Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0470000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:23080871:23083749:-1 gene:Os05g0470000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 11 description:Domain of unknown function DUF231, plant domain containing protein. (Os05t0470000-01)
Sequence	ATGGGCCTCCCCGGCCGGCGCAACCCGTTGCTGAGCGCGAGGCGCGCGGCGGCGTCCCTC CGGAGGAGCAGACGGCTGCCCGTCTATGTCGCCGCAGTCTTCTTCGTCGCCTCCGTCCTC CTCATGTTCCGCGACGAGATCCTTTATCTGACGACGGCAAGGTCGCCGTCGTCGTCGTTG CCGACAACGGGAGGATCAGCCGGCGGCGCCGGGCTCGCCCGGAAGGAGGAGCTAGTATCT GTCAACAAGCCAGTCTTGCTTGGTCACGGCGGCAAACCGGAGAAGCACCACAGCGTGACG GAGAGGCACCGGCCGAAGGTCAGCGCGAAGAGGCGGCCGAACAAGAAGGCGGCCAAGGCG GCGAGGAAGAAGTTCATGGCGTCGCCGTCGGTCGCCGCCGGCGCCGAGGTGAACGTGCCG GAGACGTGCAACCTGTCCAAGGGCAAGTGGGTGTTCGACAACGCGACGTACCCGCTGTAC CGCGAGCAGGAGTGCGAGTACCTGACGGCGCAGGTGACGTGCACGCGGAACGGGCGGCGC GACGACGGCTACCAGAAGTGGCGGTGGCAGCCGAGGGACTGCGACCTCCCGCTCGCCTTC GACGCGAGGCTGTTCATGGAGCGGCTCCGCGGGAAGCGCCTCATGTTCGTCGGCGACTCG CTGAACCGCAACCAGTGGGAGTCCATGGTGTGCCTGGTGCGGCCGGCGCTGTCGCCGGGG AAGAGCTACGTGACGTGGTGGGACGGCCAGCGGGTCGTCCTCCACGCTTGGGAGTACAAC GCGACTGTGGAGTTCTACTGGGCGCCGTTCCTCGTCGAGTCCAACTCCGACGACCCCAAG GCGCACAGCATCCGGGACCGCGTCATCAAGCCCGAGGCGATCGCCGCGCACGCCGGCGAC TGGGTCGGCGTCGACTACCTCGTCTTCAACACGTACATCTGGTGGATGAACACGGTCAAC ATGAAAGTCGTGAGGCCGACGGGGAAGACGTGGGAGGAGTACGACGAGGTGGGTCGGATC GAGGCGTACAGGAGAGTGCTCGACACATGGGCGACCTGGGTGAACGACAACGTCGACCCG GCCCGCACGTCCGTGTTCTTCATGAGCGTCTCCCCTCTTCACATCAGCCCGGAGGCGTGG GGCAACCCGGGCGGGGTGCGGTGCGCGAAGGAGGACGCGCCGGTGCAGAACTGGCACGGC CCGCTGTGGCTGGGCACGGACTGGGACATGTTCCGCGCGGCGAGGAACGCGTCCCGCGCC GCGGGGCGCGTCCCGGTCACGTTCGTGGACGTGACGGCGATGTCGGAGCTCCGCAAGGAC GGGCACACGTCGGTGCACACCATCCGTCAGGGCCGCGTGCTGACGCCGGAGCAGCAGGCC GACCCGGCCACGTACGCGGACTGCATCCACTGGTGCCTCCCCGGCGTCCCCGACGTCTGG AACCTCATGCTCTACGCCCGTATCCTCTCCAGGCCGCCGGCGGCGGCCGGTCACGTGGCG TGA

Peptide Sequence

PEP ID	Os05t0470000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:23080871:23083749:-1 gene:Os05g0470000 transcript:Os05t0470000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 11 description:Domain of unknown function DUF231, plant domain containing protein. (Os05t0470000-01)
Sequence	MGLPGRRNPLLSARRAAASLRRSRRLPVYVAAVFFVASVLLMFRDEILYLTTARSPSSSL PTTGGSAGGAGLARKEELVSVNKPVLLGHGGKPEKHHSVTERHRPKVSAKRRPNKKAAKA ARKKFMASPSVAAGAEVNVPETCNLSKGKWVFDNATYPLYREQECEYLTAQVTCTRNGRR DDGYQKWRWQPRDCDLPLAFDARLFMERLRGKRLMFVGDSLNRNQWESMVCLVRPALSPG KSYVTWWDGQRVVLHAWEYNATVEFYWAPFLVESNSDDPKAHSIRDRVIKPEAIAAHAGD WVGVDYLVFNTYIWWMNTVNMKVVRPTGKTWEEYDEVGRIEAYRRVLDTWATWVNDNVDP ARTSVFFMSVSPLHISPEAWGNPGGVRCAKEDAPVQNWHGPLWLGTDWDMFRAARNASRA AGRVPVTFVDVTAMSELRKDGHTSVHTIRQGRVLTPEQQADPATYADCIHWCLPGVPDVW NLMLYARILSRPPAAAGHVA

