Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0462500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:22719262:22721007:1 gene:Os05g0462500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transmembrane receptor, eukaryota domain containing protein. (Os05t0462500-01)
Sequence	ATGGCCGCCGCCGCGCGCCGCCTCCTCCTCCTCGCCATCGCCGTCGCGGCGGTGTCCCTC GCGCCCCGCGCCGCGGCGGAAATCAGGACGGAGGCCTTCCGTGAGGACCCGAGGCCCACC ATCCTGTTCGAGAAGTTCGGGTTCTCCAAGACGGGCGCGGTCAGGATCGTCATCACCGGC GCCGGCATCTCCTCGACGTTCGCCCGCCCGGACCCCAAGCAGCTCGGGTTCTTCCTCCTC TCCGACGAGTCGATGTTCCAGGCCATCTACGAGGCGCAGGCGCGGCGGCCGCCGGAGAGG CGGGAGGAGGTGGCGGGCGGCGGCGCCGACGAGCCCGACGTCTCCCGCTGCATCCTCACG AGCCCCTACGTCAAGACGCTCTTCACCTTCCACGACCTCAAGCGCGGCCACTACAACAAG ACGTTCCCGGTCACCCACCCCGACGAGTACAGCCTCTACTTCGCCAACTGCGCGCCGGAG TCGCTCGTCACCATGAGGGTGCGCACCGAGATGTACAACGGAAACGCCGACGGCTCCGTC GACTACCTCCCCGTCGGCCAGGCGCCCGTGCCGGCGATCTACGGCTTCTTCGCCGCCTGC TACGCCGCGTTCCTCGCCGCCTGGGGGTACCTCACGCTCTCCTCCCGCGACCACCGCGCC GCGGCGCACCAGATCCACCACCTCATGTCGGGCCTCCTCGCCGCGCGCCTGCTCTACTGC CTCTCCGCCGCCGAGGACCAGCACTACATCCGCGTCACGGGGACGCCGCACGGCTGGGAC GTCGCGTTCTACCTCTTCCAGCTCGTCAAGGGCGTCGTCCTGTTCGCGGTGATCGTGCTC GTCGGCACGGGGTGGTCGTTCCTCAGGCCGGTCTTGCAGGACAGGGAGAAGAAGGTGCTC ATGGTGGTGATCCCGCTGCAGGTCATGGCCAACATCGCGTCCGCCGTGATTGGGGAGACC GGCCCGTTCTTGCAAGGGTGGGTGACATGGAACCAGATCTTGCTGTTCGTCGACGTCGCC TGCTGCTGCGCCGTGCTCTTCCCGGTCGTCTGGTCGATGCGATCGCTCCGGGAGACGTCC AAGACTGATGGCAAGGCAGCGCGGACTCTATCGAAGCTCACCCTGTTCCGGCAATTCTAC ATTGTGGTGATCGGTTACCTATACTTCACTAGGATCGTCGTGTATGCGCTCAAGACCATT GCCAGTTACCAGTTCCGGTGGGTGAGCGTCTTGGCCGAGGAGGTGGCCACATTGGCATTC TACCTCTTCATGTTCTACACATTCAGACCGGCCGAGAGGAGCAGATACTTTTCGTTCGAC GAAGATGAGGAGGAGGCTGCTGAGATGGTGCTCCGGGAAGAGGAATTCGAGCTTTGA

Peptide Sequence

PEP ID	Os05t0462500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:22719262:22721007:1 gene:Os05g0462500 transcript:Os05t0462500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transmembrane receptor, eukaryota domain containing protein. (Os05t0462500-01)
Sequence	MAAAARRLLLLAIAVAAVSLAPRAAAEIRTEAFREDPRPTILFEKFGFSKTGAVRIVITG AGISSTFARPDPKQLGFFLLSDESMFQAIYEAQARRPPERREEVAGGGADEPDVSRCILT SPYVKTLFTFHDLKRGHYNKTFPVTHPDEYSLYFANCAPESLVTMRVRTEMYNGNADGSV DYLPVGQAPVPAIYGFFAACYAAFLAAWGYLTLSSRDHRAAAHQIHHLMSGLLAARLLYC LSAAEDQHYIRVTGTPHGWDVAFYLFQLVKGVVLFAVIVLVGTGWSFLRPVLQDREKKVL MVVIPLQVMANIASAVIGETGPFLQGWVTWNQILLFVDVACCCAVLFPVVWSMRSLRETS KTDGKAARTLSKLTLFRQFYIVVIGYLYFTRIVVYALKTIASYQFRWVSVLAEEVATLAF YLFMFYTFRPAERSRYFSFDEDEEEAAEMVLREEEFEL

