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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0459900-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:22596427:22598350:1 gene:Os05g0459900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L36-1. (Os05t0459900-01);Similar to 60S ribosomal protein L36. (Os05t0459900-02)
Sequence

ATGGCGCCGTCGCAGCCGAAGTCCGGGCTCTTCGTGGGCATCAACAAGGGCCACGTCGTC
ACCAAGCGCGAGCTGCCGCCTCGCCCGTCCGACCGCAAGGGGAAATCCACCAAGAGGGTG
ACCTTTGTCAGGAACTTGATCAGGGAGGTTGCTGGATTTGCTCCCTATGAGAAGCGTATC
ACTGAGCTTCTCAAAGTTGGCAAGGACAAGCGTGCACTGAAGGTGGCAAAGAGAAAGCTT
GGCACCCACAAGAGGGCCAAGAAGAAGAGAGAGGAGATGGCTGGTGTCCTCAGGAAGATG
AGGTCTGGTGGCGGTCACGCTCACACCGAGAAGAAGAAATAG

Peptide Sequence

PEP ID

Os05t0459900-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:22596427:22598350:1 gene:Os05g0459900 transcript:Os05t0459900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L36-1. (Os05t0459900-01);Similar to 60S ribosomal protein L36. (Os05t0459900-02)
Sequence

MAPSQPKSGLFVGINKGHVVTKRELPPRPSDRKGKSTKRVTFVRNLIREVAGFAPYEKRI
TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVLRKMRSGGGHAHTEKKK

Transcript Sequence

Transcript ID

Os05t0459900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:22596427:22598350:1 gene:Os05g0459900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L36-1. (Os05t0459900-01);Similar to 60S ribosomal protein L36. (Os05t0459900-02)
Sequence

CTAGCCGCCGCCGCTTCATTTCTCCCAGGTAAGGAAAAAGGGCTCCCCGATGGCGCCGTC
GCAGCCGAAGTCCGGGCTCTTCGTGGGCATCAACAAGGGCCACGTCGTCACCAAGCGCGA
GCTGCCGCCTCGCCCGTCCGACCGCAAGGGGAAATCCACCAAGAGGGTGACCTTTGTCAG
GAACTTGATCAGGGAGGTTGCTGGATTTGCTCCCTATGAGAAGCGTATCACTGAGCTTCT
CAAAGTTGGCAAGGACAAGCGTGCACTGAAGGTGGCAAAGAGAAAGCTTGGCACCCACAA
GAGGGCCAAGAAGAAGAGAGAGGAGATGGCTGGTGTCCTCAGGAAGATGAGGTCTGGTGG
CGGTCACGCTCACACCGAGAAGAAGAAATAGAGTATCTCCAAGTTCATGAAGTCCATGGC
AATATTGTCTTGTTGAGTTTACTCTTGTAGAACCCTACTACTAGAATTGCACTCTATTAT
CCAGCTAAACATCATGGTGTTAGTTCTGTGTTAAAAACCTCCTGTCTTGTGTTTTTGATC
CTTTCAATGCATGGTTTGCCACCTTAAATTTGCTTGATT