Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0473401-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:23251212:23254382:1 gene:Os05g0473401 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0473401-01);Hypothetical conserved gene. (Os05t0473401-02)
Sequence	ATGGATAAGATCGACTGCTACGTCGTGCCGCAGACCACGGGCACCGGCCGGAACATCTTC CAGGGCGGCAGCCCGCTCTCGGCGTCGCTGCCGCTGCTCGGCGTGCAGCTCGTCCTCATC GTCGCCGTCACCCGCGTCCTCTACTTCCTCCTCAAGCCGCTGAAGCAGCCCCGCGTCGTG TCCGAGATCATGGGCGGGATCATACTTGGGCCGTCCGTGCTGTCGCGGCACGCGGCGTTC AGGGAGGTGGTGTTCCCGGCGAGGGGCGAGCCGGTGCTGAACACGGTGGCGACGTTCGGG CTCATGTACGTCATCTTCCTCATCGGCGTGCGGATGGACCCGAGGCTCGTCGTCCGCTCC GGGAGGAAGGGCGTGGTCATCGGCCTCTCGGGCTTCCTCCTCCCGCTGGCCATGACCGGC GCGGGCTCCTCCGGCGAGGCCATGGCGACGGAGCCGGACGTGTCGAGGCGGTCCACGTTC TTGTTCGCGCTCGCCACCTCGCTGTCGGTCACGTCGTTCGCGGTGCTGTCGCCGATCCTG TCCGAGCTGAGCCTCCTCAACTCGGACCTCGGCCGCATCGCCATGTCGGCGTCGATGACC ACGGACGGCATCGCGTGGATCATCATGGTGGTGTACATCCTCGCCGAGGCGTTCCTCGTG TCGCCCGCCACGTCGATCTGGGCGTTCCTCTCGCTGGCGGTGCTCGCCGCGTTCATACTG TTCGTGGTGCGCCCCGTCGCGCTGCGGGTGATCGAGCGCACGCCGCCGGGCAAGCCGGTG GAGGAGACCTACGTGTTCGTCTTCCTCCTCGTCGTCCTCCTCGTCGGCTTCTACAGCGAC GTCATCGGGACGAACTCGTTCCACGGCGCGCTGATGCTGGGGCTGGCCATCCCCGACGGC CCGCCGCTCGGCACGGCGCTCGGCGAGAAGATCGAGGCGATGGTGTCCGGCCTGATCCTG CCGCTCTACTACGCCATGACCGGGCTCAGCACCGACGTGTGGCGCATGCACTGGGGCAGG CTGCAGGTCGTCATGTTCCTCGCCTGGGTCGGGAAGCTCGTCGGCGTCATGGTGTCGTCG CTGTACCTTGAGATCCCACTCCGCGACGCTGTCTCGCTCAGCCTCTTCATGAACTCCAAG GGCATCGTCGAGGTCATCACCTTCAACTTCTTCTTGACCAACAAGCTCATCGGCAAGAAC ACGTTCAGCATCCTGATCTGCTTGTCGGTGGCGATCACGGCGGTGTCGGTGCCGGTGGCC GGTTGGCTGTACGATCCGGCGCGGCGCTACGCCGTGTACAAGCGGCGCACGGTGCAGCAT CTCAAGGCGGACGCCGACCTGCGGATCCTCGCGTGCGTCCACGACCAGTCGCACGTCCCC GGCACGCTCGCCGTGCTCGAGGCGTCGAACGCGACGCCACAGACGCCGCTCAGCCTCTAC CTCCTCCAGCTCGTCGAGATCGCCGGCCGCTCCGCGCCGGTGTTCATCCCGCACAAGCTC CGCCACAGCGCCTCCCGAGCCGGCGCCGCGGCGGCCAGCGCGGCGCCGCCCACCGACTCC GACCGCATCATCAACGCCTTCTTCCAGTACGAGCTGAAGCACCCGGAGGGCGCCGTGTCC GTGCACCCCTTCACCACCATCTCCCCCTACTCCTCCATGCACGACGAGGTGTGCCGCCTG GCCGTCGAGAAGCGCACGTCGCTCATCCTCCTCCACTACCACAAGCGCCACATGCTCGCC GGCGGCGTGCGCGCCGCCGTGGGGCTCCGCGTCGTCAACCGCAAGGTGCTGGAGGTCGCG CCGTGCTCCGTCGCGGTGTTCGTCGACCGCAACGCCGGGAGCGTCGGCCTCTGCGCCTTC ATCCCGGGCCCGGTGCAAGACCAATCGACGTCCTCCAGGAGCAGGAGCGGCGGGCACGCG GCCAGCGGCAGCGGCCAAGGCTTCAAGGCGGCCGTCGCGTCGCTCTTCTTCGGCGGCGGC GACGACCGCGAGGCGCTGGCCTACGCGACGCGCATGGCGCGCCACGAGGGCGTGGCGGTG