Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0460000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:22599462:22602556:-1 gene:Os05g0460000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYTOSOLIC HEAT SHOCK PROTEIN 70-1 description:Similar to 70 kDa heat shock cognate protein 1. (Os05t0460000-01)
Sequence	ATGTCGAAGGGGGAAGGGCCGGCGATCGGGATCGACCTGGGGACGACCTACTCGTGCGTG GGCGTGTGGCAGCACGACCGCGTGGAGATCATCGCCAACGACCAGGGGAACCGGACCACG CCGTCGTACGTCGCCTTCACCGACACCGAGCGGCTCATCGGCGACGCCGCCAAGAACCAG GTCGCCATGAACCCAACCAACACCGTCTTCGATGCGAAGCGGTTGATTGGTAGGAGGTTC TCCGACCCGTCCGTGCAGAGTGACATGAAGCTATGGCCGTTCAAGGTGGTGCCTGGCCCC GGCGACAAGCCGATGATCGTCGTCCAGTACAAGGGCGAGGAGAAGCAGTTCGCCGCGGAG GAGATCTCGTCCATGGTGCTGATCAAGATGAGGGAGATCGCGGAGGCCTACCTCGGCTCG TCCATCAAGAACGCCGTGGTCACCGTCCCGGCCTACTTCAACGACTCGCAGAGGCAGGCC ACCAAGGACGCCGGCGTCATCGCCGGGCTCAACGTGATGCGCATCATCAACGAGCCCACC GCCGCCGCCATCGCGTACGGCCTCGACAAGAAGGCGACGAGCAGCGGCGAGAAGAACGTG CTCATCTTTGACCTCGGCGGCGGCACGTTCGACGTGTCGCTGCTCACCATCGAGGAGGGC ATCTTCGAGGTCAAGGCCACCGCCGGCGACACCCACCTCGGCGGCGAGGACTTCGACAAC CGCATGGTGAACCACTTCGTGCAGGAGTTCAAGCGCAAGAACAAGAAGGACATCAGCGGC AACCCGCGCGCGCTGCGGCGGCTCAGGACGGCGTGCGAGCGCGCCAAGCGCACGCTGTCG TCGACGGCGCAGACCACCATTGAGATCGACTCGCTGTACGAGGGCATCGACTTCTACACG ACGATCACCAGGGCGCGGTTCGAGGAGCTCAACATGGACCTGTTCCGCAAGTGCATGGAG CCCGTGGAGAAGTGCCTCCGCGACGCCAAGATGGACAAGAGCAGCGTGCACGACGTCGTG CTCGTCGGCGGCTCCACCCGCATCCCCAAGGTGCAGCAACTGCTCCAGGACTTCTTCAAC GGCAAGGAGCTCTGCAAGAGCATCAACCCCGACGAGGCCGTGGCGTACGGCGCCGCCGTC CAGGCCGCCATCCTGAGCGGCGAGGGCAACGAGAAGGTGCAGGACCTGCTCCTGCTCGAC GTCACCCCGCTGTCCCTCGGCCTCGAGACCGCCGGCGGCGTCATGACCGTGCTCATCCCG AGGAACACCACCATCCCGACCAAGAAGGAGCAGGTCTTCTCCACCTACTCCGACAACCAG CCCGGCGTCCTGATCCAGGTGTACGAGGGCGAGCGCGCCAGGACCAAGGACAACAACCTC CTCGGCAAGTTCGAGCTCTCCGGCATCCCACCGGCGCCGCGCGGCGTGCCCCAGATCAAC GTCTGCTTCGACATCGACGCCAACGGCATCCTGAACGTGTCCGCGGAGGACAAGACGACG GGGCAGAAGAACAAGATCACCATCACCAACGACAAGGGGCGGCTGAGCAAGGAGGAGATC GAGAAGATGGTGCAGGAGGCGGAGAAGTACAAGGCCGAGGACGAGGAGCACAAGAAGAAG GTGGACGCCAAGAACGCCCTCGAGAACTACGCCTACAACATGCGCAACACCATCAAGGAC GAGAAGATCGCCTCCAAGCTCGCCGCCGACGACAAGAAGAGGATCGAGGACGCCATCGAT GGCGCCATCAGCTGGCTCGACACCAACCAGCTCGCCGAGGCCGACGAGTTCGAGGACAAG ATGAAGGAGCTGGAGGGCATCTGCAACCCGATCATCGCCAAGATGTACCAGGGCCCCGGC GCCGACATGGCCGGAGGCATGGACGAGGACGCGCCGGCGGGCGGCAGCGGCGCAGGCCCC AAGATCGAGGAGGTCGACTAA

Peptide Sequence

PEP ID	Os05t0460000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:22599462:22602556:-1 gene:Os05g0460000 transcript:Os05t0460000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYTOSOLIC HEAT SHOCK PROTEIN 70-1 description:Similar to 70 kDa heat shock cognate protein 1. (Os05t0460000-01)
Sequence	MSKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ VAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVVPGPGDKPMIVVQYKGEEKQFAAE EISSMVLIKMREIAEAYLGSSIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPT AAAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDN RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYT TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFN GKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIP RNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQIN VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKK VDAKNALENYAYNMRNTIKDEKIASKLAADDKKRIEDAIDGAISWLDTNQLAEADEFEDK MKELEGICNPIIAKMYQGPGADMAGGMDEDAPAGGSGAGPKIEEVD

