Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0471000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:23112893:23117182:-1 gene:Os05g0471000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ser-thr protein kinase (Fragment). (Os05t0471000-01)
Sequence	ATGGGGACGAGGAGGAGGAGGAATCCGGTGATATTCTTGTTCTTGTGGTTCGTCATGGCG TTTGAGCTGTGTGCATCTCTGAATCATGAAGGTGTCGCTCTTATGAGGTTTAAAGAGATG ATTGATGCTGACCCATTTGATGCTCTGTTGGATTGGGATGAAGGGAACGCCAGCCCCTGT TCTTGGTTCGGTGTGGAGTGCTCGGATGATGGTCGAGTTGTGGCCCTGAACTTACCAAAT CTTGGTCTAAAGGGTATGCTACCTCAGGAGATTGGAACACTTGCCCATATGCGTTCCATC ATTCTACACAATAACTCTTTCTATGGAATCATCCCCACAGAGATGAAATATTTACATGAG TTAAAGGTGTTGGATCTAGGATACAATACTTTCAGCGGACCATTTCCATCGGAGCTAAGA AATATTTTATCCCTGAAATTTCTCTTTCTCGAAGGCAACAAACTTTCTGGCAGTTTGCCA ATTGAATATGAGCTCGCCTCGATGGACCAGACTTCTTTAAATAAGATATCTACAGAAAGG AACGAAGAGAATGCCACAAGAAGAAAACTTCTAGCAAGCAAACAAAAACGTTCCCAAAAG AACAGGATGCTTTTGTCTGGAACATCTGAATCACCACTGGAAAATGTTACAATGCCAAAG TCTCACCCTGATAATATAACAGTGCCACATCGTCCCGTAGCTCCTCGATCAAGTTCTCCA CAGCCGCCACTCCCTTCCGAACCCATTCCCTCCCCTGCCCCTTCTATGCCCTCCCCTGCC CCTTCTGTATCCACCACTACAAACGGAACTTCAGGCCAAGAAAACAAGAGCAAGACAGCA ATATATGCATCCATCGGAGGAGTGGCCTGCTTGGTGGTTGTGGCCATGTCAGCTGCACTC ATCCTTTGTTACCGGCACAGGAAGACTAGTACTGTGGTACCTTTTTCTCCAACAGCAAGT GGGCAATTACATACTGCTACTTTGGGAGGAATAACTAAATTCAAACGCTCAGAGCTTGAA ACAGCCTGTGAAGGTTTCAGCAACATAATTGACACACTACCTAGATTCACATTGTATAAA GGAACTCTCCCGTGTGGAGCAGAAATAGCTGCTGTGTCTACATTGGTGACTTACGCAAGT GGGTGGACAACTGTAGCTGAAGCACAATTCAAGGATAAGGTTGAAGTCTTATCAAAAGTG AGCCATAAGAATTTAATGAACCTTGTGGGTTACTGTGAAGATGAAGAACCATTCACTCGG ATGATGGTGTTTGAGTATGTTTCAAATGGAACACTGTTTGAACACTTGCATGTTAAAGAA GCAGACCAATTAGACTGGCAGTCATGCTTACGGATAGCGATGGGAGTGATGTACTGTCTG AACTACATGCAACAGCTGAACCCTCCTGTACTGCTGAGAGACCTAAGTACTTCTTGCATA TACTTGACTGAAGACAATGCTGCAAAGGTTTCCGACATCAGTTTTTGGGGTGATAAAAAA GAAGACGAAAAATCTGAGGCTTCTGATGAGCACATCACAGTTTATAAGTTTGCTTTGCTT CTGCTTGAGACAATCTCTGGAAGGCGCCCATATTCTGATGATTATGGCCTCCTTATTCTT TGGGCACATAGATACCTCATTGGTGACAAACCCCTGATGGACATGGTTGACCCCACACTC AAATCAGTCCCTGAGGAGCAAGTCAGAGAACTCACAAAGCTGGTGAAATTATGCTTAAGT GAAGATCCCATGGAGAGGCCAACGGTGGCAGAGGTAACCGCATGGATGCAAGAGATCACT GGGATTTCTGAAGAAGAGGCGATTCCAAAAAATAGTCCGTTGTGGTGGGCTGAACTTGAG ATCATCACATCATAA

