Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0470700-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:23101746:23104091:1 gene:Os05g0470700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0470700-01)
Sequence	ATGGCCGCGGACGATGCCGCGCGGAGCAGCAGAAGGATGGATCTGAACCTCTACCTCGGC CTCCCCCGCGCCCCGCGCCTGCGCCGCCCCGATCTCGGCTCCGACCTCGCGCTCGGCACC CCGATGCTCTCCTCCTCGCCTTCCTCCTCGGCGGCCTCGGCCGACGCGCCGCCGCTGGAG ACGGAGCCGCTCCACCCGCCGTACTCACCGCCCCCCGCCGAGCTTGTGCGCCCCCCGACA CCTCTGCCCGAGCCGTACGACCCGTCGGCTCCCGAGGCGCACCCGCCCTACGTGCCGCCT CCCGTGCCGCCCCCGGAGGCGATACCTGAGCTCGCTGACGACCTTGAGTTCGGCTTCTCC CACCCGCCGCTTCTGCTGCGGCCCAGCGAGCTGCTTGGGTGGGTAGACCGGCCATCGTCG TCGACGGCCTCCTCTTCCTTCCGCCCGGAGCGTGTCGACCGCTACCGTCCCCCCGTGATC TGCCTGAATAGCCGCCAGAGTCGCTGCCTCCGTCCAAGACGGTTCAGGTCGGACCTTCCG CCTCTCGGCTCGGAGGCCCCTGCCCTGGAGAACGACGCTGCAGCACAACCGCCACCGCAA GAGCCTATGCAAGATACGGTTGAAGAGAACAAGGTGGTCGCCGATGGCGCTATCGTGGGT GCCTCAGAGGAGGAGCCAGCCGAACGTGGCAAGAGCGTTGCGATGTTTGAGTGCAACATC TGCTTCGAGATGGCTTCCGAGCCTGTGGTAACTTCGTGTGGACATCTCTTCTGCTGGCCT TGTTTGTACCAATGGCTGCATGTCCACTCAACTCACAAGGAGTGCCCTGTCTGCAAAGGC GAGGTCACTGAAGGGAACATCACTCCAATTTACGGGAGAGGGAATTCGACTTCGGACGCG GAAAAGAAGGTTGCGGAGGAGGGAAATGTATCAGGCCCTACAATCCCACCAAGGCCACAT GGCAATCGGCTCGAGAGCTTCCGGCAGAAATTCCACCATTTGCGCCCGATTTCTAGAAGG CTTGGCGAGGCACATGGGATATTGTCTTCTTGGAGGCGCATACTTGATCAGCAGATTATG AATAGTGTGAGTAGGTTTGAGGGGCCTCCTGAATCAACTGTCCAGGAAATGATTGATCAT GCTCATCATGCTAGCCGTTTAGGTCGAATTACTACTAGAATGAGGGCAAGGAGGTTGCAG AGGGAAGCCGAAAACTCTACATTTGTTGCTTCTTCTGCTGCGGAGAGTGGGCTGCCAGCA AACAGCACATCGGATCTGCCTAGGCGTAGCTCAAGTCCATTTTCCTCGGAAAGAATTGAT TTATTGCAACACTTTGTTGACCTTGCAAGCACGGAAAGATTGGCAAGCGCTGTGAGTGAC CTTAGAAGAATGGTTAGGCCGAGCCCTTATGGAGCATCAACTTCATCAAATCCACCAAAT CCACCAAATACCGAGCTGCTGCCAGTTGATGGGAATCATGTTGCCGTTGCACTAGCTGCA GATCAAGCTTCCAATTCAAGCACCATGGCTGTAATTCAGGAGGATGCTGCTTTTACTGAA AGCACAGGGGAACCAAGTAATGCAGGGTCTTCGAGATCCCTGAGGAGGAGAGGAAGAAAT GATGCCTTAGGTTCTTTGGATGTGGATGGTGTGGGACTACACCGGAACAAGAGAAGGCGG CTGAACTGA

Peptide Sequence

PEP ID	Os05t0470700-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:23101746:23104091:1 gene:Os05g0470700 transcript:Os05t0470700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0470700-01)
Sequence	MAADDAARSSRRMDLNLYLGLPRAPRLRRPDLGSDLALGTPMLSSSPSSSAASADAPPLE TEPLHPPYSPPPAELVRPPTPLPEPYDPSAPEAHPPYVPPPVPPPEAIPELADDLEFGFS HPPLLLRPSELLGWVDRPSSSTASSSFRPERVDRYRPPVICLNSRQSRCLRPRRFRSDLP PLGSEAPALENDAAAQPPPQEPMQDTVEENKVVADGAIVGASEEEPAERGKSVAMFECNI CFEMASEPVVTSCGHLFCWPCLYQWLHVHSTHKECPVCKGEVTEGNITPIYGRGNSTSDA EKKVAEEGNVSGPTIPPRPHGNRLESFRQKFHHLRPISRRLGEAHGILSSWRRILDQQIM NSVSRFEGPPESTVQEMIDHAHHASRLGRITTRMRARRLQREAENSTFVASSAAESGLPA NSTSDLPRRSSSPFSSERIDLLQHFVDLASTERLASAVSDLRRMVRPSPYGASTSSNPPN PPNTELLPVDGNHVAVALAADQASNSSTMAVIQEDAAFTESTGEPSNAGSSRSLRRRGRN DALGSLDVDGVGLHRNKRRRLN

