Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0466200-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:22878707:22881780:-1 gene:Os05g0466200 gene_biotype:protein_coding transcript_biotype:protein_coding description:KIP1-like domain containing protein. (Os05t0466200-01)
Sequence

ATGCTTCAGCGCGCGGCGAGCAACGCCTACTCCTGGTGGTGGGCGTCGCACATCCGCACC
ACCCAGTCCAAGTGGCTCGACACCACCCTCCACGAGATGGAGGACAGGGTGAAGGCCATG
CTCAACCTCATCGGAGCGGACGGCGACTCGTTCGGCAAGAAGGCGGAGCTCTACTTCAAG
AGCCGGCCCGAGCTCATCAACCACGTCGAGGAGATGTTCAGGTCCTACCAGGCGCTGGCT
GACCGCTATGACCGGATATCCAGCGAGCTGCACAAGGCCAACCACACCATTGCCACAGCG
TTCCCGGACCAGATCCAATTCTCCATGCAAGATGCCGATGGGGAAGGATTCCAGAAGGCG
ATATCCGGGATCGATCTCAGCAACTTCAAATTTCCTGCGCTGGAAGGTTTGCCAATGGGG
TCACGCGGCGCTAGCCGGGGAACCAGCCCGGTCCCGAAGAGGACCCAGATGCACCGGAGG
ATCACCTCCCACATGAACAAGGAAAATGCACAGGAGGAGATCGACAAGCTGCAAAAGCAA
ATCCTGGTGCTGCAGACTGAGAAGGAGTTCTTGAAGACCTCTTATGACAGCGCGCTGGGC
AGGTATCTGGACATTGAGAAGCAGGTGGTGGAGTTGCAGGATGAAGTTTGCAGCTTGCAG
GATGCTTTTAGCACTGGCGCGGCCATTGAAGACAATGAAGCCCGGGCATTGATGGCTGCA
CGAGCCATTGTGTCTTGCGAGGATACATTGGTTAATTTACAGGACCAGCAACGTAGATCA
TCTGAAGAGGCAAGAACTGAGTTTAAACGATTCATTGAAGCAAAGAAGAAGCTTGATACC
TTCAAAGCTGAGTGTGGGCAGCCTCATACGCAAAATGATGAACCTGATAACAGTGACAAA
GAATACATCCATGCAATGCCATCTGGGGATGTTGATGATTCTGTTCAGAATGAGATCAGG
TTTGACCTGCAGGAAGTATGCCAAAAGGTCAAAGAACTAATTGAATTGCACCCAGGGGTA
TCGGTCACTGATTTAGCAGATAAGGTTGACCGACTTGTGGAGAAGGTAATCGACCTAGAG
CTTGCTACCACTTCACAGAATGCTCAGATCAATAGAATGAAGACTGAGATAGACGACCTT
CACAAGTGCCTGCAAGCCTTGGAGGAAGAGAAGTCGGCTTTGGTTGCTGATTCCAGTAAG
CTGGTAGACAGATTGAAGCAAGTTGAAGAGGTTTTGCAAGCAGTCCAACATCTTGGAAAC
TCCATACAAAATGGGACACAGAATATTCATAAAGAAATGAATGCAGCCTGCAGTGAACTT
GCTGAATTTGTAGAAAAATTACATGAACCTGAGCCCCAAAACAGTGGTTTCATGAATTCA
TCCCAAGAGTCAAGTTGTCAAGAAGAAGATTCAGAGGTAACAAGTCAGTATGCCAAGAAA
CAAACATCCGACTCAATAGATGGTTCAAAGAATGAAGTGGAGAAACAAGATAAAGGCTCC
GAGGGTCCTTTGGTGCAGCAACATCCTGACACAAATGGATCTGATGGTGAGGACAAGATT
TTATTAGAGGGGTATGCATCTGTCCTTCAGAGCTACAAGGGTACAGAGCAAAAGCTGTCA
GAAATTGAGAAGACAAATCAAGAGTACCATTCAAGGTCAATGTCAGAGCTGAAGGATCTG
AAGAGTGCCAATGCAATGAAAGATGAGGAGATTCACTCTCTTCGGCGCATGCTAAGTTCT
TTGCAGAGAAAGATGAATGCCCCTGCTCCTGAGAATGTGGACAAGTCTGAAGAAACTTCC
AAAATAAGCACCACTCCTGTCACCGAAGACAAAGAGATTGCAGAAATAGAGGAGTACATG
AAGCAATGCCAAGTTGAAGAGCAACTTGCTTCGTCAATTTCCGAGGAAAAATTTAGAGCA
GAGATTGACAGGGTGTTGGAGAATAACTTGGGGTTTTGGTTGAGGTTTAGCACATCATAT
CATCAAATACGGAATTTCCAAACATCATTTGACAAGCTAAAAACTGAGATGGATAAATTG
ATTGATGCACAGGCACAGTGTGGTGCAGATGGAGTTCCTATCAGTTATCAGGTAGCAAAG
CTGGAGTCAGCTGTTCTAGAAAAAAAATTCCGGGATTTGAACACAGATCTTCAAGTTTGG
ATAGAAAAAAATGTGCTATTAAAAGGAGAACTAGAGAACAGGTTCTCATCACTCTGTGGC
ATACAAGAGGAGATATCAAAGATCGCAACTCTGGATAAAAGCGATGAAGTTCACTTCACC
CCTTTCCAAGCTGCAAAACTCCAAGGAGAGGTGCTTAATATGAAACAAGAGAATAACAAA
GTCGCTAAAGAGCTAGAAGCTGGGCTGGACCATGTAAGAGGTCTCCAAGTGGAGGTTGGC
AGGGTGCTCTTGAAGCTCCGAGAAAATCTTGAATTATCTATAGCAAGAAGCAACCGAGCT
CAGCAAAACTTCCGTAACCTGTCAACGAAAGCTGGAGTTCCCCTTAGAACTTTCCTGTTC
GGCACGAAGCCAAAGAAACCATCACTCTTTTCATGCATGGGTCCTGGGGTGCATAAGCAT
CACAGTGGCTCAAGGGCTGGTCGTAGATGA