Peptide Sequence

PEP ID	Os05t0471000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:23112893:23117182:-1 gene:Os05g0471000 transcript:Os05t0471000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ser-thr protein kinase (Fragment). (Os05t0471000-01)
Sequence	MGTRRRRNPVIFLFLWFVMAFELCASLNHEGVALMRFKEMIDADPFDALLDWDEGNASPC SWFGVECSDDGRVVALNLPNLGLKGMLPQEIGTLAHMRSIILHNNSFYGIIPTEMKYLHE LKVLDLGYNTFSGPFPSELRNILSLKFLFLEGNKLSGSLPIEYELASMDQTSLNKISTER NEENATRRKLLASKQKRSQKNRMLLSGTSESPLENVTMPKSHPDNITVPHRPVAPRSSSP QPPLPSEPIPSPAPSMPSPAPSVSTTTNGTSGQENKSKTAIYASIGGVACLVVVAMSAAL ILCYRHRKTSTVVPFSPTASGQLHTATLGGITKFKRSELETACEGFSNIIDTLPRFTLYK GTLPCGAEIAAVSTLVTYASGWTTVAEAQFKDKVEVLSKVSHKNLMNLVGYCEDEEPFTR MMVFEYVSNGTLFEHLHVKEADQLDWQSCLRIAMGVMYCLNYMQQLNPPVLLRDLSTSCI YLTEDNAAKVSDISFWGDKKEDEKSEASDEHITVYKFALLLLETISGRRPYSDDYGLLIL WAHRYLIGDKPLMDMVDPTLKSVPEEQVRELTKLVKLCLSEDPMERPTVAEVTAWMQEIT GISEEEAIPKNSPLWWAELEIITS

Transcript Sequence

Transcript ID	Os05t0471000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:23112893:23117182:-1 gene:Os05g0471000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ser-thr protein kinase (Fragment). (Os05t0471000-01)
Sequence	TCTCCGCATTCTGTTTTCTACTATTCGCTAGTATACTGCTACTAGTTCTTCTTCTTCTTC TTCTGTCTGATCCACCAGCAAGGTTAGGTTAGGCTTCTTCTTGAGCAAGCGATTCGGGGT AGTTGAGCTGGTTGCAACCCCGCTTTGTTGATTCGTTCTTTGGCGGCAAATTCGATATTC TGTTTCGCTCCCCCCTGGGTTTCTGCTTGGAATTTAGGGGGTCACGAGAGCAAACCACGC GGTCCCGTTCTTGAATTGCTGGAGAGGGGTGGGGAAGAAAGATCGGGGGAAGAGGGGACG CGAGCTCAGCGGGCTTTGGTGCTTAAGTTCTTTCGGGTTTGTGTTCTTGTGAAGTTCCTC TGGCATGGGGACGAGGAGGAGGAGGAATCCGGTGATATTCTTGTTCTTGTGGTTCGTCAT GGCGTTTGAGCTGTGTGCATCTCTGAATCATGAAGGTGTCGCTCTTATGAGGTTTAAAGA GATGATTGATGCTGACCCATTTGATGCTCTGTTGGATTGGGATGAAGGGAACGCCAGCCC CTGTTCTTGGTTCGGTGTGGAGTGCTCGGATGATGGTCGAGTTGTGGCCCTGAACTTACC