Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0469600-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:23058815:23061529:1 gene:Os05g0469600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PYRUVATE DECARBOXYLASE 1 description:Similar to Pyruvate decarboxylase (Fragment). (Os05t0469600-01)
Sequence	ATGGAGCTTGCCCTGGTTGGCAACCCTTCGAATGGCGTGGCGAAGCCGTCGTGCAACTCC GTCGGCTCGCTGCCCGTCGTCAGCTCCAACGCCGTCATCAACCCGCCGGTGACCAGCGCG GCGGGCGCCACGCTCGGCAGGCACCTCGCGAGGCGCCTCGTGCAGATCGGCGCCACCGAC GTGTTCGCCGTCCCCGGGGACTTCAACCTCACCCTGCTCGACTACCTCATCGCCGAGCCC GGGCTCAAGCTCATCGGCTGCTGCAATGAGCTCAACGCCGGGTACGCGGCCGACGGCTAC GCCCGCGCCCGCGGCGTCGGCGCCTGCGCCGTCACGTTCACCGTCGGTGGCCTCAGCGTG CTCAACGCTATCGCCGGCGCCTACAGCGAGAACCTCCCCGTGATCTGCATCGTCGGCGGG CCCAACTCCAACGACTACGGCACCAACCGCATCCTGCACCACACCATCGGCCTCCCGGAC TTCTCACAGGAGCTCCGCTGCTTCCAGACCATCACCTGCTACCAGGCCGTCATTAACAAC CTCGACGACGCGCACGAGCAGATCGACACCGCCATCGCGACGGCGCTAAGGGAGAGCAAG CCCGTCTACATCAGCGTGGGCTGCAACCTGGCAGGCCTCTCCCACCCAACGTTCAGTCGC GAGCCAGTGCCACTATTCATCTCGCCAAGGCTGAGCAACAAGGCGAACTTGGAGTACGCC GTCGAAGCCGCGGCGGACTTCCTGAACAAGGCGGTGAAGCCGGTGATGGTCGGTGGGCCA AAGATCCGGGTGGCCAAGGCGAAGAAGGCGTTCGCCGGCATCGCGGAGTCGAGCGGGTAC CCGTTCGCGGTGATGCCGTCCGCAAAGGGCCTCGTGCCGGAGCACCACCCGCGGTTCATC GGCACGTACTGGGGCGCCGTGAGCACCACCTTCTGCGCCGAGATCGTCGAGTCCGCCGAC GCCTACCTCTTCGCCGGCCCAATCTTCAACGACTACAGCTCCGTCGGCTACTCCCTGCTG CTGAAGCGGGAGAAGGCCGTCATCGTGCAGCCTGACCGCGTGGTGGTCGGCAACGGCCCG GCGTTCGGCTGCATCCTCATGACGGAGTTCCTCGACGCGCTCGCCAAGCGCCTCGACCGC AACACGACGGCATACGACAACTACCGCCGCATCTTCATCCCCGACCGCGAGCCGCCCAAT GGCCAGCCCGACGAGCCACTCAGGGTCAACATCCTCTTCAAGCACATCAAGGAGATGCTG TCTGGCGACACCGCCGTCATCGCCGAGACCGGCGACTCGTGGTTCAACTGCCAGAAGCTC AGGCTCCCCGAGGGCTGCGGGTACGAGTTCCAGATGCAGTACGGCTCAATCGGTTGGTCC GTCGGCGCCACGCTCGGATACGCCCAGGCGGCCAAGGACAAGCGCGTCATCTCCTGCATC GGCGACGGAAGCTTCCAGATGACGGCGCAGGACGTGTCGACGATGCTGCGGTGCGGGCAG AAGAGCATCATCTTCCTCATCAACAACGGCGGGTACACCATCGAGGTGGAGATCCACGAC GGGCCGTACAACGTCATCAAGAACTGGGACTACACCGGCCTCATCGACGCCATCCACAAC TCTGACGGCAACTGCTGGACAAAGAAGGTCCGGACTGAGGAGGAGCTGATAGAGGCGATC GCGACGGCGACGGGCGCCAAGAAAGACTGCCTCTGCTTCATCGAGATCATCGTGCACAAA GATGACACGAGCAAAGAGCTTCTCGAGTGGGGATCCAGGGTCTCGGCTGCCAACAGCAGG CCGCCTAATCCCCAGTGA

Peptide Sequence

PEP ID	Os05t0469600-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:23058815:23061529:1 gene:Os05g0469600 transcript:Os05t0469600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PYRUVATE DECARBOXYLASE 1 description:Similar to Pyruvate decarboxylase (Fragment). (Os05t0469600-01)
Sequence	MELALVGNPSNGVAKPSCNSVGSLPVVSSNAVINPPVTSAAGATLGRHLARRLVQIGATD VFAVPGDFNLTLLDYLIAEPGLKLIGCCNELNAGYAADGYARARGVGACAVTFTVGGLSV LNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTITCYQAVINN LDDAHEQIDTAIATALRESKPVYISVGCNLAGLSHPTFSREPVPLFISPRLSNKANLEYA VEAAADFLNKAVKPVMVGGPKIRVAKAKKAFAGIAESSGYPFAVMPSAKGLVPEHHPRFI GTYWGAVSTTFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKREKAVIVQPDRVVVGNGP AFGCILMTEFLDALAKRLDRNTTAYDNYRRIFIPDREPPNGQPDEPLRVNILFKHIKEML SGDTAVIAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVISCI GDGSFQMTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLIDAIHN SDGNCWTKKVRTEEELIEAIATATGAKKDCLCFIEIIVHKDDTSKELLEWGSRVSAANSR PPNPQ