Peptide Sequence

PEP ID

Os05t0466200-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:22878707:22881780:-1 gene:Os05g0466200 transcript:Os05t0466200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:KIP1-like domain containing protein. (Os05t0466200-01)
Sequence

MLQRAASNAYSWWWASHIRTTQSKWLDTTLHEMEDRVKAMLNLIGADGDSFGKKAELYFK
SRPELINHVEEMFRSYQALADRYDRISSELHKANHTIATAFPDQIQFSMQDADGEGFQKA
ISGIDLSNFKFPALEGLPMGSRGASRGTSPVPKRTQMHRRITSHMNKENAQEEIDKLQKQ
ILVLQTEKEFLKTSYDSALGRYLDIEKQVVELQDEVCSLQDAFSTGAAIEDNEARALMAA
RAIVSCEDTLVNLQDQQRRSSEEARTEFKRFIEAKKKLDTFKAECGQPHTQNDEPDNSDK
EYIHAMPSGDVDDSVQNEIRFDLQEVCQKVKELIELHPGVSVTDLADKVDRLVEKVIDLE
LATTSQNAQINRMKTEIDDLHKCLQALEEEKSALVADSSKLVDRLKQVEEVLQAVQHLGN
SIQNGTQNIHKEMNAACSELAEFVEKLHEPEPQNSGFMNSSQESSCQEEDSEVTSQYAKK
QTSDSIDGSKNEVEKQDKGSEGPLVQQHPDTNGSDGEDKILLEGYASVLQSYKGTEQKLS
EIEKTNQEYHSRSMSELKDLKSANAMKDEEIHSLRRMLSSLQRKMNAPAPENVDKSEETS
KISTTPVTEDKEIAEIEEYMKQCQVEEQLASSISEEKFRAEIDRVLENNLGFWLRFSTSY
HQIRNFQTSFDKLKTEMDKLIDAQAQCGADGVPISYQVAKLESAVLEKKFRDLNTDLQVW
IEKNVLLKGELENRFSSLCGIQEEISKIATLDKSDEVHFTPFQAAKLQGEVLNMKQENNK
VAKELEAGLDHVRGLQVEVGRVLLKLRENLELSIARSNRAQQNFRNLSTKAGVPLRTFLF
GTKPKKPSLFSCMGPGVHKHHSGSRAGRR

