Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0457600-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:22464519:22466117:1 gene:Os05g0457600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Avr9/Cf-9 rapidly elicited protein 137. (Os05t0457600-00)
Sequence

ATGGTGGTTACCAAGATGCGGTGGGCAGACGACGGCGGCGAAGGCGACGACGACGACGAT
CTCCGGCTGCCGGGCGCCGGGAGGCGTTCGCCGTCGCTCGGCATCCTGGCGTTCGAGGCG
GCGTCCACGATGACGAAGCTCCTGTCGCTGCACCGGTCGCTGTCGGAGAAGGAGGTGGCG
AGGCTGCGGTCGAACACCATGCGGGCGGCCGGCGTGGAGTACCTTAGCTCGACCGACCAG
GCGTTCCTGCTCCGGCTGGCCTGCGCCGAGGCGGTGGCGGCGCTGGACGCCGCGGCGGCG
GCGGTCGCGCGGCTCGGCGCGCGGTGCGGGCTCGACTTCGCCGGGCCGTACGCGAGCCTC
AAGGCCGGCGCGCCCGACGCGCGGCTGGACCAGTTCGTGGCGAAGGGGCTCAAGGTGAAG
GCCAAGAGGATGGAGCGGCTCGTCGCCGCCACGGCGAAGCTCTGCGCCGAGATGGAGGCG
CTCGACAAGCTCGAGGCGGCGGAGCAGAAGCTCGCCCGACGTGGGTGGGGCCGCCTCAGC
GTGCCGATCCCCTCGCCGGCCGCCGCCGCCGTCGACGCGGTGGGCTCCGACTCGCTCCGG
CTGGGTATCAGGGCGCAGCGCGCCAGAGTGCGGCGGCTCAAGGAGGAATCGCTCTGGAGC
CAGAGCTACGAGAAGGCCGTCATCCTCATGGCCCGCGCCGCCTGCGCGGTGTTCGTCCGC
GTCTGCGTCGTCTTCGGCGCCCACGTCCCCGGCCTGCCCCCGCCGCTCCCTCCCGCCGAA
GCCGTCCACAGCCGCCTCTCCAAGCTTCTGCTCCACCCAATGTCGGCGGCGGCGCAGCCC
AGGTCGTTGTCAGGGCCCATCCAACGTCGAGACGTGCCGCTGCGCATCGAGATGAGCAGC
AACTCGTGCCCGATCATACGCTCGCATTGCCAGCAGCCATGGCAGACGTCGCCGCCGGGC
GTCGACTGGAGGAAGCTCCTCGAGCCGCCGCCGGGCACGGTGGGCGGCGCGGGGCTGGAC
CTGCAGTACGCGAACGTGATCACCACCGCGGAGCGGCTGCTGCTGGAGACGGACCACGCC
GAGGGGCGGCAGCGCCACGAGGAGGCGCGCGCCGAGCTGTACGCGATGCTGCCGTCGAAG
CTGCGTGCGGCCGTGCGGGCGAAGCTGCGTGGATGGTGGAGGGAGCGCGGCGCCGCGGCG
GCGGTGGCGGTGGAGCTGGACGCGGGGCTCGCGGAGGGGTGGAGGTCGGCGGCGGGGCGC
ATCCTGGCGTGGCTGGCGCCGATGGCGCGGGACACGGCGCGGTGGCACGCGGAGCGGAGC
CTGGACAGGCAGCGGCGGTTCGAGGTGGGCGGCGGCGGCGGCGGCAGCGCGCGGGCGTGG
GCGCTGCAGACGCTGCGGTGGGCCGACGCGGAGAAGGCGGAGGCGGCGGTGGTGGAGGTG
CTCGTCGCGCTCAGCTGCGTCGGCTGGTACGACGAGCGGCGGCGGGTCGCGTCGCTCCGT
TTCTGA

Peptide Sequence

PEP ID

Os05t0457600-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:22464519:22466117:1 gene:Os05g0457600 transcript:Os05t0457600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Avr9/Cf-9 rapidly elicited protein 137. (Os05t0457600-00)
Sequence

MVVTKMRWADDGGEGDDDDDLRLPGAGRRSPSLGILAFEAASTMTKLLSLHRSLSEKEVA
RLRSNTMRAAGVEYLSSTDQAFLLRLACAEAVAALDAAAAAVARLGARCGLDFAGPYASL
KAGAPDARLDQFVAKGLKVKAKRMERLVAATAKLCAEMEALDKLEAAEQKLARRGWGRLS
VPIPSPAAAAVDAVGSDSLRLGIRAQRARVRRLKEESLWSQSYEKAVILMARAACAVFVR
VCVVFGAHVPGLPPPLPPAEAVHSRLSKLLLHPMSAAAQPRSLSGPIQRRDVPLRIEMSS
NSCPIIRSHCQQPWQTSPPGVDWRKLLEPPPGTVGGAGLDLQYANVITTAERLLLETDHA
EGRQRHEEARAELYAMLPSKLRAAVRAKLRGWWRERGAAAAVAVELDAGLAEGWRSAAGR
ILAWLAPMARDTARWHAERSLDRQRRFEVGGGGGGSARAWALQTLRWADAEKAEAAVVEV
LVALSCVGWYDERRRVASLRF

