Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0467700-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:22961331:22964437:1 gene:Os05g0467700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1618 domain containing protein. (Os05t0467700-01);Protein of unknown function DUF1618 domain containing protein. (Os05t0467700-02)
Sequence	ATGCTCCGCCTCCGCCGCCTCACCGGCGCCGTCTCCGGCGGCCTCGCCCGCTACCTCTCC ACGCGCGCCGCGTCGCCGGCGCGGCCCCCGTGGGCGCTGCTCCAGCTGTCGAAGATGGAC CGGTCCGGGGCGTCGTCGCAGCCGGGCGCGTCGCTCCACGCCGACTACCCGCCGTGCGTC TCCTACCTCACCTTCGCCGCCAGCTTCGTCGACCCCCGCCTCCGCCACGACGCCGAGTCC GAGATGTTCGGCACGGTCTCCACGGACGTCCGCGCCACGAGCGGCGACGGCCTCGTCCCC GTCCGCTTCTACGACTCCCGCAACCACCTCCCCACCGTCGGCAGCCGCGGCGGCGAGCCG ATGCGCGAGTGGGCCCTCGACGGCGTCGACCGCGACCCGGAGGTGACGCGGTTCATCTGC AACCCGCTCAGCGGCGAGATGTACCGCCTCCCCGACCTCAACGGCACGAAGAAGACCTCG AGGTACCTCCACTTCGGGCTCCTCACCCAGTCCGATGCCGGTCAGGGGCCGCCTGCTCGG TACGCGGTGGCGGAGCTCGACGGCAACCGCGAGGAAGACGGCCAGGGGTGGCTCGTGCGG CGATTTCTCTCGGATTCCGGGGAGTGGGACAAGCTGGTGGGCATGCCGTCCCCATTGCCA GCCAGGAGGACGGTCGACATCGACCAGGAGGTGGTGGCCTTCGGCGACCGGCTATGGTGG GTCGATGCGAGCTGGGGCGCCGTCACCATCGACCCCTTCAGCGACCGGCCGGAGCTCCGG TTCGTCGAGCTGCCCAAGGAGAGCGTGCTGCCTGACCTTGACGACGTGGTGATGCTAAGG GAGCTTGGCAAGTACAGGCGCATGGGGGTCAGCGAGGGCAAGCTCCGCTATGTCGAGGTG TCTTTGGGGAAGCAGTTCTTGATCAGGTCGTTCTCGCTCGCCGACGACGACGAGGGCGGC GACTCCTGGACGCTGGAGCACGAGGTGGCCTTCGGCCCGATCTGGAAGGATGAGCACCAC GCGTCGGTTCCCTTGGGTGGCATGCCAAGGATTGGGGCCATTGATCCACTGAACGCCAAC ATCGTGCACCTCATAGTTGGTGATCAGATGCTCAGCATAGACATGATTAAGGAGAGGGCG ATTGACAGTTCTCGTTTGGGTTGTGCTGACTTTCCCCTCCTGCCTTGTGTACTCCCACCG TGGCTTGAATCAAGCCAGATTCCTGAAGGGATCCATTGGAGCAAGAAGGCCAAGATGAAA AGCAATACTCCGTCATACTCAGACATGTCGGTTCATGTAGACATAGAACTGAAGAAGTGA

Peptide Sequence

PEP ID	Os05t0467700-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:22961331:22964437:1 gene:Os05g0467700 transcript:Os05t0467700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1618 domain containing protein. (Os05t0467700-01);Protein of unknown function DUF1618 domain containing protein. (Os05t0467700-02)
Sequence	MLRLRRLTGAVSGGLARYLSTRAASPARPPWALLQLSKMDRSGASSQPGASLHADYPPCV SYLTFAASFVDPRLRHDAESEMFGTVSTDVRATSGDGLVPVRFYDSRNHLPTVGSRGGEP MREWALDGVDRDPEVTRFICNPLSGEMYRLPDLNGTKKTSRYLHFGLLTQSDAGQGPPAR YAVAELDGNREEDGQGWLVRRFLSDSGEWDKLVGMPSPLPARRTVDIDQEVVAFGDRLWW VDASWGAVTIDPFSDRPELRFVELPKESVLPDLDDVVMLRELGKYRRMGVSEGKLRYVEV SLGKQFLIRSFSLADDDEGGDSWTLEHEVAFGPIWKDEHHASVPLGGMPRIGAIDPLNAN IVHLIVGDQMLSIDMIKERAIDSSRLGCADFPLLPCVLPPWLESSQIPEGIHWSKKAKMK SNTPSYSDMSVHVDIELKK

