Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0458400-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:22518318:22524115:1 gene:Os05g0458400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FTSH8 description:Similar to AAA-metalloprotease FtsH. (Os05t0458400-01)
Sequence	ATGAGCCTCGCCTCGCTCGCCCGCGCGCTCTCCCGCCGCTCCGCGCCCTCCTCCTCCCGC GCGCGCCAGGGTTTCTCCCTCGGTGGGCTAGGTGGGACCACCAGGTCGCCGCCGCCGCCG TCGTCGCCGCTCCCATCGCTCCATGGCGGGGAGGGCGGTGGGCTGGGATTGGGATTCGTC CGCGGGTACCTGACGGCGGCGCTGGGGAGGCCCGCCGCGGTGAAGGCTGGGACAGACTGG AGGTCCATCCTCGCGAACCCGCAGTTCCGGAGGCTCTTCTCTGACGGGTCCAAGAAGAAT TACGAGAACTACTACCCCAAGGGCAAGAAGGAGGCGCCGAAGGGGGATGGGAGTAACAAG TCTGATTCGAAGCAAGATTCAAGTACAGACGATCAATGGAATTTCCAGGAGACTGCCTCA AAGCAATTGCAAAATTTTCTGGCACCTCTACTGTTTCTTGGACTGATGCTCTCGTCCTTG TCGTCGAGCTCATCAGACCAAAAGGAGATAAGCTTCCAGGAATTCAAGAATAAGCTACTA GAACCTGGTTTAGTTGACCGCATTGTTGTTTCAAATAAATCAGTGGCAAAGGTCTATGTC AGGAGTTCACCACAGTCGAACAGCCAAGGTCAGAACACTGATGCCATCATTACCACCAAT GATGTTCCGAGCAAGCATACTCCCAGCAGATACAAGTATTACTTCAATATTGGAAGTGTT GATTCCTTTGAAGAAAAGTTAGAGGAAGCCCAGGAAGCTTTGGGAGTAGATCCACATGAT TTTGTTCCAGTAACTTATGTTGCTGAAGTGAATTGGTTCCAAGAAGTAATGAGATTTGCC CCAACAGTCTTTCTTGTTGGGCTAATATATTTGATGAGCAAAAGAATGCAGAGTGGTTTT AATATTGGAGGTGGACCTGGCAAGGGTGGCCGTGGTATTTTTAATATTGGAAAAGCTCAG GTGACGAAGATGGACAAAAATTCCAAAAACAAGGTGTTTTTTAAGGATGTAGCTGGTTGT GATGAAGCTAAGCAAGAAATAATGGAGTTTGTGCATTTCCTTAAGAATCCCAAGAAGTAT GAAGAGTTAGGAGCTAAGATACCAAAAGGTGCCTTGCTTGTGGGTCCTCCTGGAACAGGC AAGACTCTGCTTGCCAAAGCTACAGCAGGAGAGTCTGGTGTGCCCTTCCTGTCTATTTCT GGATCAGATTTCATGGAAATGTTTGTTGGGGTTGGACCATCCAGGGTACGGAACTTATTC CAAGAAGCTCGGCAATGTGCTCCCAGTATTATATTTATTGATGAGATCGATGCGATTGGT CGTGCAAGAGGCCGTGGAGGGTTTTCTGGTTCAAATGATGAGCGTGAAAGTACTTTGAAC CAGCTGCTTGTAGAGATGGATGGGTTTGGTACAACTTCTGGTGTTGTTGTTCTTGCTGGT ACAAATAGGCCTGATATTTTAGATAAAGCCTTGCTAAGGCCTGGAAGATTTGATCGCCAA ATAACAATAGACAAGCCAGATATAAAGGGCCGTGATCAAATATTCCGCATATATCTTAAA AAACTTAAACTTGACAATGAGCCATCATTTTATTCGCAAAGGCTAGCGGCTTTGACACCT GGATTTGCAGGAGCTGACATTGCCAATGTTTGTAATGAAGCTGCTTTAATTGCTGCGAGA AGTGAGGAAACTCAGATTACCATGCAACATTTTGAATCTGCAATTGATAGAATTATTGGT GGTTTGGAGAAGAAAAACAAGGTCATCAGCAAACTGGAGCGCCGCACTGTTGCTTACCAT GAATCTGGTCATGCTGTTGCTGGATGGTTTTTAGAGCATGCAGAGCCTCTTCTGAAAGTT ACAATTGTTCCCCGTGGAACAGCTGCTTTAGGATTTGCACAGTATGTTCCAAATGAAAAT CTTTTGATGACAAAAGAACAGCTTTTTGATATGACATGCATGACATTAGGTGGCCGAGCT GCAGAGGAGGTTTTGATTGGAAGGATCTCCACTGGTGCTCAGAATGACCTGGAGAAAGTT