AAATCTTGGTCTAAAGGGTATGCTACCTCAGGAGATTGGAACACTTGCCCATATGCGTTC CATCATTCTACACAATAACTCTTTCTATGGAATCATCCCCACAGAGATGAAATATTTACA TGAGTTAAAGGTGTTGGATCTAGGATACAATACTTTCAGCGGACCATTTCCATCGGAGCT AAGAAATATTTTATCCCTGAAATTTCTCTTTCTCGAAGGCAACAAACTTTCTGGCAGTTT GCCAATTGAATATGAGCTCGCCTCGATGGACCAGACTTCTTTAAATAAGATATCTACAGA AAGGAACGAAGAGAATGCCACAAGAAGAAAACTTCTAGCAAGCAAACAAAAACGTTCCCA AAAGAACAGGATGCTTTTGTCTGGAACATCTGAATCACCACTGGAAAATGTTACAATGCC AAAGTCTCACCCTGATAATATAACAGTGCCACATCGTCCCGTAGCTCCTCGATCAAGTTC TCCACAGCCGCCACTCCCTTCCGAACCCATTCCCTCCCCTGCCCCTTCTATGCCCTCCCC TGCCCCTTCTGTATCCACCACTACAAACGGAACTTCAGGCCAAGAAAACAAGAGCAAGAC AGCAATATATGCATCCATCGGAGGAGTGGCCTGCTTGGTGGTTGTGGCCATGTCAGCTGC ACTCATCCTTTGTTACCGGCACAGGAAGACTAGTACTGTGGTACCTTTTTCTCCAACAGC AAGTGGGCAATTACATACTGCTACTTTGGGAGGAATAACTAAATTCAAACGCTCAGAGCT TGAAACAGCCTGTGAAGGTTTCAGCAACATAATTGACACACTACCTAGATTCACATTGTA TAAAGGAACTCTCCCGTGTGGAGCAGAAATAGCTGCTGTGTCTACATTGGTGACTTACGC AAGTGGGTGGACAACTGTAGCTGAAGCACAATTCAAGGATAAGGTTGAAGTCTTATCAAA AGTGAGCCATAAGAATTTAATGAACCTTGTGGGTTACTGTGAAGATGAAGAACCATTCAC TCGGATGATGGTGTTTGAGTATGTTTCAAATGGAACACTGTTTGAACACTTGCATGTTAA AGAAGCAGACCAATTAGACTGGCAGTCATGCTTACGGATAGCGATGGGAGTGATGTACTG TCTGAACTACATGCAACAGCTGAACCCTCCTGTACTGCTGAGAGACCTAAGTACTTCTTG CATATACTTGACTGAAGACAATGCTGCAAAGGTTTCCGACATCAGTTTTTGGGGTGATAA AAAAGAAGACGAAAAATCTGAGGCTTCTGATGAGCACATCACAGTTTATAAGTTTGCTTT GCTTCTGCTTGAGACAATCTCTGGAAGGCGCCCATATTCTGATGATTATGGCCTCCTTAT TCTTTGGGCACATAGATACCTCATTGGTGACAAACCCCTGATGGACATGGTTGACCCCAC ACTCAAATCAGTCCCTGAGGAGCAAGTCAGAGAACTCACAAAGCTGGTGAAATTATGCTT AAGTGAAGATCCCATGGAGAGGCCAACGGTGGCAGAGGTAACCGCATGGATGCAAGAGAT CACTGGGATTTCTGAAGAAGAGGCGATTCCAAAAAATAGTCCGTTGTGGTGGGCTGAACT TGAGATCATCACATCATAAAAAGCCAGTTCATTGCGCAATATTATTGCTGCGGCAACGGT GTCCATTCTTGCCTAGATCACAGCAAATTGTACAGTCGTTTAGGACCCATTTTGGGCAGG CAATTCAGTTGTACAGATATGCCTGCACTGCTCACACCCATTCTTTCATTCTTTGGTTCA TGAAACACACATAATCTCTGAAGTCCACTAAACAGTTGTGACGAAAGCGAGGAGTATAAA TTTTCTACTAGTTTCTACACACAATTCCTGCACTGAACAGATTTGTTTGAACAGTTGAGT CTACTCAGAGATACCTGAAGTCTGATGGTTGATACTTGAT