os05t0481100-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:23653965:23662350:1 gene:Os05g0481100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:J013034D11, full insert sequence. (Os05t0481100-01);Similar to predicted protein. (Os05t0481100-02);Similar to cDNA clone:J013034D11, full insert sequence. (Os05t0481100-03);Similar to cDNA clone:J013034D11, full insert sequence. (Os05t0481100-04);Similar to cDNA clone:J013034D11, full insert sequence. (Os05t0481100-05);Similar to cDNA clone:J013021N20, full insert sequence. (Os05t0481100-06)
Sequence	GCTGCCGCTGCATGCATCTGCGGAGTTTAGTTGGGACGTCGTGGTTGCGAATTAGGATGG TGTTACTGTCAGGTTTCGTTGGCCTGATGTTGCTGAGTGGCAGATGTGTTATTTGTCTCT AGTTTGATTGATTTTGATCGCACAGAGCCATTGCTTGAGCACAAAAGCGACTAGCTAGGC AGGTTGTTAGAGGCAGAAGAAGTAGGTACAAGTAAACGATACAAATGGGGTGATCTTCTT TTCTGAAGAACTTTCATGTCACTTGCATACTGTTACCGTCAAATTTGGCCATCTGTTTCA GTTTTCATTGATCCAACTTTCATTAAGCAACGGAGTATAGAGAACCGGAGTGATTTGTTT TCTTGATATTGGGGAATTTTCTGAACCCCATGTACCAAACTGGGCATGCATATGCAAACA CCCAAAACCTCGTGCTTCAAAAAGAGGAATAAATGATATCTAACATCATAAACAATGGTG GTATTCATAAACTCTTCTTTTTTCCTAGTTAGGATCCTGAAATTTTGGAATTTTGCTGTC GTGGATATGACTAGTTGCTGCTGATTATCTTGAAGACATGATCAATTTCGGAGGAGTACT CTGTGCAGTTACCCTTGTGGTGTTGCTCCCCTTCTTAGAGGCTGCAGATGGAAAATCTAC TGATCCTTCAGAAGTCAGTGCACTTATGGCTATCAAGGGAAGCTTAGTTGATCCTATGAA CAACCTCAAGAATTGGAATAGGGGAGATCCATGCACAAAAAATTGGACAGGGGTCTTCTG CCATGATTTGGGTGATACATATCTTCATGTAACAGAACTGCAACTGTTTAGGAGGAACCT CTCTGGAAATTTGGTACCAGAGGTCAGTCTTTTATCTCAGCTGAAAATATTGGATTTTAT GTGGAACAATTTAACAGGCAACATCCCAAAAGAGATAGGCAATATCACTACGCTCAAACT TATATTATTAAATGGAAATCAGCTCTCTGGTCTTTTACCAGATGAGATTGGCAACCTTCA AAGCTTAACAAGGTTACAGGTTGACCAAAACCATCTATCCGGCGCAATACCTAAATCATT TGCCAACTTAAGAAGTGTGAAGCATCTTCACATGAATAATAATTCATTAAGTGGGCAAAT CCCGTCCGAATTGTCCAGACTGAATACACTTTTGCACCTCCTTGTTGATAACAACAATTT GTCTGGGCCTCTTCCTCCAGAACTAGCTGCGGCAAAAAGCTTGAAAATACTTCAGGCTGA CAATAATAACTTCAGCGGGAGTTCCATCCCTACTCTGTATTACAACATGTCCGGACTATT TAAACTGAGTCTTCGAAACTGCAGTTTGCAGGGTGCTATTCCTGATCTGAGTGCCATACC TCAACTGGACTATTTGGATCTTAGCTGGAACCAGCTGACAGGATCTATCCCAACTAATAA GCTTGCTTCAAATATCACTACAATTGATTTGTCACATAACATGCTTAATGGAACTATTCC