Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0456925-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:22440910:22445473:-1 gene:Os05g0456925 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to regulator of chromosome condensation (RCC1) family protein. (Os05t0456925-00)
Sequence

ATGAATGGAGGAGGAGGAGGGGGAGGGGAGGGGGAGGAGATGGAGGAGGATGGGGGAGGC
GCGGGGAGGAGGAAGGAGCGGGTGGTGCTGATGTGGGGGTACCTGCCCGGGGTGTCGCAG
CAGCGGTCGCCGCTGCTGGGGCCGGTGCCCGTGAGGATGCCGGACGCGGCCGCGGCGGCC
GGTGATGCGTGGAGGGATGTGGCCGGCGGCGGGTGCGGCTTCGCGATGGCCGTCTCCGAG
CAAGGAAAACTCTTCACTTGGGGCTCTACCGATGATATGGGACAAAGTTACGTGACTGCT
GGGAAGCATGAGGAAACTCCGGAGGCATTTCCTCTTCCTAGTGATATTGCAATTGTAAGG
GCTGACGCTGGATGGGCACATTGTGTTGCAATAACAGGTAAAGGTGATGTCTACACATGG
GGTTGGAAAGAATGCGTTCCAACTGGAAGGGTCATTGCAGACCATTCTGCAACTGGGGCT
ATGGATTGTGATAAAAGGCAAAGTGGGGTTGCCACTGACCAAGTGAGCCCCAGGTCAAAG
GTGTCTAGGACAAGCACCAAGGCAGCATCTGGTCCTGCTGAAAGCCGAAGTTCTGAGGAT
AGCACAAAGCGACGGAGGTTATCTTCATCGAAACACGGGGCTGAAAGTGAATCATCTAGT
GATGAAAATCTTTCAGCACCACCTTGTGTTGTGACATTTAATACAGGAGTGAAGATAGTG
GAAGTAGCTGCAGGTGGCCGTCATACATTAGTGCTGTCAGATTTTGGTCAGGTCTGGGGT
TGGGGCTATGGTGGGGAAGGACAACTAGGTTTAGGCTCTAGGATCCGGACAGTTTCCTCC
CCACATCCCATACCTTGTGTTCAATCGGCGTTCTACAGCAAGGACCGTACAGGAATTGTG
ATGGGTAGCAGAACTTTGGAAGGAACAAATGATAGAGCAGCAACTTGCGTGAAAGCAATT
GCCTGTGGAGGCCGTCATAGTGCTGTGGTGACAGATTCAGGAACACTTCTTACATTTGGA
TGGGGATTATATGGACAGTGTGGACAAGGGAACACGGATGATATTTTAAGCCCAACGTGT
GTTTCGGCTATTATGGGAGTGAAGATACAACGTGTAGCAGCTGGGCTATGGCATACTGTA
TGTACATCTGCTGATGGTGATGTATATTCCTTTGGAGGTAACCAGTTTGGGCAGCTGGGA
ACTGGATCAGATCAAGCTGAGATTGTTCCAAAGTTGGTAGAAGCCTCGAAATTGGAAAAT
AATCATGCAAGAGGTGTTTCGTGTGGAGCCCGACACAGTGCAGTCATAACAGATAAAGGA
GATGTCTTCTGCTGGGGTTGGAACAAGTACGGTCAGCTTGGTTTGGGCGACTCAACAGAC
AGAAACGTACCATGCCAAGTGCCCGTGGAAGCGTACAACCCGCTAAACGTTTCATGCGGT
TGGTGGCACACGTTGGTTCTCGCGGAATATCCTACCTGA

Peptide Sequence

PEP ID

Os05t0456925-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:22440910:22445473:-1 gene:Os05g0456925 transcript:Os05t0456925-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to regulator of chromosome condensation (RCC1) family protein. (Os05t0456925-00)
Sequence