Transcript Sequence

Transcript ID

Os05t0466200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:22878707:22881780:-1 gene:Os05g0466200 gene_biotype:protein_coding transcript_biotype:protein_coding description:KIP1-like domain containing protein. (Os05t0466200-01)
Sequence

GGCCGCCTCGCCGTCTCGCCACCACCGCAACCCTCGCCTCGTGCCGTACGGGCGCGCCGC
GGGAGCCACCACCCCACGTCCGTCGCGTCGCGTCGCGCGGCACGCCTCGCCGAGAGAGCG
GGTGGTGGTGGTAGTAGTAGTAGCAGTAGAAGGAGGGGGGGTCGGGCGGTCGCGGCGCGG
CGCGGCGTGACCCCGGCCGGCTATGCTTCAGCGCGCGGCGAGCAACGCCTACTCCTGGTG
GTGGGCGTCGCACATCCGCACCACCCAGTCCAAGTGGCTCGACACCACCCTCCACGAGAT
GGAGGACAGGGTGAAGGCCATGCTCAACCTCATCGGAGCGGACGGCGACTCGTTCGGCAA
GAAGGCGGAGCTCTACTTCAAGAGCCGGCCCGAGCTCATCAACCACGTCGAGGAGATGTT
CAGGTCCTACCAGGCGCTGGCTGACCGCTATGACCGGATATCCAGCGAGCTGCACAAGGC
CAACCACACCATTGCCACAGCGTTCCCGGACCAGATCCAATTCTCCATGCAAGATGCCGA
TGGGGAAGGATTCCAGAAGGCGATATCCGGGATCGATCTCAGCAACTTCAAATTTCCTGC
GCTGGAAGGTTTGCCAATGGGGTCACGCGGCGCTAGCCGGGGAACCAGCCCGGTCCCGAA
GAGGACCCAGATGCACCGGAGGATCACCTCCCACATGAACAAGGAAAATGCACAGGAGGA
GATCGACAAGCTGCAAAAGCAAATCCTGGTGCTGCAGACTGAGAAGGAGTTCTTGAAGAC
CTCTTATGACAGCGCGCTGGGCAGGTATCTGGACATTGAGAAGCAGGTGGTGGAGTTGCA
GGATGAAGTTTGCAGCTTGCAGGATGCTTTTAGCACTGGCGCGGCCATTGAAGACAATGA
AGCCCGGGCATTGATGGCTGCACGAGCCATTGTGTCTTGCGAGGATACATTGGTTAATTT
ACAGGACCAGCAACGTAGATCATCTGAAGAGGCAAGAACTGAGTTTAAACGATTCATTGA
AGCAAAGAAGAAGCTTGATACCTTCAAAGCTGAGTGTGGGCAGCCTCATACGCAAAATGA
TGAACCTGATAACAGTGACAAAGAATACATCCATGCAATGCCATCTGGGGATGTTGATGA
TTCTGTTCAGAATGAGATCAGGTTTGACCTGCAGGAAGTATGCCAAAAGGTCAAAGAACT
AATTGAATTGCACCCAGGGGTATCGGTCACTGATTTAGCAGATAAGGTTGACCGACTTGT
GGAGAAGGTAATCGACCTAGAGCTTGCTACCACTTCACAGAATGCTCAGATCAATAGAAT