Transcript Sequence

Transcript ID	Os05t0460000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:22599462:22602556:-1 gene:Os05g0460000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYTOSOLIC HEAT SHOCK PROTEIN 70-1 description:Similar to 70 kDa heat shock cognate protein 1. (Os05t0460000-01)
Sequence	GTCTCGTTCGAGAAATCAGAAAGAGAGAGAAATTCCCACGCAGCAGCAAGCAATCCAATC CGAGAGCGCGCGTTTGCGATTATTCGCTTTCGATTCCGCGAGGTTTTTGGAGAGGGAGGA GAAGGAGGAGGAGATGTCGAAGGGGGAAGGGCCGGCGATCGGGATCGACCTGGGGACGAC CTACTCGTGCGTGGGCGTGTGGCAGCACGACCGCGTGGAGATCATCGCCAACGACCAGGG GAACCGGACCACGCCGTCGTACGTCGCCTTCACCGACACCGAGCGGCTCATCGGCGACGC CGCCAAGAACCAGGTCGCCATGAACCCAACCAACACCGTCTTCGATGCGAAGCGGTTGAT TGGTAGGAGGTTCTCCGACCCGTCCGTGCAGAGTGACATGAAGCTATGGCCGTTCAAGGT GGTGCCTGGCCCCGGCGACAAGCCGATGATCGTCGTCCAGTACAAGGGCGAGGAGAAGCA GTTCGCCGCGGAGGAGATCTCGTCCATGGTGCTGATCAAGATGAGGGAGATCGCGGAGGC CTACCTCGGCTCGTCCATCAAGAACGCCGTGGTCACCGTCCCGGCCTACTTCAACGACTC GCAGAGGCAGGCCACCAAGGACGCCGGCGTCATCGCCGGGCTCAACGTGATGCGCATCAT CAACGAGCCCACCGCCGCCGCCATCGCGTACGGCCTCGACAAGAAGGCGACGAGCAGCGG CGAGAAGAACGTGCTCATCTTTGACCTCGGCGGCGGCACGTTCGACGTGTCGCTGCTCAC CATCGAGGAGGGCATCTTCGAGGTCAAGGCCACCGCCGGCGACACCCACCTCGGCGGCGA GGACTTCGACAACCGCATGGTGAACCACTTCGTGCAGGAGTTCAAGCGCAAGAACAAGAA GGACATCAGCGGCAACCCGCGCGCGCTGCGGCGGCTCAGGACGGCGTGCGAGCGCGCCAA GCGCACGCTGTCGTCGACGGCGCAGACCACCATTGAGATCGACTCGCTGTACGAGGGCAT CGACTTCTACACGACGATCACCAGGGCGCGGTTCGAGGAGCTCAACATGGACCTGTTCCG CAAGTGCATGGAGCCCGTGGAGAAGTGCCTCCGCGACGCCAAGATGGACAAGAGCAGCGT GCACGACGTCGTGCTCGTCGGCGGCTCCACCCGCATCCCCAAGGTGCAGCAACTGCTCCA GGACTTCTTCAACGGCAAGGAGCTCTGCAAGAGCATCAACCCCGACGAGGCCGTGGCGTA CGGCGCCGCCGTCCAGGCCGCCATCCTGAGCGGCGAGGGCAACGAGAAGGTGCAGGACCT GCTCCTGCTCGACGTCACCCCGCTGTCCCTCGGCCTCGAGACCGCCGGCGGCGTCATGAC CGTGCTCATCCCGAGGAACACCACCATCCCGACCAAGAAGGAGCAGGTCTTCTCCACCTA CTCCGACAACCAGCCCGGCGTCCTGATCCAGGTGTACGAGGGCGAGCGCGCCAGGACCAA GGACAACAACCTCCTCGGCAAGTTCGAGCTCTCCGGCATCCCACCGGCGCCGCGCGGCGT GCCCCAGATCAACGTCTGCTTCGACATCGACGCCAACGGCATCCTGAACGTGTCCGCGGA GGACAAGACGACGGGGCAGAAGAACAAGATCACCATCACCAACGACAAGGGGCGGCTGAG CAAGGAGGAGATCGAGAAGATGGTGCAGGAGGCGGAGAAGTACAAGGCCGAGGACGAGGA GCACAAGAAGAAGGTGGACGCCAAGAACGCCCTCGAGAACTACGCCTACAACATGCGCAA CACCATCAAGGACGAGAAGATCGCCTCCAAGCTCGCCGCCGACGACAAGAAGAGGATCGA GGACGCCATCGATGGCGCCATCAGCTGGCTCGACACCAACCAGCTCGCCGAGGCCGACGA GTTCGAGGACAAGATGAAGGAGCTGGAGGGCATCTGCAACCCGATCATCGCCAAGATGTA CCAGGGCCCCGGCGCCGACATGGCCGGAGGCATGGACGAGGACGCGCCGGCGGGCGGCAG CGGCGCAGGCCCCAAGATCGAGGAGGTCGACTAAACTGCTCCATGGTTGCCGCTCACGAT GTTCTTTCTGCCATCGTCTCTTTTGGCTGTGGCTTGATCTGTCGTATCGTCGTTGCTTCT GGTAGAAATTAAGTGAGAGTTGTGGGGGAGGAACGCTGTGGTTTACCTGTGGTTTGGAAC TTTCATCTGAACAGCTTTTGGATATGGCGATGCATTCTTAGTTAATTATTGTGAGTAACT CTGTTTTGCTCCGTT