Transcript Sequence

Transcript ID	Os05t0470000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:23080871:23083749:-1 gene:Os05g0470000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 11 description:Domain of unknown function DUF231, plant domain containing protein. (Os05t0470000-01)
Sequence	AGAAACCACACACGCGTAAACGACGACACGCGCGCCGGCGCCATGGGCCTCCCCGGCCGG CGCAACCCGTTGCTGAGCGCGAGGCGCGCGGCGGCGTCCCTCCGGAGGAGCAGACGGCTG CCCGTCTATGTCGCCGCAGTCTTCTTCGTCGCCTCCGTCCTCCTCATGTTCCGCGACGAG ATCCTTTATCTGACGACGGCAAGGTCGCCGTCGTCGTCGTTGCCGACAACGGGAGGATCA GCCGGCGGCGCCGGGCTCGCCCGGAAGGAGGAGCTAGTATCTGTCAACAAGCCAGTCTTG CTTGGTCACGGCGGCAAACCGGAGAAGCACCACAGCGTGACGGAGAGGCACCGGCCGAAG GTCAGCGCGAAGAGGCGGCCGAACAAGAAGGCGGCCAAGGCGGCGAGGAAGAAGTTCATG GCGTCGCCGTCGGTCGCCGCCGGCGCCGAGGTGAACGTGCCGGAGACGTGCAACCTGTCC AAGGGCAAGTGGGTGTTCGACAACGCGACGTACCCGCTGTACCGCGAGCAGGAGTGCGAG TACCTGACGGCGCAGGTGACGTGCACGCGGAACGGGCGGCGCGACGACGGCTACCAGAAG TGGCGGTGGCAGCCGAGGGACTGCGACCTCCCGCTCGCCTTCGACGCGAGGCTGTTCATG GAGCGGCTCCGCGGGAAGCGCCTCATGTTCGTCGGCGACTCGCTGAACCGCAACCAGTGG GAGTCCATGGTGTGCCTGGTGCGGCCGGCGCTGTCGCCGGGGAAGAGCTACGTGACGTGG TGGGACGGCCAGCGGGTCGTCCTCCACGCTTGGGAGTACAACGCGACTGTGGAGTTCTAC TGGGCGCCGTTCCTCGTCGAGTCCAACTCCGACGACCCCAAGGCGCACAGCATCCGGGAC CGCGTCATCAAGCCCGAGGCGATCGCCGCGCACGCCGGCGACTGGGTCGGCGTCGACTAC CTCGTCTTCAACACGTACATCTGGTGGATGAACACGGTCAACATGAAAGTCGTGAGGCCG ACGGGGAAGACGTGGGAGGAGTACGACGAGGTGGGTCGGATCGAGGCGTACAGGAGAGTG CTCGACACATGGGCGACCTGGGTGAACGACAACGTCGACCCGGCCCGCACGTCCGTGTTC TTCATGAGCGTCTCCCCTCTTCACATCAGCCCGGAGGCGTGGGGCAACCCGGGCGGGGTG CGGTGCGCGAAGGAGGACGCGCCGGTGCAGAACTGGCACGGCCCGCTGTGGCTGGGCACG GACTGGGACATGTTCCGCGCGGCGAGGAACGCGTCCCGCGCCGCGGGGCGCGTCCCGGTC ACGTTCGTGGACGTGACGGCGATGTCGGAGCTCCGCAAGGACGGGCACACGTCGGTGCAC ACCATCCGTCAGGGCCGCGTGCTGACGCCGGAGCAGCAGGCCGACCCGGCCACGTACGCG GACTGCATCCACTGGTGCCTCCCCGGCGTCCCCGACGTCTGGAACCTCATGCTCTACGCC CGTATCCTCTCCAGGCCGCCGGCGGCGGCCGGTCACGTGGCGTGACCGACCATATGTGTA CAGATACTGTTTGTTTGTTTGTTCGTTCGTTGATGGGTTGCCAGCTGCCTGCACGGTTAG TTTTAGTTTTTGCCTTTCGCTTTTGTTGCTTCTCGATTATTATTTTCTCATATGCGAGAT ATAAAGGAGGTGGTTGGTGGCGATCGAGGTGATTGATGGTCATGTGACGCAACATTCTTG ACCGGATTGTGTGGCACGAGTTAAGCGGGGAACATCTGCAGTAGTAGTAGTTACATGGTT GAAGGGGCGTGCGCCGTGGCGCGACGCGAATAAATGTCGTGTGACGGTGTGAGCGAGTAC CGTGTAGATAGAAGGGCAGAATAGATATTCCAACACTCAGATTTACACAGCTTATTACTT CTGTAATACTCCATGAAATTTGTTATTCTTTTATCAATACTAGAAAAATGCCCGTGCATT GTAACGGATAAATGCGTTGTTTTTTTTCCAGTGGTACGATCTATCAAGATCAGTT