Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0480200-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:23600961:23605047:-1 gene:Os05g0480200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:THIOREDOXIN H-TYPE 9 description:Thioredoxin domain 2 containing protein. (Os05t0480200-01)
Sequence

ATGGGTTGCTGTGGCAGCAGCACTGTAGACGCCGAGGAGCACCTGGACTACAGTGGCGGA
AATGTGACTTTGGTAACTGATCAAAAGAATTGGGACAATACAATGGAAGAAGTAGCTGAG
CATGGCAAAACAGTTGTGCTAAAATTCAGTGCAATTTGGTGCACTCCGTGTAGGAATGCT
GCCCCTCTATTCGCTGAACTTTCACTGAAGTATCCTGACATTGTTTTCGTGTCCGTGGAT
GTAGACGAAATGCCGGAGCTGGTGACGCAATACGATGTGCGTGCAACCCCAACGTTCATC
TTCATGAAAAACAATGAGGAGATTGATAAGCTTGTTGGAGGCAACCATGAAGATCTTCAG
GAAAAGTTCGAACAGCTTAACCGGCCAAAGTTATATGATGATGTATAA

Peptide Sequence

PEP ID

Os05t0480200-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:23600961:23605047:-1 gene:Os05g0480200 transcript:Os05t0480200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:THIOREDOXIN H-TYPE 9 description:Thioredoxin domain 2 containing protein. (Os05t0480200-01)
Sequence

MGCCGSSTVDAEEHLDYSGGNVTLVTDQKNWDNTMEEVAEHGKTVVLKFSAIWCTPCRNA
APLFAELSLKYPDIVFVSVDVDEMPELVTQYDVRATPTFIFMKNNEEIDKLVGGNHEDLQ
EKFEQLNRPKLYDDV

Transcript Sequence

Transcript ID

Os05t0480200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:23600961:23605047:-1 gene:Os05g0480200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:THIOREDOXIN H-TYPE 9 description:Thioredoxin domain 2 containing protein. (Os05t0480200-01)
Sequence

GCCATCCCCGTGCCACCCACCCCTCCGCCGGGGGCCGCCGCCGCCGCCGTCGACGCACGG
CCGACGTGCTCGGCGCAGAACCAAGCAGACGGCGAGCCAAACTTTTCTTGCCCTTTTGCT
CTTGCAGAGTGGAGCAGAGGACACTTGCATCTTGACGAATTTTCTCAAGTCGATGGGTTG
CTGTGGCAGCAGCACTGTAGACGCCGAGGAGCACCTGGACTACAGTGGCGGAAATGTGAC
TTTGGTAACTGATCAAAAGAATTGGGACAATACAATGGAAGAAGTAGCTGAGCATGGCAA
AACAGTTGTGCTAAAATTCAGTGCAATTTGGTGCACTCCGTGTAGGAATGCTGCCCCTCT
ATTCGCTGAACTTTCACTGAAGTATCCTGACATTGTTTTCGTGTCCGTGGATGTAGACGA
AATGCCGGAGCTGGTGACGCAATACGATGTGCGTGCAACCCCAACGTTCATCTTCATGAA
AAACAATGAGGAGATTGATAAGCTTGTTGGAGGCAACCATGAAGATCTTCAGGAAAAGTT
CGAACAGCTTAACCGGCCAAAGTTATATGATGATGTATAAGCATTTTTTTTTGGTTTGCT
GTCTAATTAAGAAATTGGTGAGCCAAATCAGTAGAATGAGCTCTCTGTCGAATCAAAGTA
CTGGATTGGCTGAAGAAACAGTTCAGAAATCTACATAGGTTGCAAGAAGCTGACCAACAG
AAGTAGGGATTTCTCAGTAGAGTTCAGTCCGAATACGGGCAGTAATTAAGTTAAGTTAGC
TAGTGTCTGCAAACTCTGCACCGCACTGTTCAAAGTGATTAACCTCATACAAAACAATGT
AATTATATATTACC