Transcript Sequence

Transcript ID	Os05t0467700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:22961331:22964437:1 gene:Os05g0467700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1618 domain containing protein. (Os05t0467700-01);Protein of unknown function DUF1618 domain containing protein. (Os05t0467700-02)
Sequence	AGTACACTACAGGCTACTACTACTACTACTACTACACCAAATCACCGCGACCTCCACCTC CACGCCTCCGCGCGCGATGCTCCGCCTCCGCCGCCTCACCGGCGCCGTCTCCGGCGGCCT CGCCCGCTACCTCTCCACGCGCGCCGCGTCGCCGGCGCGGCCCCCGTGGGCGCTGCTCCA GCTGTCGAAGATGGACCGGTCCGGGGCGTCGTCGCAGCCGGGCGCGTCGCTCCACGCCGA CTACCCGCCGTGCGTCTCCTACCTCACCTTCGCCGCCAGCTTCGTCGACCCCCGCCTCCG CCACGACGCCGAGTCCGAGATGTTCGGCACGGTCTCCACGGACGTCCGCGCCACGAGCGG CGACGGCCTCGTCCCCGTCCGCTTCTACGACTCCCGCAACCACCTCCCCACCGTCGGCAG CCGCGGCGGCGAGCCGATGCGCGAGTGGGCCCTCGACGGCGTCGACCGCGACCCGGAGGT GACGCGGTTCATCTGCAACCCGCTCAGCGGCGAGATGTACCGCCTCCCCGACCTCAACGG CACGAAGAAGACCTCGAGGTACCTCCACTTCGGGCTCCTCACCCAGTCCGATGCCGGTCA GGGGCCGCCTGCTCGGTACGCGGTGGCGGAGCTCGACGGCAACCGCGAGGAAGACGGCCA GGGGTGGCTCGTGCGGCGATTTCTCTCGGATTCCGGGGAGTGGGACAAGCTGGTGGGCAT GCCGTCCCCATTGCCAGCCAGGAGGACGGTCGACATCGACCAGGAGGTGGTGGCCTTCGG CGACCGGCTATGGTGGGTCGATGCGAGCTGGGGCGCCGTCACCATCGACCCCTTCAGCGA CCGGCCGGAGCTCCGGTTCGTCGAGCTGCCCAAGGAGAGCGTGCTGCCTGACCTTGACGA CGTGGTGATGCTAAGGGAGCTTGGCAAGTACAGGCGCATGGGGGTCAGCGAGGGCAAGCT CCGCTATGTCGAGGTGTCTTTGGGGAAGCAGTTCTTGATCAGGTCGTTCTCGCTCGCCGA CGACGACGAGGGCGGCGACTCCTGGACGCTGGAGCACGAGGTGGCCTTCGGCCCGATCTG GAAGGATGAGCACCACGCGTCGGTTCCCTTGGGTGGCATGCCAAGGATTGGGGCCATTGA TCCACTGAACGCCAACATCGTGCACCTCATAGTTGGTGATCAGATGCTCAGCATAGACAT GATTAAGGAGAGGGCGATTGACAGTTCTCGTTTGGGTTGTGCTGACTTTCCCCTCCTGCC TTGTGTACTCCCACCGTGGCTTGAATCAAGCCAGATTCCTGAAGGGATCCATTGGAGCAA GAAGGCCAAGATGAAAAGCAATACTCCGTCATACTCAGACATGTCGGTTCATGTAGACAT AGAACTGAAGAAGTGAATTTTATCAGCTTTTGATCTCATGGGTTTCTCAAAATTGACAGA CGAGGTTTTTCTGGAGAATTAGGAGGCGAATGGTGATGGTTTCTGACACACCTTGTGGGA ATGCTGTGAAAAGTTTGGGTTTTGGGGCTTTCCTGATGAACTTTGTGGCCCCTCATTTTG ACAAATTCTGGGAAACATTTTGCAACTTCTCTTAGCTATGCACGAGCCATGTTTATTATT ATTTCAGTGAAATGACTTGATTCCATCGCCAGTTGAGCTTTGAACCGCAGTCTAGAACAA CACATACAACGATTACATTTTTGCATCATGCATATGCTCCTTATATCTAAGTTTTCTTCG ATGTTATGTGTTCATCATTC