Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0468700-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:23009282:23013425:1 gene:Os05g0468700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AMMONIUM TRANSPORTER 2;1 description:Ammonium transporter. (Os05t0468700-01)
Sequence

ATGGCGGCGGCGGGGGCGTACTCGGCGAGCCTACCGGCGGTGCCGGACTGGCTGAACAAG
GGGGACAACGCGTGGCAGCTGACGGCGTCGACGCTGGTGGGGATCCAGTCGATGCCCGGG
CTGGTGGTGCTGTACGGCAGCATCGTGAAGAAGAAGTGGGCGGTGAACTCGGCGTTCATG
GCGCTCTACGCCTACGCGTCGTCGCTGCTGGTGTGGGTGCTGGTCGGCTTCCGCATGGCG
TTCGGCGACCAGCTGCTGCCGTTCTGGGGCAAGGCCGGCGTGGCGCTGACCCAGAGCTAC
CTCGTCGGCCGCGCCACGCTGCCGGCCACCGCGCACGGCGCCATCCCGCGCACCGAGCCC
TTCTACCCGGAGGCCACGCTGGTGCTCTTCCAGTTCGAGTTCGCCGCCATCACGCTCGTC
CTCCTCGCCGGCTCCGTCCTCGGCCGCATGAACATCAAGGCCTGGATGGCCTTCACCCCG
CTCTGGCTCCTCCTCTCCTACACCGTCGGCGCCTTCAGCCTCTGGGGCGGCGGCTTCCTC
TACCGCTGGGGCGTCATCGACTACTCCGGCGGCTACGTCATCCACCTCTCCTCCGGCATC
GCCGGCTTCACCGCCGCCTACTGGGTGGGGCCAAGGCTGAAGAGCGACCGTGAGCGGTTC
TCACCGAACAACATCCTGCTGATGATCGCGGGCGGCGGGCTGCTGTGGATGGGGTGGGCC
GGGTTCAACGGCGGCGCGCCGTACGCCGCCAACATCGCGGCGTCGGTCGCCGTGCTCAAC
ACCAACGTCTGCGCCGCCACCAGCCTCCTCATGTGGACCTGCCTCGACGTCATCTTCTTC
CGCAAGCCGTCCGTCATCGGCGCCGTGCAGGGCATGATGACCGGCCTCGTCTGCATCACC
CCCGGCGCAGGGCTGGTGCAGACCTGGGCGGCCGTGGTAATGGGCATCTTCGCCGGCAGC
GTGCCGTGGTTCACCATGATGATCCTGCACAAGAAGTCAGCGCTGCTGATGAAGGTGGAC
GACACGCTCGCCGTGTTCCACACCCACGCCGTGGCGGGGCTCCTCGGCGGCATCCTCACG
GGCCTCCTGGCCACCCCGGAGCTCTTCTCCCTCGAGTCCACGGTGCCGGGACTCCGCGGC
GCGTTCTACGGCGGCGGTATCAAGCAGATCGGCAAGCAGCTCGGCGGCGCCGCGTTCGTG
ATCGCGTGGAACCTCGTGGTCACCACGGCCATCCTCCTCGGCATCGGCCTGTTCATCCCG
CTGCGGATGCCCGACGAGCAGCTCATGATCGGCGACGACGCGGCGCACGGCGAGGAGGCC
TACGCGCTGTGGGGCGACGGCGAGAAGTTCGACGCGACGCGGCACGACCTGTCGAGGGGC
GGCGGAGGCGGCGACAGGGACGGCCCCGCCGGCGAGCGCCTCTCCGCCCTAGGCGCCAGG
GGCGTCACCATCCAGCTCTAG

Peptide Sequence

PEP ID

Os05t0468700-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:23009282:23013425:1 gene:Os05g0468700 transcript:Os05t0468700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AMMONIUM TRANSPORTER 2;1 description:Ammonium transporter. (Os05t0468700-01)
Sequence

MAAAGAYSASLPAVPDWLNKGDNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFM
ALYAYASSLLVWVLVGFRMAFGDQLLPFWGKAGVALTQSYLVGRATLPATAHGAIPRTEP
FYPEATLVLFQFEFAAITLVLLAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLWGGGFL
YRWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFSPNNILLMIAGGGLLWMGWA
GFNGGAPYAANIAASVAVLNTNVCAATSLLMWTCLDVIFFRKPSVIGAVQGMMTGLVCIT
PGAGLVQTWAAVVMGIFAGSVPWFTMMILHKKSALLMKVDDTLAVFHTHAVAGLLGGILT
GLLATPELFSLESTVPGLRGAFYGGGIKQIGKQLGGAAFVIAWNLVVTTAILLGIGLFIP
LRMPDEQLMIGDDAAHGEEAYALWGDGEKFDATRHDLSRGGGGGDRDGPAGERLSALGAR
GVTIQL