Transcript Sequence

Transcript ID

Os05t0457600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:22464519:22466117:1 gene:Os05g0457600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Avr9/Cf-9 rapidly elicited protein 137. (Os05t0457600-00)
Sequence

CGAGCCGAGGTGAGGTGTGTCCATGGTGGTTACCAAGATGCGGTGGGCAGACGACGGCGG
CGAAGGCGACGACGACGACGATCTCCGGCTGCCGGGCGCCGGGAGGCGTTCGCCGTCGCT
CGGCATCCTGGCGTTCGAGGCGGCGTCCACGATGACGAAGCTCCTGTCGCTGCACCGGTC
GCTGTCGGAGAAGGAGGTGGCGAGGCTGCGGTCGAACACCATGCGGGCGGCCGGCGTGGA
GTACCTTAGCTCGACCGACCAGGCGTTCCTGCTCCGGCTGGCCTGCGCCGAGGCGGTGGC
GGCGCTGGACGCCGCGGCGGCGGCGGTCGCGCGGCTCGGCGCGCGGTGCGGGCTCGACTT
CGCCGGGCCGTACGCGAGCCTCAAGGCCGGCGCGCCCGACGCGCGGCTGGACCAGTTCGT
GGCGAAGGGGCTCAAGGTGAAGGCCAAGAGGATGGAGCGGCTCGTCGCCGCCACGGCGAA
GCTCTGCGCCGAGATGGAGGCGCTCGACAAGCTCGAGGCGGCGGAGCAGAAGCTCGCCCG
ACGTGGGTGGGGCCGCCTCAGCGTGCCGATCCCCTCGCCGGCCGCCGCCGCCGTCGACGC
GGTGGGCTCCGACTCGCTCCGGCTGGGTATCAGGGCGCAGCGCGCCAGAGTGCGGCGGCT
CAAGGAGGAATCGCTCTGGAGCCAGAGCTACGAGAAGGCCGTCATCCTCATGGCCCGCGC
CGCCTGCGCGGTGTTCGTCCGCGTCTGCGTCGTCTTCGGCGCCCACGTCCCCGGCCTGCC
CCCGCCGCTCCCTCCCGCCGAAGCCGTCCACAGCCGCCTCTCCAAGCTTCTGCTCCACCC
AATGTCGGCGGCGGCGCAGCCCAGGTCGTTGTCAGGGCCCATCCAACGTCGAGACGTGCC
GCTGCGCATCGAGATGAGCAGCAACTCGTGCCCGATCATACGCTCGCATTGCCAGCAGCC
ATGGCAGACGTCGCCGCCGGGCGTCGACTGGAGGAAGCTCCTCGAGCCGCCGCCGGGCAC
GGTGGGCGGCGCGGGGCTGGACCTGCAGTACGCGAACGTGATCACCACCGCGGAGCGGCT
GCTGCTGGAGACGGACCACGCCGAGGGGCGGCAGCGCCACGAGGAGGCGCGCGCCGAGCT
GTACGCGATGCTGCCGTCGAAGCTGCGTGCGGCCGTGCGGGCGAAGCTGCGTGGATGGTG
GAGGGAGCGCGGCGCCGCGGCGGCGGTGGCGGTGGAGCTGGACGCGGGGCTCGCGGAGGG
GTGGAGGTCGGCGGCGGGGCGCATCCTGGCGTGGCTGGCGCCGATGGCGCGGGACACGGC
GCGGTGGCACGCGGAGCGGAGCCTGGACAGGCAGCGGCGGTTCGAGGTGGGCGGCGGCGG
CGGCGGCAGCGCGCGGGCGTGGGCGCTGCAGACGCTGCGGTGGGCCGACGCGGAGAAGGC
GGAGGCGGCGGTGGTGGAGGTGCTCGTCGCGCTCAGCTGCGTCGGCTGGTACGACGAGCG
GCGGCGGGTCGCGTCGCTCCGTTTCTGAGCTAGCCGCCTCTTTGGCTTCCACGCCGGTGG
CCTCGCCGCAACGGCGCAGCACCGGCAACGGCACGTAGG