Transcript Sequence

Transcript ID	Os05t0469600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:23058815:23061529:1 gene:Os05g0469600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PYRUVATE DECARBOXYLASE 1 description:Similar to Pyruvate decarboxylase (Fragment). (Os05t0469600-01)
Sequence	GTCACAACTCACAGCCAAAACCTCGTACATTTTCAGCTAGCCACAAGCAACACAAGTCCA AGACAAGTCAAGCGTTCGCACCAAGTCAAACCGCGCCTCACTGCCACCTTCGTTTGCGCA CCATGGAGCTTGCCCTGGTTGGCAACCCTTCGAATGGCGTGGCGAAGCCGTCGTGCAACT CCGTCGGCTCGCTGCCCGTCGTCAGCTCCAACGCCGTCATCAACCCGCCGGTGACCAGCG CGGCGGGCGCCACGCTCGGCAGGCACCTCGCGAGGCGCCTCGTGCAGATCGGCGCCACCG ACGTGTTCGCCGTCCCCGGGGACTTCAACCTCACCCTGCTCGACTACCTCATCGCCGAGC CCGGGCTCAAGCTCATCGGCTGCTGCAATGAGCTCAACGCCGGGTACGCGGCCGACGGCT ACGCCCGCGCCCGCGGCGTCGGCGCCTGCGCCGTCACGTTCACCGTCGGTGGCCTCAGCG TGCTCAACGCTATCGCCGGCGCCTACAGCGAGAACCTCCCCGTGATCTGCATCGTCGGCG GGCCCAACTCCAACGACTACGGCACCAACCGCATCCTGCACCACACCATCGGCCTCCCGG ACTTCTCACAGGAGCTCCGCTGCTTCCAGACCATCACCTGCTACCAGGCCGTCATTAACA ACCTCGACGACGCGCACGAGCAGATCGACACCGCCATCGCGACGGCGCTAAGGGAGAGCA AGCCCGTCTACATCAGCGTGGGCTGCAACCTGGCAGGCCTCTCCCACCCAACGTTCAGTC GCGAGCCAGTGCCACTATTCATCTCGCCAAGGCTGAGCAACAAGGCGAACTTGGAGTACG CCGTCGAAGCCGCGGCGGACTTCCTGAACAAGGCGGTGAAGCCGGTGATGGTCGGTGGGC CAAAGATCCGGGTGGCCAAGGCGAAGAAGGCGTTCGCCGGCATCGCGGAGTCGAGCGGGT ACCCGTTCGCGGTGATGCCGTCCGCAAAGGGCCTCGTGCCGGAGCACCACCCGCGGTTCA TCGGCACGTACTGGGGCGCCGTGAGCACCACCTTCTGCGCCGAGATCGTCGAGTCCGCCG ACGCCTACCTCTTCGCCGGCCCAATCTTCAACGACTACAGCTCCGTCGGCTACTCCCTGC TGCTGAAGCGGGAGAAGGCCGTCATCGTGCAGCCTGACCGCGTGGTGGTCGGCAACGGCC CGGCGTTCGGCTGCATCCTCATGACGGAGTTCCTCGACGCGCTCGCCAAGCGCCTCGACC GCAACACGACGGCATACGACAACTACCGCCGCATCTTCATCCCCGACCGCGAGCCGCCCA ATGGCCAGCCCGACGAGCCACTCAGGGTCAACATCCTCTTCAAGCACATCAAGGAGATGC TGTCTGGCGACACCGCCGTCATCGCCGAGACCGGCGACTCGTGGTTCAACTGCCAGAAGC TCAGGCTCCCCGAGGGCTGCGGGTACGAGTTCCAGATGCAGTACGGCTCAATCGGTTGGT CCGTCGGCGCCACGCTCGGATACGCCCAGGCGGCCAAGGACAAGCGCGTCATCTCCTGCA TCGGCGACGGAAGCTTCCAGATGACGGCGCAGGACGTGTCGACGATGCTGCGGTGCGGGC AGAAGAGCATCATCTTCCTCATCAACAACGGCGGGTACACCATCGAGGTGGAGATCCACG ACGGGCCGTACAACGTCATCAAGAACTGGGACTACACCGGCCTCATCGACGCCATCCACA ACTCTGACGGCAACTGCTGGACAAAGAAGGTCCGGACTGAGGAGGAGCTGATAGAGGCGA TCGCGACGGCGACGGGCGCCAAGAAAGACTGCCTCTGCTTCATCGAGATCATCGTGCACA AAGATGACACGAGCAAAGAGCTTCTCGAGTGGGGATCCAGGGTCTCGGCTGCCAACAGCA GGCCGCCTAATCCCCAGTGATCTTGCTGCTCGTCTTCTCAGGACGCACACTCGAAATTGC TGGGCTGCCAATGTCTAAGATGTGCTGCTTATCATCGTCTGTGAATTAATTGTTTAACGC TTCTGTTTCTGTATCCATTCAAAATTTTCTTAGAGAAGAGGTTGAATTAGTACATGTCGA TGGGTGTTACCTATCCTATGATAATGTATGTAATTCAAATGCTTGGAATTAATGTTTTGT AAACCTACACTATATTGCGATGCAATAACATGGACGATTTGAAGG