Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0462000-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:22678313:22679102:-1 gene:Os05g0462000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to plant-specific domain TIGR01589 family protein. (Os05t0462000-00)
Sequence

ATGGGAGACTCATCATCCTCAGCTTCGTACATCAGAATGGTTCACCACCTGATAGAGAAG
TGCATTTGCTTCAACCTGAACAAGGAGGAGTGCATGGAGGCCCTGGAGAAGCATGCCAAC
ATCAACCCTGTCGTCACTTCCACAGTATGGAAGGAGCTGGAGAAGGAGAACAAGGAGTTC
TTCGAGACCTACAACAAGGACAGGGCGGAGCGCAACATCGAGGCGGAGACGATGCAGCGG
ATCCAGAAGATGCTCTCCGACGCCGCGGCATCCAAGGGCTCCGACGACGACGACGACGAC
GAGAGCTAG

Peptide Sequence

PEP ID

Os05t0462000-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:22678313:22679102:-1 gene:Os05g0462000 transcript:Os05t0462000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to plant-specific domain TIGR01589 family protein. (Os05t0462000-00)
Sequence

MGDSSSSASYIRMVHHLIEKCICFNLNKEECMEALEKHANINPVVTSTVWKELEKENKEF
FETYNKDRAERNIEAETMQRIQKMLSDAAASKGSDDDDDDES

Transcript Sequence

Transcript ID

Os05t0462000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:22678313:22679102:-1 gene:Os05g0462000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to plant-specific domain TIGR01589 family protein. (Os05t0462000-00)
Sequence

CTTAATTAGTGGTGATCTCTGTCTCTCTCAAGCTAGGCGCCATGGGAGACTCATCATCCT
CAGCTTCGTACATCAGAATGGTTCACCACCTGATAGAGAAGTGCATTTGCTTCAACCTGA
ACAAGGAGGAGTGCATGGAGGCCCTGGAGAAGCATGCCAACATCAACCCTGTCGTCACTT
CCACAGTATGGAAGGAGCTGGAGAAGGAGAACAAGGAGTTCTTCGAGACCTACAACAAGG
ACAGGGCGGAGCGCAACATCGAGGCGGAGACGATGCAGCGGATCCAGAAGATGCTCTCCG
ACGCCGCGGCATCCAAGGGCTCCGACGACGACGACGACGACGAGAGCTAGCTCTAGCTAA
GCTATAGCTATAGCTAGAGTTCATGACTAGCTCT