ACCAAAATGACCTATGCGCAGGTTGCTGTATACGGTTTCAGCGAAAAGGTTGGGCTTCTG TCCTTCCCTCAGAGGGACGATGGCTTTGAAATGACCAAACCTTACAGCAACCAAACAGCA TCCATCATCGACGATGAGGTGAGGGAATGGGTTGGCAAGGCGTACAAAAAAACAGTGGAA CTGATAACTGAGCACAAGGAGCAAGTCGCCAAAATCGCTGAAATGCTGCTTGAGAAGGAG GTCCTCCACCAGGACGATTTGGTTAGGGTATTAGGAGAACGGCCTTTCAAGGCATCCGAG CCAACTAACTACGACCTCTTCAAGCAAGGGTTCCAGGATGAAGAAGACAGCAAGAACCAA GAGGCGGCCAAAACCCCTCAGCCTGATGATGACGGAACACCCTCGCTTGGCGAGGTTGTA CCCACGTAA

Peptide Sequence

PEP ID	Os05t0458400-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:22518318:22524115:1 gene:Os05g0458400 transcript:Os05t0458400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FTSH8 description:Similar to AAA-metalloprotease FtsH. (Os05t0458400-01)
Sequence	MSLASLARALSRRSAPSSSRARQGFSLGGLGGTTRSPPPPSSPLPSLHGGEGGGLGLGFV RGYLTAALGRPAAVKAGTDWRSILANPQFRRLFSDGSKKNYENYYPKGKKEAPKGDGSNK SDSKQDSSTDDQWNFQETASKQLQNFLAPLLFLGLMLSSLSSSSSDQKEISFQEFKNKLL EPGLVDRIVVSNKSVAKVYVRSSPQSNSQGQNTDAIITTNDVPSKHTPSRYKYYFNIGSV DSFEEKLEEAQEALGVDPHDFVPVTYVAEVNWFQEVMRFAPTVFLVGLIYLMSKRMQSGF NIGGGPGKGGRGIFNIGKAQVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKY EELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLF QEARQCAPSIIFIDEIDAIGRARGRGGFSGSNDERESTLNQLLVEMDGFGTTSGVVVLAG TNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLKKLKLDNEPSFYSQRLAALTP GFAGADIANVCNEAALIAARSEETQITMQHFESAIDRIIGGLEKKNKVISKLERRTVAYH ESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRA AEEVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQRDDGFEMTKPYSNQTA SIIDDEVREWVGKAYKKTVELITEHKEQVAKIAEMLLEKEVLHQDDLVRVLGERPFKASE PTNYDLFKQGFQDEEDSKNQEAAKTPQPDDDGTPSLGEVVPT

Transcript Sequence

Transcript ID	Os05t0458400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:22518318:22524115:1 gene:Os05g0458400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FTSH8 description:Similar to AAA-metalloprotease FtsH. (Os05t0458400-01)
Sequence	GGTAAAACGCCTTCTCCCCCTCCTCTTCCGCCGCCGCGGCGATCCCTCTTTCACCTCCAC CTCCACCTGCTCAGGACGCGGCCACGCAGTAGTCGCGGAGAAAAGAAACCGAAAAGAAAA AAAAAAATCTAGCTACGCATCTCGGCCCGGCCCCCCCGCCGCCGCGCGCTCGGATCCCCC GACGGCTCGCCGCCACGGCGCCGCCGCCGCCATGAGCCTCGCCTCGCTCGCCCGCGCGCT CTCCCGCCGCTCCGCGCCCTCCTCCTCCCGCGCGCGCCAGGGTTTCTCCCTCGGTGGGCT AGGTGGGACCACCAGGTCGCCGCCGCCGCCGTCGTCGCCGCTCCCATCGCTCCATGGCGG GGAGGGCGGTGGGCTGGGATTGGGATTCGTCCGCGGGTACCTGACGGCGGCGCTGGGGAG GCCCGCCGCGGTGAAGGCTGGGACAGACTGGAGGTCCATCCTCGCGAACCCGCAGTTCCG GAGGCTCTTCTCTGACGGGTCCAAGAAGAATTACGAGAACTACTACCCCAAGGGCAAGAA