GAAGACTGAGATAGACGACCTTCACAAGTGCCTGCAAGCCTTGGAGGAAGAGAAGTCGGC
TTTGGTTGCTGATTCCAGTAAGCTGGTAGACAGATTGAAGCAAGTTGAAGAGGTTTTGCA
AGCAGTCCAACATCTTGGAAACTCCATACAAAATGGGACACAGAATATTCATAAAGAAAT
GAATGCAGCCTGCAGTGAACTTGCTGAATTTGTAGAAAAATTACATGAACCTGAGCCCCA
AAACAGTGGTTTCATGAATTCATCCCAAGAGTCAAGTTGTCAAGAAGAAGATTCAGAGGT
AACAAGTCAGTATGCCAAGAAACAAACATCCGACTCAATAGATGGTTCAAAGAATGAAGT
GGAGAAACAAGATAAAGGCTCCGAGGGTCCTTTGGTGCAGCAACATCCTGACACAAATGG
ATCTGATGGTGAGGACAAGATTTTATTAGAGGGGTATGCATCTGTCCTTCAGAGCTACAA
GGGTACAGAGCAAAAGCTGTCAGAAATTGAGAAGACAAATCAAGAGTACCATTCAAGGTC
AATGTCAGAGCTGAAGGATCTGAAGAGTGCCAATGCAATGAAAGATGAGGAGATTCACTC
TCTTCGGCGCATGCTAAGTTCTTTGCAGAGAAAGATGAATGCCCCTGCTCCTGAGAATGT
GGACAAGTCTGAAGAAACTTCCAAAATAAGCACCACTCCTGTCACCGAAGACAAAGAGAT
TGCAGAAATAGAGGAGTACATGAAGCAATGCCAAGTTGAAGAGCAACTTGCTTCGTCAAT
TTCCGAGGAAAAATTTAGAGCAGAGATTGACAGGGTGTTGGAGAATAACTTGGGGTTTTG
GTTGAGGTTTAGCACATCATATCATCAAATACGGAATTTCCAAACATCATTTGACAAGCT
AAAAACTGAGATGGATAAATTGATTGATGCACAGGCACAGTGTGGTGCAGATGGAGTTCC
TATCAGTTATCAGGTAGCAAAGCTGGAGTCAGCTGTTCTAGAAAAAAAATTCCGGGATTT
GAACACAGATCTTCAAGTTTGGATAGAAAAAAATGTGCTATTAAAAGGAGAACTAGAGAA
CAGGTTCTCATCACTCTGTGGCATACAAGAGGAGATATCAAAGATCGCAACTCTGGATAA
AAGCGATGAAGTTCACTTCACCCCTTTCCAAGCTGCAAAACTCCAAGGAGAGGTGCTTAA
TATGAAACAAGAGAATAACAAAGTCGCTAAAGAGCTAGAAGCTGGGCTGGACCATGTAAG
AGGTCTCCAAGTGGAGGTTGGCAGGGTGCTCTTGAAGCTCCGAGAAAATCTTGAATTATC
TATAGCAAGAAGCAACCGAGCTCAGCAAAACTTCCGTAACCTGTCAACGAAAGCTGGAGT
TCCCCTTAGAACTTTCCTGTTCGGCACGAAGCCAAAGAAACCATCACTCTTTTCATGCAT
GGGTCCTGGGGTGCATAAGCATCACAGTGGCTCAAGGGCTGGTCGTAGATGAGAATGGTT
GGATCATCAACTTTCTTTTGTCAATTAATACAGAACAGAGCTCAGTGTACCTGTCAATTG
ATTTGTGGTATATGCAGTTTCTCATAGACCTTAAATGTAAAGAACCCTGCATCTCTTAAT
ATAAATTTGGTTC