Transcript Sequence

Transcript ID	Os05t0470700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:23101746:23104091:1 gene:Os05g0470700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0470700-01)
Sequence	CTTTCGCCTTCCCCCTCTTTCCTGATTCCCCACCTCCTCCCTCGCCGCCGCCGCCGCCGC TGACTCCCACCGCGACCGCCTCCCCCGCCGGCGCGGTTTCGGAGGAGGCCCGGCGCCTGC AGGAGGAGGAGGGAGGGAGGGAAGGAGGGCCTGGCCCGCCTCCGCCGCCGCTGCCTCGTG CGGTTCCCGACGCCGGCCGTACTGCGCAGCGCTCGCCCACGCCGCGCGCGCCGCGGTGGG GCATGGTGGTGAGGTGGGAGGGAGGGAGCTGGGGGTGTTGAGGCGGAGGGGGAGGAGGAG GAGGAGGAGGTGTGGTTAGTGCGACGGATGGCCGCGGACGATGCCGCGCGGAGCAGCAGA AGGATGGATCTGAACCTCTACCTCGGCCTCCCCCGCGCCCCGCGCCTGCGCCGCCCCGAT CTCGGCTCCGACCTCGCGCTCGGCACCCCGATGCTCTCCTCCTCGCCTTCCTCCTCGGCG GCCTCGGCCGACGCGCCGCCGCTGGAGACGGAGCCGCTCCACCCGCCGTACTCACCGCCC CCCGCCGAGCTTGTGCGCCCCCCGACACCTCTGCCCGAGCCGTACGACCCGTCGGCTCCC GAGGCGCACCCGCCCTACGTGCCGCCTCCCGTGCCGCCCCCGGAGGCGATACCTGAGCTC GCTGACGACCTTGAGTTCGGCTTCTCCCACCCGCCGCTTCTGCTGCGGCCCAGCGAGCTG CTTGGGTGGGTAGACCGGCCATCGTCGTCGACGGCCTCCTCTTCCTTCCGCCCGGAGCGT GTCGACCGCTACCGTCCCCCCGTGATCTGCCTGAATAGCCGCCAGAGTCGCTGCCTCCGT CCAAGACGGTTCAGGTCGGACCTTCCGCCTCTCGGCTCGGAGGCCCCTGCCCTGGAGAAC GACGCTGCAGCACAACCGCCACCGCAAGAGCCTATGCAAGATACGGTTGAAGAGAACAAG GTGGTCGCCGATGGCGCTATCGTGGGTGCCTCAGAGGAGGAGCCAGCCGAACGTGGCAAG AGCGTTGCGATGTTTGAGTGCAACATCTGCTTCGAGATGGCTTCCGAGCCTGTGGTAACT TCGTGTGGACATCTCTTCTGCTGGCCTTGTTTGTACCAATGGCTGCATGTCCACTCAACT CACAAGGAGTGCCCTGTCTGCAAAGGCGAGGTCACTGAAGGGAACATCACTCCAATTTAC GGGAGAGGGAATTCGACTTCGGACGCGGAAAAGAAGGTTGCGGAGGAGGGAAATGTATCA GGCCCTACAATCCCACCAAGGCCACATGGCAATCGGCTCGAGAGCTTCCGGCAGAAATTC CACCATTTGCGCCCGATTTCTAGAAGGCTTGGCGAGGCACATGGGATATTGTCTTCTTGG AGGCGCATACTTGATCAGCAGATTATGAATAGTGTGAGTAGGTTTGAGGGGCCTCCTGAA TCAACTGTCCAGGAAATGATTGATCATGCTCATCATGCTAGCCGTTTAGGTCGAATTACT ACTAGAATGAGGGCAAGGAGGTTGCAGAGGGAAGCCGAAAACTCTACATTTGTTGCTTCT TCTGCTGCGGAGAGTGGGCTGCCAGCAAACAGCACATCGGATCTGCCTAGGCGTAGCTCA AGTCCATTTTCCTCGGAAAGAATTGATTTATTGCAACACTTTGTTGACCTTGCAAGCACG GAAAGATTGGCAAGCGCTGTGAGTGACCTTAGAAGAATGGTTAGGCCGAGCCCTTATGGA GCATCAACTTCATCAAATCCACCAAATCCACCAAATACCGAGCTGCTGCCAGTTGATGGG AATCATGTTGCCGTTGCACTAGCTGCAGATCAAGCTTCCAATTCAAGCACCATGGCTGTA ATTCAGGAGGATGCTGCTTTTACTGAAAGCACAGGGGAACCAAGTAATGCAGGGTCTTCG AGATCCCTGAGGAGGAGAGGAAGAAATGATGCCTTAGGTTCTTTGGATGTGGATGGTGTG GGACTACACCGGAACAAGAGAAGGCGGCTGAACTGAGGCTCTCGGGCTGCAACTGCTCGT CTAATTTTCTTGGTTTGCTGTTCTCAGTTAGCCCTTTTCTCTCTTCGGGGACGTATCTTC TGGTTGTGATATAAAATTCTCTCTTCTACTTGTTTATTAGGTGCTGCTGAGTTCATTGCA AATGTATTCCTTCGGAGTCCCGACCTGTTTAATTTATATGCTTTTCCACGAGGCATGTAT ACTAAGGAAAGTGAGGGATTGTCATCAGGTGAATTTACTGGATTGTAAATTGCCTATGCA AATGTATTAGATGGAAATGATCTTGAGGTCAAATAATACATTGACACCTGAATCTCATTT GTTGAT