Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0480600-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:23622731:23627034:-1 gene:Os05g0480600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transposon protein CACTA, En/Spm sub-class. (Os05t0480600-01)
Sequence	ATGGAGGACCTGCTGGGCGCGGAGGTCGGCAAGAACGACTATGACTGGCTTCTTACTCCC CCTGGGACACCCCGTTGTCCTGTACTGGAGGTTGCTGAGAAAACACCATCCCCAAATATA TTACCTAAGCGCACTGCCACTAGATCATCGTCAACCACCAGAGCGTCGAGGCTTTCAGTA TCTCAAACAGAGAATGGTCATTCTACAGCTCCCACTAGACCAGCTAGAAGTAACTCTGTC ACTCGCCCTTCTATTCAGTCCACTCTCATGTCTAGCTCCAACAGGACAGCAGTTCTCAAT ACAAGCATTTCCTCCGTCAGCTCAAGACCTACAACCCCAAGTAGGCGAAGCAGCACTGTT GTTGCACCAAAGCAATCAATTGCAGCTTCACGCCCTGTTCCAGCAAGGTCCTCCACTCCT GTTAAAACTCGTCCATCTACACCAACCAAAACTCGCCCATCTACTCCTGTGAGAACTCGT CAAACAGCCAATTCTACAAGCGACTCAGCTGCTGCCAGGACCACATCCGCTCAAAATTCA AGGCCATCAACGCCAACCTCTAGATCACGTGCTATGCCCAATTCATCTTCTGGTGCAATT CCTGCAATGAGCCGCCCAGGTGCATCTACAATTTCTGCAACAAGTCGCTCAAATGCATCT ACAATATCTGCAACAAGCCGTCCTGGCTCATCCTCAAGTAATGTACCTGGGATAAGCCGT GCCACCTCATTGTCTTCAAGTACAGTTCCTTCAATGAGCCGCTCCAGCTCACGTTCATCC ACACCTACACGCCAGCCTGCAATGCGCTCATCGGCCCCTGCTGTTGGTCGCTCGCCTTCT GTTGGGCGGAGTTCTAGCATCAGTAGCTTGACATCATCTATCAATCGACCTGCAGCAAAT GGTGGCCGGAACTCAGCACCTTCATCGGCTCCGTCATCTCGTCCAAGTTCCCCTGGTCCA CGACCTCGAGCTCCAGTTCGTCCACTTGATATCCCTGATTTTCCAAATGAAACACCACCA AATCTTAGGACAAAACTGCCTGAACGGCCACTATCTGCTGGTAGATCACGGCCAGGCATG GCTTTAGGAGTAAGATCAACCTCAAATACTGAACCATCAGCTGCCTCAGCTCCTGTAAAG AAGGTGTCTGTGCCTGCTATGAGTCGAAGTAAATTTTCTGATGCACCATCCAGGACACCT ACTCTCACAAATGGACGCCAAAACAGACAGAGTGAGAGGTCTACTGTGGATAGTCAACCT AGTAAAGTCTCCAGGCCTGCCACAGGGACAGATAATGGATTTGGGATGACGATGTCAAAG AAGTCACTTGACATGGCAATCAGGCACATGGACATTCGGCAGAACTTGGGTGGAATCCGT GGCGCATCCCTCTTCCCGCATAGCATCCGCTCAACCGCCGGCAAGGGCAGGCCAGCTCGA ATGTCAGATCCTGGGCACACCATCTCAAACGGAGACCACCGGCACTACGCCGACAATGGC AGCACCAACGGGCACTTCTCCGGGGACTCCAATGGGGCTCTCTCGCGCAACGGTGGCAGC TCGACCGACTCACCCGACCGGGGAAGCATCGGAGGCAAGGAGACGCTGAGCGAGCTGGAC ATGTACGGCAGCTCGCGCTACGAGGCGATGCTGCTGAGGGAGGACGTGAGGAACACGAGC TGGCTGCACGGCTTCGACGACAGCAAGCCCGACCAGAGCCCACTGTTCGACCACCGGTTC GAGCCGCTCCCAGAGCCCTTCAGCCCGCTATGA

Peptide Sequence

PEP ID	Os05t0480600-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:23622731:23627034:-1 gene:Os05g0480600 transcript:Os05t0480600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transposon protein CACTA, En/Spm sub-class. (Os05t0480600-01)
Sequence	MEDLLGAEVGKNDYDWLLTPPGTPRCPVLEVAEKTPSPNILPKRTATRSSSTTRASRLSV SQTENGHSTAPTRPARSNSVTRPSIQSTLMSSSNRTAVLNTSISSVSSRPTTPSRRSSTV VAPKQSIAASRPVPARSSTPVKTRPSTPTKTRPSTPVRTRQTANSTSDSAAARTTSAQNS RPSTPTSRSRAMPNSSSGAIPAMSRPGASTISATSRSNASTISATSRPGSSSSNVPGISR ATSLSSSTVPSMSRSSSRSSTPTRQPAMRSSAPAVGRSPSVGRSSSISSLTSSINRPAAN GGRNSAPSSAPSSRPSSPGPRPRAPVRPLDIPDFPNETPPNLRTKLPERPLSAGRSRPGM ALGVRSTSNTEPSAASAPVKKVSVPAMSRSKFSDAPSRTPTLTNGRQNRQSERSTVDSQP SKVSRPATGTDNGFGMTMSKKSLDMAIRHMDIRQNLGGIRGASLFPHSIRSTAGKGRPAR MSDPGHTISNGDHRHYADNGSTNGHFSGDSNGALSRNGGSSTDSPDRGSIGGKETLSELD MYGSSRYEAMLLREDVRNTSWLHGFDDSKPDQSPLFDHRFEPLPEPFSPL