GGAGGCGCCGAAGGGGGATGGGAGTAACAAGTCTGATTCGAAGCAAGATTCAAGTACAGA CGATCAATGGAATTTCCAGGAGACTGCCTCAAAGCAATTGCAAAATTTTCTGGCACCTCT ACTGTTTCTTGGACTGATGCTCTCGTCCTTGTCGTCGAGCTCATCAGACCAAAAGGAGAT AAGCTTCCAGGAATTCAAGAATAAGCTACTAGAACCTGGTTTAGTTGACCGCATTGTTGT TTCAAATAAATCAGTGGCAAAGGTCTATGTCAGGAGTTCACCACAGTCGAACAGCCAAGG TCAGAACACTGATGCCATCATTACCACCAATGATGTTCCGAGCAAGCATACTCCCAGCAG ATACAAGTATTACTTCAATATTGGAAGTGTTGATTCCTTTGAAGAAAAGTTAGAGGAAGC CCAGGAAGCTTTGGGAGTAGATCCACATGATTTTGTTCCAGTAACTTATGTTGCTGAAGT GAATTGGTTCCAAGAAGTAATGAGATTTGCCCCAACAGTCTTTCTTGTTGGGCTAATATA TTTGATGAGCAAAAGAATGCAGAGTGGTTTTAATATTGGAGGTGGACCTGGCAAGGGTGG CCGTGGTATTTTTAATATTGGAAAAGCTCAGGTGACGAAGATGGACAAAAATTCCAAAAA CAAGGTGTTTTTTAAGGATGTAGCTGGTTGTGATGAAGCTAAGCAAGAAATAATGGAGTT TGTGCATTTCCTTAAGAATCCCAAGAAGTATGAAGAGTTAGGAGCTAAGATACCAAAAGG TGCCTTGCTTGTGGGTCCTCCTGGAACAGGCAAGACTCTGCTTGCCAAAGCTACAGCAGG AGAGTCTGGTGTGCCCTTCCTGTCTATTTCTGGATCAGATTTCATGGAAATGTTTGTTGG GGTTGGACCATCCAGGGTACGGAACTTATTCCAAGAAGCTCGGCAATGTGCTCCCAGTAT TATATTTATTGATGAGATCGATGCGATTGGTCGTGCAAGAGGCCGTGGAGGGTTTTCTGG TTCAAATGATGAGCGTGAAAGTACTTTGAACCAGCTGCTTGTAGAGATGGATGGGTTTGG TACAACTTCTGGTGTTGTTGTTCTTGCTGGTACAAATAGGCCTGATATTTTAGATAAAGC CTTGCTAAGGCCTGGAAGATTTGATCGCCAAATAACAATAGACAAGCCAGATATAAAGGG CCGTGATCAAATATTCCGCATATATCTTAAAAAACTTAAACTTGACAATGAGCCATCATT TTATTCGCAAAGGCTAGCGGCTTTGACACCTGGATTTGCAGGAGCTGACATTGCCAATGT TTGTAATGAAGCTGCTTTAATTGCTGCGAGAAGTGAGGAAACTCAGATTACCATGCAACA TTTTGAATCTGCAATTGATAGAATTATTGGTGGTTTGGAGAAGAAAAACAAGGTCATCAG CAAACTGGAGCGCCGCACTGTTGCTTACCATGAATCTGGTCATGCTGTTGCTGGATGGTT TTTAGAGCATGCAGAGCCTCTTCTGAAAGTTACAATTGTTCCCCGTGGAACAGCTGCTTT AGGATTTGCACAGTATGTTCCAAATGAAAATCTTTTGATGACAAAAGAACAGCTTTTTGA TATGACATGCATGACATTAGGTGGCCGAGCTGCAGAGGAGGTTTTGATTGGAAGGATCTC CACTGGTGCTCAGAATGACCTGGAGAAAGTTACCAAAATGACCTATGCGCAGGTTGCTGT ATACGGTTTCAGCGAAAAGGTTGGGCTTCTGTCCTTCCCTCAGAGGGACGATGGCTTTGA AATGACCAAACCTTACAGCAACCAAACAGCATCCATCATCGACGATGAGGTGAGGGAATG GGTTGGCAAGGCGTACAAAAAAACAGTGGAACTGATAACTGAGCACAAGGAGCAAGTCGC CAAAATCGCTGAAATGCTGCTTGAGAAGGAGGTCCTCCACCAGGACGATTTGGTTAGGGT ATTAGGAGAACGGCCTTTCAAGGCATCCGAGCCAACTAACTACGACCTCTTCAAGCAAGG GTTCCAGGATGAAGAAGACAGCAAGAACCAAGAGGCGGCCAAAACCCCTCAGCCTGATGA TGACGGAACACCCTCGCTTGGCGAGGTTGTACCCACGTAATCCTGCAGCAAATTTACAGC TGTAAATTGCACTCCTATTCGATAGATTCTTGTTTGTTGTTGCAGCATAAGAAAATTTGT ATAAATTAACGCCCTCGCCTAATCTCTGATGTGGGAACCCAGTTGGCTTTTCGCCGGCCA TAGTGTTTCCCTGTTTTAAATGAATACGAAGAGCTAGTCGAGGATCATGATTTGAGC