GGCGTGATCCGGTTCTTGCCGGCGCGGGGCATCAAGGACGAGCCGTCCGACCGCCGGATC GACAACCGCGCCATCGAGGAGGTGAAGGCGCTCGCGGCGAGGAGCAGGAACATCAAGGTC CAGGAGGAGCTCGTCGGCGACATGGAGAGGATCGTCCAGGTGCTGCGGGGGCTCGACGAG GCGGGCTACGACCTTGTGCTCGTCGGGATGCGGCACAGGTGGTACCCGGTGATGCCGGCG AACGGGATGTCGGATTGGAGCGAGTGCCCGGAGCTCGGCGTCATCGGCGACCTCCTCGCC TCGTCGGACTTCGACACGCCGTACTCGGTGCTCATCATGAAGCAGCAGGACCAGGGCGGG CTGAACGCCGCCGTGCCGGGCGCCCAGGACGTGTGGCACGTGAACGACGGCGGCGCCGAG GACGCGCCAGCGCCGCCAAGAAACATGTCAACCGCCGGATCTTAG

Peptide Sequence

PEP ID	Os05t0473401-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:23251212:23254382:1 gene:Os05g0473401 transcript:Os05t0473401-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0473401-01);Hypothetical conserved gene. (Os05t0473401-02)
Sequence	MDKIDCYVVPQTTGTGRNIFQGGSPLSASLPLLGVQLVLIVAVTRVLYFLLKPLKQPRVV SEIMGGIILGPSVLSRHAAFREVVFPARGEPVLNTVATFGLMYVIFLIGVRMDPRLVVRS GRKGVVIGLSGFLLPLAMTGAGSSGEAMATEPDVSRRSTFLFALATSLSVTSFAVLSPIL SELSLLNSDLGRIAMSASMTTDGIAWIIMVVYILAEAFLVSPATSIWAFLSLAVLAAFIL FVVRPVALRVIERTPPGKPVEETYVFVFLLVVLLVGFYSDVIGTNSFHGALMLGLAIPDG PPLGTALGEKIEAMVSGLILPLYYAMTGLSTDVWRMHWGRLQVVMFLAWVGKLVGVMVSS LYLEIPLRDAVSLSLFMNSKGIVEVITFNFFLTNKLIGKNTFSILICLSVAITAVSVPVA GWLYDPARRYAVYKRRTVQHLKADADLRILACVHDQSHVPGTLAVLEASNATPQTPLSLY LLQLVEIAGRSAPVFIPHKLRHSASRAGAAAASAAPPTDSDRIINAFFQYELKHPEGAVS VHPFTTISPYSSMHDEVCRLAVEKRTSLILLHYHKRHMLAGGVRAAVGLRVVNRKVLEVA PCSVAVFVDRNAGSVGLCAFIPGPVQDQSTSSRSRSGGHAASGSGQGFKAAVASLFFGGG DDREALAYATRMARHEGVAVGVIRFLPARGIKDEPSDRRIDNRAIEEVKALAARSRNIKV QEELVGDMERIVQVLRGLDEAGYDLVLVGMRHRWYPVMPANGMSDWSECPELGVIGDLLA SSDFDTPYSVLIMKQQDQGGLNAAVPGAQDVWHVNDGGAEDAPAPPRNMSTAGS

Transcript Sequence

Transcript ID	Os05t0473401-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:23251212:23254382:1 gene:Os05g0473401 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0473401-01);Hypothetical conserved gene. (Os05t0473401-02)
Sequence	GGGGGGCAAGAAGAGCCAGCGGCGCGGCGACCGCGCCATTGCCGGCGCGCGCAGTGGGGC GCGGATGCAGAGGAGGCAGACGCCGAGGAATCGTTGGGAATGGATAAGATCGACTGCTAC GTCGTGCCGCAGACCACGGGCACCGGCCGGAACATCTTCCAGGGCGGCAGCCCGCTCTCG GCGTCGCTGCCGCTGCTCGGCGTGCAGCTCGTCCTCATCGTCGCCGTCACCCGCGTCCTC TACTTCCTCCTCAAGCCGCTGAAGCAGCCCCGCGTCGTGTCCGAGATCATGGGCGGGATC ATACTTGGGCCGTCCGTGCTGTCGCGGCACGCGGCGTTCAGGGAGGTGGTGTTCCCGGCG AGGGGCGAGCCGGTGCTGAACACGGTGGCGACGTTCGGGCTCATGTACGTCATCTTCCTC ATCGGCGTGCGGATGGACCCGAGGCTCGTCGTCCGCTCCGGGAGGAAGGGCGTGGTCATC