Transcript Sequence

Transcript ID	Os05t0462500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:22719262:22721007:1 gene:Os05g0462500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transmembrane receptor, eukaryota domain containing protein. (Os05t0462500-01)
Sequence	CACGCGCACACCGACACTTCTCCCCCGCATTCTCTCACCCACCCACACCGCGCGCCACAG ATCTCGCCGCAGCCATGGCCGCCGCCGCGCGCCGCCTCCTCCTCCTCGCCATCGCCGTCG CGGCGGTGTCCCTCGCGCCCCGCGCCGCGGCGGAAATCAGGACGGAGGCCTTCCGTGAGG ACCCGAGGCCCACCATCCTGTTCGAGAAGTTCGGGTTCTCCAAGACGGGCGCGGTCAGGA TCGTCATCACCGGCGCCGGCATCTCCTCGACGTTCGCCCGCCCGGACCCCAAGCAGCTCG GGTTCTTCCTCCTCTCCGACGAGTCGATGTTCCAGGCCATCTACGAGGCGCAGGCGCGGC GGCCGCCGGAGAGGCGGGAGGAGGTGGCGGGCGGCGGCGCCGACGAGCCCGACGTCTCCC GCTGCATCCTCACGAGCCCCTACGTCAAGACGCTCTTCACCTTCCACGACCTCAAGCGCG GCCACTACAACAAGACGTTCCCGGTCACCCACCCCGACGAGTACAGCCTCTACTTCGCCA ACTGCGCGCCGGAGTCGCTCGTCACCATGAGGGTGCGCACCGAGATGTACAACGGAAACG CCGACGGCTCCGTCGACTACCTCCCCGTCGGCCAGGCGCCCGTGCCGGCGATCTACGGCT TCTTCGCCGCCTGCTACGCCGCGTTCCTCGCCGCCTGGGGGTACCTCACGCTCTCCTCCC GCGACCACCGCGCCGCGGCGCACCAGATCCACCACCTCATGTCGGGCCTCCTCGCCGCGC GCCTGCTCTACTGCCTCTCCGCCGCCGAGGACCAGCACTACATCCGCGTCACGGGGACGC CGCACGGCTGGGACGTCGCGTTCTACCTCTTCCAGCTCGTCAAGGGCGTCGTCCTGTTCG CGGTGATCGTGCTCGTCGGCACGGGGTGGTCGTTCCTCAGGCCGGTCTTGCAGGACAGGG AGAAGAAGGTGCTCATGGTGGTGATCCCGCTGCAGGTCATGGCCAACATCGCGTCCGCCG TGATTGGGGAGACCGGCCCGTTCTTGCAAGGGTGGGTGACATGGAACCAGATCTTGCTGT TCGTCGACGTCGCCTGCTGCTGCGCCGTGCTCTTCCCGGTCGTCTGGTCGATGCGATCGC TCCGGGAGACGTCCAAGACTGATGGCAAGGCAGCGCGGACTCTATCGAAGCTCACCCTGT TCCGGCAATTCTACATTGTGGTGATCGGTTACCTATACTTCACTAGGATCGTCGTGTATG CGCTCAAGACCATTGCCAGTTACCAGTTCCGGTGGGTGAGCGTCTTGGCCGAGGAGGTGG CCACATTGGCATTCTACCTCTTCATGTTCTACACATTCAGACCGGCCGAGAGGAGCAGAT ACTTTTCGTTCGACGAAGATGAGGAGGAGGCTGCTGAGATGGTGCTCCGGGAAGAGGAAT TCGAGCTTTGATGAGTTGCGGCGATTCGCAGCAATGGCGGCTGCCTGGCAATTGGAAAAT CTGCTCACCTTGTTCATTTGATCTCTTCTCCCTGTGAGATTTAGCACACCATACAAATTT CAGGAATATAGCTCATTGTCTTGTATTTACTACAGGGATGTAAGATTGTTTTGTTCCTCT CTCCTTGTAGCTTCAAATTTTACTGATGAGACTCAGGATACTAAACTGGACATGTACAAG AAGGTTTCTTGCTTGGAGGGCAATGTGGAAGGAAGGAATTAATTCAGCATGTACTATTGC TTAGGG