Transcript Sequence

Transcript ID

Os05t0468700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:23009282:23013425:1 gene:Os05g0468700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AMMONIUM TRANSPORTER 2;1 description:Ammonium transporter. (Os05t0468700-01)
Sequence

GATCGATTCCCCTCTTCGAGCCCGTACCAATTATTAGCTAGTTTAACTCGTACGATGAAT
CACGCCGAAACACAATATAAATGGTGGAGTCGGCTCGCTGTCAAACGCGCGGGAGCTCGC
GCCACTTGTAATTTTTCGCGTCTCCTCTCGTCCGGCACAGCACAGGAGCGCGGACTTGAA
GACCTCAAGTAGCGATTCGTCCGTGCGGCGCGGCGCAAGAAGGGAAGGGAAGGGGACTAG
GGGAGGGCGAGATGGCGGCGGCGGGGGCGTACTCGGCGAGCCTACCGGCGGTGCCGGACT
GGCTGAACAAGGGGGACAACGCGTGGCAGCTGACGGCGTCGACGCTGGTGGGGATCCAGT
CGATGCCCGGGCTGGTGGTGCTGTACGGCAGCATCGTGAAGAAGAAGTGGGCGGTGAACT
CGGCGTTCATGGCGCTCTACGCCTACGCGTCGTCGCTGCTGGTGTGGGTGCTGGTCGGCT
TCCGCATGGCGTTCGGCGACCAGCTGCTGCCGTTCTGGGGCAAGGCCGGCGTGGCGCTGA
CCCAGAGCTACCTCGTCGGCCGCGCCACGCTGCCGGCCACCGCGCACGGCGCCATCCCGC
GCACCGAGCCCTTCTACCCGGAGGCCACGCTGGTGCTCTTCCAGTTCGAGTTCGCCGCCA
TCACGCTCGTCCTCCTCGCCGGCTCCGTCCTCGGCCGCATGAACATCAAGGCCTGGATGG
CCTTCACCCCGCTCTGGCTCCTCCTCTCCTACACCGTCGGCGCCTTCAGCCTCTGGGGCG
GCGGCTTCCTCTACCGCTGGGGCGTCATCGACTACTCCGGCGGCTACGTCATCCACCTCT
CCTCCGGCATCGCCGGCTTCACCGCCGCCTACTGGGTGGGGCCAAGGCTGAAGAGCGACC
GTGAGCGGTTCTCACCGAACAACATCCTGCTGATGATCGCGGGCGGCGGGCTGCTGTGGA
TGGGGTGGGCCGGGTTCAACGGCGGCGCGCCGTACGCCGCCAACATCGCGGCGTCGGTCG
CCGTGCTCAACACCAACGTCTGCGCCGCCACCAGCCTCCTCATGTGGACCTGCCTCGACG
TCATCTTCTTCCGCAAGCCGTCCGTCATCGGCGCCGTGCAGGGCATGATGACCGGCCTCG
TCTGCATCACCCCCGGCGCAGGGCTGGTGCAGACCTGGGCGGCCGTGGTAATGGGCATCT
TCGCCGGCAGCGTGCCGTGGTTCACCATGATGATCCTGCACAAGAAGTCAGCGCTGCTGA
TGAAGGTGGACGACACGCTCGCCGTGTTCCACACCCACGCCGTGGCGGGGCTCCTCGGCG
GCATCCTCACGGGCCTCCTGGCCACCCCGGAGCTCTTCTCCCTCGAGTCCACGGTGCCGG
GACTCCGCGGCGCGTTCTACGGCGGCGGTATCAAGCAGATCGGCAAGCAGCTCGGCGGCG
CCGCGTTCGTGATCGCGTGGAACCTCGTGGTCACCACGGCCATCCTCCTCGGCATCGGCC
TGTTCATCCCGCTGCGGATGCCCGACGAGCAGCTCATGATCGGCGACGACGCGGCGCACG
GCGAGGAGGCCTACGCGCTGTGGGGCGACGGCGAGAAGTTCGACGCGACGCGGCACGACC
TGTCGAGGGGCGGCGGAGGCGGCGACAGGGACGGCCCCGCCGGCGAGCGCCTCTCCGCCC
TAGGCGCCAGGGGCGTCACCATCCAGCTCTAGGCGCGCCACGCCACGCCACGCCGCGCCG
CGCCGCGGCCTGGCCTCTAATTACACGCGCGTTTGTACTGTTTTTGGACGTGTTATTGTT
TAGGAGTAGTGAAGTGAACCAACGATTGACTGCAAGGTGAAGGGTGAGAACGCGAGAGAC
CAGACCACTATAGTCTATAGTACATATGGATGCTGTAATGATGTTGATCCGAGTTCGTTT
TTCCAACACGATAAAGGCCGACATGCCTATTAAATT