GGCCTCTCGGGCTTCCTCCTCCCGCTGGCCATGACCGGCGCGGGCTCCTCCGGCGAGGCC ATGGCGACGGAGCCGGACGTGTCGAGGCGGTCCACGTTCTTGTTCGCGCTCGCCACCTCG CTGTCGGTCACGTCGTTCGCGGTGCTGTCGCCGATCCTGTCCGAGCTGAGCCTCCTCAAC TCGGACCTCGGCCGCATCGCCATGTCGGCGTCGATGACCACGGACGGCATCGCGTGGATC ATCATGGTGGTGTACATCCTCGCCGAGGCGTTCCTCGTGTCGCCCGCCACGTCGATCTGG GCGTTCCTCTCGCTGGCGGTGCTCGCCGCGTTCATACTGTTCGTGGTGCGCCCCGTCGCG CTGCGGGTGATCGAGCGCACGCCGCCGGGCAAGCCGGTGGAGGAGACCTACGTGTTCGTC TTCCTCCTCGTCGTCCTCCTCGTCGGCTTCTACAGCGACGTCATCGGGACGAACTCGTTC CACGGCGCGCTGATGCTGGGGCTGGCCATCCCCGACGGCCCGCCGCTCGGCACGGCGCTC GGCGAGAAGATCGAGGCGATGGTGTCCGGCCTGATCCTGCCGCTCTACTACGCCATGACC GGGCTCAGCACCGACGTGTGGCGCATGCACTGGGGCAGGCTGCAGGTCGTCATGTTCCTC GCCTGGGTCGGGAAGCTCGTCGGCGTCATGGTGTCGTCGCTGTACCTTGAGATCCCACTC CGCGACGCTGTCTCGCTCAGCCTCTTCATGAACTCCAAGGGCATCGTCGAGGTCATCACC TTCAACTTCTTCTTGACCAACAAGCTCATCGGCAAGAACACGTTCAGCATCCTGATCTGC TTGTCGGTGGCGATCACGGCGGTGTCGGTGCCGGTGGCCGGTTGGCTGTACGATCCGGCG CGGCGCTACGCCGTGTACAAGCGGCGCACGGTGCAGCATCTCAAGGCGGACGCCGACCTG CGGATCCTCGCGTGCGTCCACGACCAGTCGCACGTCCCCGGCACGCTCGCCGTGCTCGAG GCGTCGAACGCGACGCCACAGACGCCGCTCAGCCTCTACCTCCTCCAGCTCGTCGAGATC GCCGGCCGCTCCGCGCCGGTGTTCATCCCGCACAAGCTCCGCCACAGCGCCTCCCGAGCC GGCGCCGCGGCGGCCAGCGCGGCGCCGCCCACCGACTCCGACCGCATCATCAACGCCTTC TTCCAGTACGAGCTGAAGCACCCGGAGGGCGCCGTGTCCGTGCACCCCTTCACCACCATC TCCCCCTACTCCTCCATGCACGACGAGGTGTGCCGCCTGGCCGTCGAGAAGCGCACGTCG CTCATCCTCCTCCACTACCACAAGCGCCACATGCTCGCCGGCGGCGTGCGCGCCGCCGTG GGGCTCCGCGTCGTCAACCGCAAGGTGCTGGAGGTCGCGCCGTGCTCCGTCGCGGTGTTC GTCGACCGCAACGCCGGGAGCGTCGGCCTCTGCGCCTTCATCCCGGGCCCGGTGCAAGAC CAATCGACGTCCTCCAGGAGCAGGAGCGGCGGGCACGCGGCCAGCGGCAGCGGCCAAGGC TTCAAGGCGGCCGTCGCGTCGCTCTTCTTCGGCGGCGGCGACGACCGCGAGGCGCTGGCC TACGCGACGCGCATGGCGCGCCACGAGGGCGTGGCGGTGGGCGTGATCCGGTTCTTGCCG GCGCGGGGCATCAAGGACGAGCCGTCCGACCGCCGGATCGACAACCGCGCCATCGAGGAG GTGAAGGCGCTCGCGGCGAGGAGCAGGAACATCAAGGTCCAGGAGGAGCTCGTCGGCGAC ATGGAGAGGATCGTCCAGGTGCTGCGGGGGCTCGACGAGGCGGGCTACGACCTTGTGCTC GTCGGGATGCGGCACAGGTGGTACCCGGTGATGCCGGCGAACGGGATGTCGGATTGGAGC GAGTGCCCGGAGCTCGGCGTCATCGGCGACCTCCTCGCCTCGTCGGACTTCGACACGCCG TACTCGGTGCTCATCATGAAGCAGCAGGACCAGGGCGGGCTGAACGCCGCCGTGCCGGGC GCCCAGGACGTGTGGCACGTGAACGACGGCGGCGCCGAGGACGCGCCAGCGCCGCCAAGA AACATGTCAACCGCCGGATCTTAGCAGGTTCAGGCAGTAGGCGATTGTTCTGTTCTAGCC TCTAGGACCTGGTTCAATGTAGACTTTCAGATTCCCTTTTTGCGTCCAAGTATGTTGTGA TGTATAGCTATCAGGATTAGCATCAATCCTTAAACTGAGATGAGATCTTAAGATTATTTC AAGGAAACAGCATTGTGTATAGCAGCAATGGAACAAATGCATCCAATGTTAATTTGACAA TTCAGTC