Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0478700-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:23536115:23539008:-1 gene:Os05g0478700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE 84 description:Hypothetical conserved gene. (Os05t0478700-00)
Sequence

ATGGCGAGGCGCCTGCCAAAGTCCGAGAGGTCGCCGTCGCCGCCGCCGCCGCCGCCCGGC
GACCAAAGGGACGCTGCCATCCAGGAGCTCAGCAAGGGCAGCGAGCTGGCGACGCAGCTC
ATGGCGCAGCTGGAGCTCATCCCGGAGCGGGAGCTCGACGGCCGCCGCGACGACGCGCTG
GCCAACGTGAGGAGCCTCTCCATGTCCCTCAGCTCCTCGCTCTACGCCCTCCGGTCCGAG
AGGAGGGAGCACTACTACTGCGGCTCCTCCTCCTCATCCGGCGGCGCTGGGCCAGCTGCT
GTCACCTCCGTCTCCGGCGCCGGCGGCGAAAGAAAGACGAAGCGCCGGCGAGGCAAGCAT
GGCGAGGAGCTCATCGAGACGGTATTCATTACTACGACACCAGAAAATGATGGGTTTCAC
TGGAGGAAATATGGCGAGAAGAATATCCTCAACAGTGAATTTCGAAAGTTATACTACAGA
TGTGGTTACAGTGATGAGCGAAAGTGTCAAGCAAAGAAATATGTGCAGCAAGAAAACAAC
AAACATCCCCCAGAGTTCAGGGTCACCCTCACCAACGAGCATACATGCAATACAGTGTTC
CAAGATCAGCCCAGTTCAAGCAGTACTAATTCCCAAGTGCTCGACTTCACAAAAGCATCC
ATTTCCTCATCATTAATGGATTCTCATGTCGGCGCGCCGATCTTGAAGGAAGAGGAAGAA
GAAGAAGTTCCCTCCATTGATGAGAGCACAAGAATCATGTCCACAATTATGCGTAACTAT
GGATCCTATGGCGACTATGATGAGTCGTCTCCGCAGCCATGGAATGGTGCCGGCTGGAAG
TGA

Peptide Sequence

PEP ID

Os05t0478700-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:23536115:23539008:-1 gene:Os05g0478700 transcript:Os05t0478700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE 84 description:Hypothetical conserved gene. (Os05t0478700-00)
Sequence

MARRLPKSERSPSPPPPPPGDQRDAAIQELSKGSELATQLMAQLELIPERELDGRRDDAL
ANVRSLSMSLSSSLYALRSERREHYYCGSSSSSGGAGPAAVTSVSGAGGERKTKRRRGKH
GEELIETVFITTTPENDGFHWRKYGEKNILNSEFRKLYYRCGYSDERKCQAKKYVQQENN
KHPPEFRVTLTNEHTCNTVFQDQPSSSSTNSQVLDFTKASISSSLMDSHVGAPILKEEEE
EEVPSIDESTRIMSTIMRNYGSYGDYDESSPQPWNGAGWK

Transcript Sequence

Transcript ID

Os05t0478700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:23536115:23539008:-1 gene:Os05g0478700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE 84 description:Hypothetical conserved gene. (Os05t0478700-00)
Sequence

GTCTCCACCTACTGAAGGGGTACACCTCAGCCAGCTAGCTGCGCTGCCCAATCTATCGAT
CCCCAATGGCGAGGCGCCTGCCAAAGTCCGAGAGGTCGCCGTCGCCGCCGCCGCCGCCGC
CCGGCGACCAAAGGGACGCTGCCATCCAGGAGCTCAGCAAGGGCAGCGAGCTGGCGACGC
AGCTCATGGCGCAGCTGGAGCTCATCCCGGAGCGGGAGCTCGACGGCCGCCGCGACGACG
CGCTGGCCAACGTGAGGAGCCTCTCCATGTCCCTCAGCTCCTCGCTCTACGCCCTCCGGT
CCGAGAGGAGGGAGCACTACTACTGCGGCTCCTCCTCCTCATCCGGCGGCGCTGGGCCAG
CTGCTGTCACCTCCGTCTCCGGCGCCGGCGGCGAAAGAAAGACGAAGCGCCGGCGAGGCA
AGCATGGCGAGGAGCTCATCGAGACGGTATTCATTACTACGACACCAGAAAATGATGGGT
TTCACTGGAGGAAATATGGCGAGAAGAATATCCTCAACAGTGAATTTCGAAAGTTATACT
ACAGATGTGGTTACAGTGATGAGCGAAAGTGTCAAGCAAAGAAATATGTGCAGCAAGAAA
ACAACAAACATCCCCCAGAGTTCAGGGTCACCCTCACCAACGAGCATACATGCAATACAG
TGTTCCAAGATCAGCCCAGTTCAAGCAGTACTAATTCCCAAGTGCTCGACTTCACAAAAG
CATCCATTTCCTCATCATTAATGGATTCTCATGTCGGCGCGCCGATCTTGAAGGAAGAGG
AAGAAGAAGAAGTTCCCTCCATTGATGAGAGCACAAGAATCATGTCCACAATTATGCGTA
ACTATGGATCCTATGGCGACTATGATGAGTCGTCTCCGCAGCCATGGAATGGTGCCGGCT
GGAAGTGATAGAGATCAACTGATCAGTTTTTCCCCACTGCTCTTCAGGTAGTACGTACGA
ACGTAATTTGCCAGTGATGAACTCATGGTGATCTAGATCTACCTAGTTTGGTACACATGC
AAGCAGCTTCCCTTGCAATTGCCAAATCACAATAATCATCTTTTTAAAGTTGTCGCGTAG
TATTAGTGAATTATTAGCTAGCTCTTGTTGTATTGTACCCAAAAACTTGGATTTTAATTT
GCAAGTGATTACTATATATAAGCTCCC