Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0473900-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:23273472:23280905:-1 gene:Os05g0473900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Oryza miR164-targeted gene 8 description:Phytanoyl-CoA dioxygenase family protein. (Os05t0473900-01)
Sequence	ATGCTGCCGGCCGGTAGCCTCACCGACAAGCAGCTCCACTTCTTCGACGCCAATGGGTAC CTTGTGCTGGGGTCGTTCTCGAGCGCGGAGGAGGTGAAGGCAATGAGGGACCGCATGGCG GTGCTCATCGACGGCTTTGACGGCGCTGGCGACGTCTTCTCCACAAAGGATCATCGGCAG GTGAAGAATGACTTTTTCTTCAAGAGTGCGGAGAATATCTCTTTCTTCTTTGAGGAAAAG GCATTTGGAGATGATGGATGCTTGAAACAGGCAAAGGAACTTTCAATTAATAAAGTTGGG CACGCGTTACATGAACTTGACCCTGTGTTCAAAAAGTTCTCTTTTGGAGAGAATGTTTCC AGCCTATTCTCTTCTTTACGCTACAAAAGACCTGCAGTTATTCAATCTATGTACATCTTT AAGCAACCAGGCATTGGTGGCGAGGTGGTGCCACACCAGGATAATACATTCCTATATACA AACCCTCCATCATGCACAGGGTTGTGGCTTGCACTCGAAGATGCGACAAAAACGAATGGT TGCCTATGGGCAATTCCTGGATCACATAAAAATGGTCTGAAAAGGCGAATGATCAGAGAT GAAAATGATACTCATTTTGATCATCCTTCGCCAACCTATGATCTGAAAGAATTTGTGCCA TTAGAAGTAAAGTCAGGTGATTTGGTGGTTATTCATGGAGATCTTGTACACCAGAGCTTT GAAAATCTTTCTCTGGTGTCAAGACATGCACTGAGCTTACATGTAATTGATACCGAAGGA TGTGAATGGTCCAAACAAAACTGGTTACAAAGGAAAATCCCACCTCAGCCACTTTATGAA AATTAG

Peptide Sequence

PEP ID	Os05t0473900-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:23273472:23280905:-1 gene:Os05g0473900 transcript:Os05t0473900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Oryza miR164-targeted gene 8 description:Phytanoyl-CoA dioxygenase family protein. (Os05t0473900-01)
Sequence	MLPAGSLTDKQLHFFDANGYLVLGSFSSAEEVKAMRDRMAVLIDGFDGAGDVFSTKDHRQ VKNDFFFKSAENISFFFEEKAFGDDGCLKQAKELSINKVGHALHELDPVFKKFSFGENVS SLFSSLRYKRPAVIQSMYIFKQPGIGGEVVPHQDNTFLYTNPPSCTGLWLALEDATKTNG CLWAIPGSHKNGLKRRMIRDENDTHFDHPSPTYDLKEFVPLEVKSGDLVVIHGDLVHQSF ENLSLVSRHALSLHVIDTEGCEWSKQNWLQRKIPPQPLYEN

Transcript Sequence

Transcript ID	Os05t0473900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:23273472:23280905:-1 gene:Os05g0473900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Oryza miR164-targeted gene 8 description:Phytanoyl-CoA dioxygenase family protein. (Os05t0473900-01)
Sequence	TCCTCTCGGTCGCCGCCACAGCAGCCCCGATCCACGCCGCTGCCGCCAGACGCGCCCTTC TCCTCCCTCGCACGCCGCACGCCTCACCCTCACCGCCACCCCGCCGCCGCCGATCTACAC ACTCGCCGCCCCCGCCTCCGCTCCCACACGCCCTTCTCGCCCCTCGCGCACCGATCTCCG CTGTAGTTCTCCGCGCCGCCCCCGCTCTCCACCGCCCGAACACAGTCGCTCGCCTCGCCG GTCTCCACTCCGCCTCGTCATCCACTTCCACTCGCCCACCGCCGAAAGGTCAGCGTCACT GGAATTTAGGCTTTCAATAAAGATCTCCTAAGGCATATCAAGGCTCACGGGCAAGGGATC TCCCTCACAGATTCTTCAAGGAGGAGGGACTGCATACTCAGTATTGCCGTAGCGTGGTGC CGCCGCCCATCCTTGAGTATCCACCGTCACCGACTACCCTTCTCTGAGCGGGTGCAAATC CTGCCAATTGACCCCATCTCAGAACGTAGAGCCATGCGGTTCCGTGTAGTATTCCTGTAG TCCACTCCTGCAATCCACCCGCCCTCTGTTTTGTCAAACTTCTCATCTCCCCTTCCCTTC CGCCGCCATGCTGCCGGCCGGTAGCCTCACCGACAAGCAGCTCCACTTCTTCGACGCCAA TGGGTACCTTGTGCTGGGGTCGTTCTCGAGCGCGGAGGAGGTGAAGGCAATGAGGGACCG CATGGCGGTGCTCATCGACGGCTTTGACGGCGCTGGCGACGTCTTCTCCACAAAGGATCA TCGGCAGGTGAAGAATGACTTTTTCTTCAAGAGTGCGGAGAATATCTCTTTCTTCTTTGA GGAAAAGGCATTTGGAGATGATGGATGCTTGAAACAGGCAAAGGAACTTTCAATTAATAA AGTTGGGCACGCGTTACATGAACTTGACCCTGTGTTCAAAAAGTTCTCTTTTGGAGAGAA TGTTTCCAGCCTATTCTCTTCTTTACGCTACAAAAGACCTGCAGTTATTCAATCTATGTA CATCTTTAAGCAACCAGGCATTGGTGGCGAGGTGGTGCCACACCAGGATAATACATTCCT ATATACAAACCCTCCATCATGCACAGGGTTGTGGCTTGCACTCGAAGATGCGACAAAAAC GAATGGTTGCCTATGGGCAATTCCTGGATCACATAAAAATGGTCTGAAAAGGCGAATGAT CAGAGATGAAAATGATACTCATTTTGATCATCCTTCGCCAACCTATGATCTGAAAGAATT TGTGCCATTAGAAGTAAAGTCAGGTGATTTGGTGGTTATTCATGGAGATCTTGTACACCA GAGCTTTGAAAATCTTTCTCTGGTGTCAAGACATGCACTGAGCTTACATGTAATTGATAC CGAAGGATGTGAATGGTCCAAACAAAACTGGTTACAAAGGAAAATCCCACCTCAGCCACT TTATGAAAATTAGTACAAGCAGTTACCTATGTGTCAAATAAACGAGTGATGACCTAGAAG CAATGGTCAGACAATGTAAATACCTTGCTACTCTGTTTTCATGGATGTTTTTTATGGCAA TAAATTTGGTGTACGATGTTGAGTAGC