ATCGAACTTTTCAGGGCTTCCTTATCTTCAGCTATTGTCACTTAAAAATAATCTTTTAGA TGGTTCTGTTCCCTCGGAAATTTGGGCTGGCGTCAACCCTAACAGAAACGGAAGCCTTGT ACTGGACTTCCAAAATAATTCTCTCAATATGCTTCCAGCTGAAATTAGTCCTCCTCCACC AAATGTTACTGTCGTGTTATATGGAAATCCTATATGTGAGAATTCTAGTGAAACTCTGAT AATCAACCTTTGCCGCCTCCAGTCAATAAACCTGGAAAAATCTAAACAGGAAACAAGCAC TGCCATGGTTTGTGGAGCTTGCCCGACAGAAAAAAATTATGAGTACAATCCTTCATTCTC GGACCAATGTTTTTGTGCGGTGCCACTTGGAGTTGGACTTCGGTTGAAGAGTCCAGGAGT CACAGACTTTCATCCATACGAAAATGCTTTCAAGATTGACCTAACTTCTTTGTTGCAGTT GTTTCCTTACCAGCTATATATTGAGAACTACATATGGGAAGTTGGTCCAAGGCTAAATAT GCACCTAAAGTTATTTCCAAGCAATACAAGTTTGTTCAACATGTCTGAGGTTGTCCGACT CAGACACGTACTTGCTGGATGGGAAATTACACTTTTAGATGTATTTGGTCCATATGAGCT TCTCAATTTCACACTTGGTTCCTATGAAGATGAATATCCAAATCTAGCTTCATCAGGTTT AAGCAAAGCTGCACTGGGTGGTATCTTGGCAAGCACAATAGCTAGTGCTATTGCACTTTC TGCAGTAGTTACTGCTCTTATAATGAGAAGGAATTCAAGAACTAATAGAATTTCAAGACG TTCATTGTCGAGATTTTCTGTCAAAATTGATGGGGTCAGATGCTTCACATATGAAGAAAT GGCTTCTGCTACAAATAATTTTGATATGTCAGCTCAAGTTGGTCAAGGAGGTTATGGAAT AGTCTATAAAGGAATTCTAGCTGATGGAACAATTGTTGCAATCAAAAGGGCACACGAGGA TTCTCTTCAAGGTTCAACAGAGTTTTGCACAGAAATAGAGCTGTTGTCTAGATTGCATCA TCGCAATCTGGTTGCGTTGGTTGGTTACTGTGATGAAGAAAATGAACAGATGCTAGTTTA TGAATTCATGCCGAATGGCACTTTACGTGATCATCTTTCTGGAAAGTCCAAACCACCTCT CGGTTTTGGTTTGAGGCTGCACATTGCATTGGGTGCTTCAAAGGGAATTCTGTATCTCCA CACCGATGCAGATCCTCCTATATTTCACCGTGATGTTAAGGCCAGCAATATTTTGTTGGA TTCTAAATATGTCGCCAAGGTAGCTGACTTCGGTCTTTCGAGGCTTGCTCCAGTACCAGA TGTTGAAGGGGCTTTACCAGCTCATGTCTCCACCGTTGTTAAGGGCACCCCTGGGTATCT TGATCCAGAATACTTCCTAACTCATAAATTGACGGATAAAAGTGATGTGTACAGCCTTGG GGTTGTTTTTCTTGAATTGTTGACCGGGATGAAGCCTATTGAGCATGGTAAAAACATAGT GAGAGAGGTAAAAAAAGCTTACCGATCAGGCAATATATCTGAAATCATGGATACCCGGAT GGGCTTGTGTTCTCCAGAGTGTGTGGATAGCTTCCTCCAACTTGCAATGAAGTGCTCTCG GGATGAGACTGACGCTCGGCCATCCATGACAGAGATTGTTAGAGAACTTGAGCTCATCTT GAAGATAATGCCAGAGGGTGATCTTATCCAGCTGGAAACTCCACAGACATACTCAGGACG TGCTATGAGCAAGGACCCTATGAGTAAATCTACATCAAATTCAACAAATGGGAATTACTT GGCCTCATCTCAAACTTTTACTAGTGTTGATGCAAGTAGTAGCGGCGTGCTTTCTGGGAT GGTGAGTCCTCGGTAATGTTATGGTAGTTCTAAACATGCAGCAATACTCTGTAATATTAT GGACTTCACACTTTCATTTGTCAATGAACCAGCCAGCCTTGCTGGAAAATGCAATACATG ATAGTAACAATTGATAATGC