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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0477300-03
CDS Infomation

cds chromosome:IRGSP-1.0:5:23483080:23485770:-1 gene:Os05g0477300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein S26e domain containing protein. (Os05t0477300-03)
Sequence

ATGACCTTCAAGCGCAGGAACGGCGGCCGCAACAAGCATGGCCGCGGCCATGTGAAGTAC
ATCCGCTGCTCCAACTGCGCCAAGTGCTGCCCCAAGGACAAGGCCATCAAGAGGTTCCAG
GTGAGGAACATCGTCGAGCAGGCGGCCATCAGGGATGTCCAGGAGGCGTGCGTCCATGAC
GGATACGTCCTCCCGAAGCTGTACGCCAAGGTCCATCACTGCGTCTCCTGCGCCATCCAC
GCCCACATCGTCCGTGTCCGCTCCCGCGAGAACCGCAGGGACCGCAGGCCGCCGGAGAGG
TTCAGGCGCAGGGAGGATAGGCCTACTGGACCTCGCCCTGGTGGTGCTGGTGGACCTGGT
GCCCCTGCTGCTGCTGGACCTGGTGGCCCCCCTAATGTTGCTCGCACCTAA

Peptide Sequence

PEP ID

Os05t0477300-03
PEP Infomation

pep chromosome:IRGSP-1.0:5:23483080:23485770:-1 gene:Os05g0477300 transcript:Os05t0477300-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein S26e domain containing protein. (Os05t0477300-03)
Sequence

MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHD
GYVLPKLYAKVHHCVSCAIHAHIVRVRSRENRRDRRPPERFRRREDRPTGPRPGGAGGPG
APAAAGPGGPPNVART

Transcript Sequence

Transcript ID

Os05t0477300-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:23483080:23485770:-1 gene:Os05g0477300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein S26e domain containing protein. (Os05t0477300-03)
Sequence

CTAGTCGAGGAGAGCACCCAACCCCTGCGCCGCCACCTCCGATCGTCAGCCATGACCTTC
AAGCGCAGGAACGGCGGCCGCAACAAGCATGGCCGCGGCCATGTGAAGTACATCCGCTGC
TCCAACTGCGCCAAGTGCTGCCCCAAGGACAAGGCCATCAAGAGGTTCCAGGTGAGGAAC
ATCGTCGAGCAGGCGGCCATCAGGGATGTCCAGGAGGCGTGCGTCCATGACGGATACGTC
CTCCCGAAGCTGTACGCCAAGGTCCATCACTGCGTCTCCTGCGCCATCCACGCCCACATC
GTCCGTGTCCGCTCCCGCGAGAACCGCAGGGACCGCAGGCCGCCGGAGAGGTTCAGGCGC
AGGGAGGATAGGCCTACTGGACCTCGCCCTGGTGGTGCTGGTGGACCTGGTGCCCCTGCT
GCTGCTGGACCTGGTGGCCCCCCTAATGTTGCTCGCACCTAAACAGCCGTAGTCGCTCCT
TTGTTACTCTATATCATATCCTGTTAATGGCGCCATGGATATCATCGTTATGGTCTTTCA
TGAGGTCAAAGTCTTTCTTGGAACTAGCTTGTACTTTGCGATTGGCAGTGTGACAATGGA
AGTCTGAATTTTTGCCTGAGTTGTTTATCTATTTTAGACCGCTATCGTTGCTTTTTTGCT
AGTTATGCTTTTTTTTTCAAAATCTGAAGCTATTAATATGCTCATTTCTTGGGCTTTCAT
TATTACTATTCGAGTTGAAAACCTGTGATATGCAAGGTGCCTGGCCACTGTGCAGTGAAA
GCTGAATTGATTTTGAAATCTTGGCCAGTGCGACATTGTTTCAATTGGCAGTTGCTCGGT
TCGTATCTGTTATTCTGTTGTTTTCTACACAACCCCTTAGCATGATCAACTCAGGCTTGT
AAACCGGACAAGTTCGAAACTTTTCAATCTTATTCAATTTTGGGCG