Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0461300-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:22649315:22652432:-1 gene:Os05g0461300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab8A2 description:Similar to RAB8C. (Os05t0461300-01);Similar to RAB8C. (Os05t0461300-02)
Sequence	ATGGCTGCGCCGCCGGCGAGGGCTCGGGCGGACTACGACTACCTCATCAAGCTCCTCCTC ATCGGGGACAGCGGTGTTGGCAAGAGTTGCCTTCTCCTGCGGTTTTCTGATGGTTCCTTC ACTACAAGCTTTATTACCACAATTGGTATTGACTTCAAAATTAGAACAATAGAGCTGGAC GGGAAGCGTATTAAGCTACAAATTTGGGACACAGCTGGCCAAGAACGTTTCCGGACAATT ACCACTGCGTACTACCGTGGAGCCATGGGTATCCTGCTTGTTTATGATGTCACCGACGAG TCATCTTTCAACAACATTCGGAACTGGATTCGGAATATTGAGCAACATGCCTCTGATAAT GTCAACAAAATTTTGGTTGGCAACAAGGCTGATATGGATGAGAGTAAAAGGGCTGTCCCT ACTGCGAAAGGCCAAGCACTGGCTGATGAGTATGGCATCAAATTTTTCGAAACTAGTGCG AAGACAAACCTCAACGTGGAGCAAGTTTTTTTCTCCATTGCACGTGACATTAAGCAGAGG CTTGCTGAGACCGACTCCAAGCCTGAGGACAAGACAATCAAGATTAACAACAAGACGGAT CAGGGTGCCGACAAACCAGCAGCTTCTGGATCTGCATGCTGCGGCTCCTGA

Peptide Sequence

PEP ID	Os05t0461300-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:22649315:22652432:-1 gene:Os05g0461300 transcript:Os05t0461300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab8A2 description:Similar to RAB8C. (Os05t0461300-01);Similar to RAB8C. (Os05t0461300-02)
Sequence	MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQR LAETDSKPEDKTIKINNKTDQGADKPAASGSACCGS

Transcript Sequence

Transcript ID	Os05t0461300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:22649315:22652432:-1 gene:Os05g0461300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab8A2 description:Similar to RAB8C. (Os05t0461300-01);Similar to RAB8C. (Os05t0461300-02)
Sequence	AAAAAAAAAACCAACTCCCTCCTCCCCGTTCTCCAGATCCGCACCGCCACCGCCGCCGCC GCGCGATCCTCCGCCGCGCCTACCGGTCGGGGATTGGTGGAGGAGGCGCGCCGGGTGGGC TGTGGAGTAGGGGGAGGAGGAGGAGGAGGGTGTGAAGCGGAGCGACGAGATGGCTGCGCC GCCGGCGAGGGCTCGGGCGGACTACGACTACCTCATCAAGCTCCTCCTCATCGGGGACAG CGGTGTTGGCAAGAGTTGCCTTCTCCTGCGGTTTTCTGATGGTTCCTTCACTACAAGCTT TATTACCACAATTGGTATTGACTTCAAAATTAGAACAATAGAGCTGGACGGGAAGCGTAT TAAGCTACAAATTTGGGACACAGCTGGCCAAGAACGTTTCCGGACAATTACCACTGCGTA CTACCGTGGAGCCATGGGTATCCTGCTTGTTTATGATGTCACCGACGAGTCATCTTTCAA CAACATTCGGAACTGGATTCGGAATATTGAGCAACATGCCTCTGATAATGTCAACAAAAT TTTGGTTGGCAACAAGGCTGATATGGATGAGAGTAAAAGGGCTGTCCCTACTGCGAAAGG CCAAGCACTGGCTGATGAGTATGGCATCAAATTTTTCGAAACTAGTGCGAAGACAAACCT CAACGTGGAGCAAGTTTTTTTCTCCATTGCACGTGACATTAAGCAGAGGCTTGCTGAGAC CGACTCCAAGCCTGAGGACAAGACAATCAAGATTAACAACAAGACGGATCAGGGTGCCGA CAAACCAGCAGCTTCTGGATCTGCATGCTGCGGCTCCTGAGGAGACGTTCGCCTTCTCGG CCTCCATCGTTTATTATTTGACATTGTTTGTTCCCTGTCTTGCTGTTATAGGAAGAATGT CAAGAAGACACACTATGATACGGATCTGGTTGTACCTATCTTTGCTTCCATTCTTTGAAG CAACTACTCATGCTTTTGACGTAGCTGTTGCAATTGCCTGGGGGGCTACTACTGTACGCT GGATTTCAATCCGTTGAACTGCAAGCTACAGTGTGTAACGTAGTCCATGCTGTATTGCTA TTGGGTTTTCAGTTAATCAATGGATGCATGGAATAGAGTGATGCTGTTCCTGC