Transcript Sequence

Transcript ID	Os05t0480600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:23622731:23627034:-1 gene:Os05g0480600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transposon protein CACTA, En/Spm sub-class. (Os05t0480600-01)
Sequence	AGCTTTCACAAGGCAGCGTGAGGAGGAGGAGGAGGGGAGCTCAGCTCACGCAGAGGCGAC GACGACGCGCACGCGCACCGCCCTCCTCCCTCCCCGCGATCTCGCCGTAGGGGATCTCGT CGGCGGCGAGGAAGCAAAGGCCGAGGGGGCAGCGGCTGGGGAGGGGAGGGGAGGGGAGAG CGGCATTGGTTGGAGCTTGGAGGAAGTTGGGTGTGTGTGTCTGGGGGTGAGGGTGAGGGA TCGGATCGAAGCTTCTGGAAGGTTCCGGGCGCGGATCCGGCTCGGTGGGTTGCTCGCTCG TGGCTGGAGGTAGCGGCGCGCTGTTTGAGCGGGGGGAGCAACTCTGAGGTTTGGTTTTCC TGAGATGGAGGACCTGCTGGGCGCGGAGGTCGGCAAGAACGACTATGACTGGCTTCTTAC TCCCCCTGGGACACCCCGTTGTCCTGTACTGGAGGTTGCTGAGAAAACACCATCCCCAAA TATATTACCTAAGCGCACTGCCACTAGATCATCGTCAACCACCAGAGCGTCGAGGCTTTC AGTATCTCAAACAGAGAATGGTCATTCTACAGCTCCCACTAGACCAGCTAGAAGTAACTC TGTCACTCGCCCTTCTATTCAGTCCACTCTCATGTCTAGCTCCAACAGGACAGCAGTTCT CAATACAAGCATTTCCTCCGTCAGCTCAAGACCTACAACCCCAAGTAGGCGAAGCAGCAC TGTTGTTGCACCAAAGCAATCAATTGCAGCTTCACGCCCTGTTCCAGCAAGGTCCTCCAC TCCTGTTAAAACTCGTCCATCTACACCAACCAAAACTCGCCCATCTACTCCTGTGAGAAC TCGTCAAACAGCCAATTCTACAAGCGACTCAGCTGCTGCCAGGACCACATCCGCTCAAAA TTCAAGGCCATCAACGCCAACCTCTAGATCACGTGCTATGCCCAATTCATCTTCTGGTGC AATTCCTGCAATGAGCCGCCCAGGTGCATCTACAATTTCTGCAACAAGTCGCTCAAATGC ATCTACAATATCTGCAACAAGCCGTCCTGGCTCATCCTCAAGTAATGTACCTGGGATAAG CCGTGCCACCTCATTGTCTTCAAGTACAGTTCCTTCAATGAGCCGCTCCAGCTCACGTTC ATCCACACCTACACGCCAGCCTGCAATGCGCTCATCGGCCCCTGCTGTTGGTCGCTCGCC TTCTGTTGGGCGGAGTTCTAGCATCAGTAGCTTGACATCATCTATCAATCGACCTGCAGC AAATGGTGGCCGGAACTCAGCACCTTCATCGGCTCCGTCATCTCGTCCAAGTTCCCCTGG TCCACGACCTCGAGCTCCAGTTCGTCCACTTGATATCCCTGATTTTCCAAATGAAACACC ACCAAATCTTAGGACAAAACTGCCTGAACGGCCACTATCTGCTGGTAGATCACGGCCAGG CATGGCTTTAGGAGTAAGATCAACCTCAAATACTGAACCATCAGCTGCCTCAGCTCCTGT AAAGAAGGTGTCTGTGCCTGCTATGAGTCGAAGTAAATTTTCTGATGCACCATCCAGGAC ACCTACTCTCACAAATGGACGCCAAAACAGACAGAGTGAGAGGTCTACTGTGGATAGTCA ACCTAGTAAAGTCTCCAGGCCTGCCACAGGGACAGATAATGGATTTGGGATGACGATGTC AAAGAAGTCACTTGACATGGCAATCAGGCACATGGACATTCGGCAGAACTTGGGTGGAAT CCGTGGCGCATCCCTCTTCCCGCATAGCATCCGCTCAACCGCCGGCAAGGGCAGGCCAGC TCGAATGTCAGATCCTGGGCACACCATCTCAAACGGAGACCACCGGCACTACGCCGACAA TGGCAGCACCAACGGGCACTTCTCCGGGGACTCCAATGGGGCTCTCTCGCGCAACGGTGG CAGCTCGACCGACTCACCCGACCGGGGAAGCATCGGAGGCAAGGAGACGCTGAGCGAGCT GGACATGTACGGCAGCTCGCGCTACGAGGCGATGCTGCTGAGGGAGGACGTGAGGAACAC GAGCTGGCTGCACGGCTTCGACGACAGCAAGCCCGACCAGAGCCCACTGTTCGACCACCG GTTCGAGCCGCTCCCAGAGCCCTTCAGCCCGCTATGACGAATGCACGGTTGCCGCTGCCT GTAAATCTGCTGTTCCATGGTCTGCTTTGCAAGATGTGTATGCCATTCCATATGTTTTCT GTTTGGTTCTGTTTCAGGTTCTACACGCTCTTCCCTTGGGTACAATACTCTGCTGGTAAT ATTTTACTTTACCGATATAAGACGGAGAGATTGTGGGGTGTGGCTCATTTAATTTATCCC TGGAGTAGGGATTGGTTTCCACGTACTGTTGTACTGAGAATCCACAAGAGTATAGGAATT GATAAAAACAGTAAAGATTTGTAAGTTATTGTAATGCCATTGGTTTCTCATGG