MNGGGGGGGEGEEMEEDGGGAGRRKERVVLMWGYLPGVSQQRSPLLGPVPVRMPDAAAAA
GDAWRDVAGGGCGFAMAVSEQGKLFTWGSTDDMGQSYVTAGKHEETPEAFPLPSDIAIVR
ADAGWAHCVAITGKGDVYTWGWKECVPTGRVIADHSATGAMDCDKRQSGVATDQVSPRSK
VSRTSTKAASGPAESRSSEDSTKRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIV
EVAAGGRHTLVLSDFGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCVQSAFYSKDRTGIV
MGSRTLEGTNDRAATCVKAIACGGRHSAVVTDSGTLLTFGWGLYGQCGQGNTDDILSPTC
VSAIMGVKIQRVAAGLWHTVCTSADGDVYSFGGNQFGQLGTGSDQAEIVPKLVEASKLEN
NHARGVSCGARHSAVITDKGDVFCWGWNKYGQLGLGDSTDRNVPCQVPVEAYNPLNVSCG
WWHTLVLAEYPT

Transcript Sequence

Transcript ID

Os05t0456925-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:22440910:22445473:-1 gene:Os05g0456925 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to regulator of chromosome condensation (RCC1) family protein. (Os05t0456925-00)
Sequence

GTGCTCGCGCGAGCGAGCGAGCGAGCGAGAGAGATCGAGAGGAGAATCGAGAGCGAGAGT
GAGATCGAGGGAGAGAGGGGGGGTTTGGGTTGGGAGGAGGAGATGAATGGAGGAGGAGGA
GGGGGAGGGGAGGGGGAGGAGATGGAGGAGGATGGGGGAGGCGCGGGGAGGAGGAAGGAG
CGGGTGGTGCTGATGTGGGGGTACCTGCCCGGGGTGTCGCAGCAGCGGTCGCCGCTGCTG
GGGCCGGTGCCCGTGAGGATGCCGGACGCGGCCGCGGCGGCCGGTGATGCGTGGAGGGAT
GTGGCCGGCGGCGGGTGCGGCTTCGCGATGGCCGTCTCCGAGCAAGGAAAACTCTTCACT
TGGGGCTCTACCGATGATATGGGACAAAGTTACGTGACTGCTGGGAAGCATGAGGAAACT
CCGGAGGCATTTCCTCTTCCTAGTGATATTGCAATTGTAAGGGCTGACGCTGGATGGGCA
CATTGTGTTGCAATAACAGGTAAAGGTGATGTCTACACATGGGGTTGGAAAGAATGCGTT
CCAACTGGAAGGGTCATTGCAGACCATTCTGCAACTGGGGCTATGGATTGTGATAAAAGG
CAAAGTGGGGTTGCCACTGACCAAGTGAGCCCCAGGTCAAAGGTGTCTAGGACAAGCACC
AAGGCAGCATCTGGTCCTGCTGAAAGCCGAAGTTCTGAGGATAGCACAAAGCGACGGAGG
TTATCTTCATCGAAACACGGGGCTGAAAGTGAATCATCTAGTGATGAAAATCTTTCAGCA
CCACCTTGTGTTGTGACATTTAATACAGGAGTGAAGATAGTGGAAGTAGCTGCAGGTGGC
CGTCATACATTAGTGCTGTCAGATTTTGGTCAGGTCTGGGGTTGGGGCTATGGTGGGGAA
GGACAACTAGGTTTAGGCTCTAGGATCCGGACAGTTTCCTCCCCACATCCCATACCTTGT
GTTCAATCGGCGTTCTACAGCAAGGACCGTACAGGAATTGTGATGGGTAGCAGAACTTTG
GAAGGAACAAATGATAGAGCAGCAACTTGCGTGAAAGCAATTGCCTGTGGAGGCCGTCAT
AGTGCTGTGGTGACAGATTCAGGAACACTTCTTACATTTGGATGGGGATTATATGGACAG
TGTGGACAAGGGAACACGGATGATATTTTAAGCCCAACGTGTGTTTCGGCTATTATGGGA
GTGAAGATACAACGTGTAGCAGCTGGGCTATGGCATACTGTATGTACATCTGCTGATGGT
GATGTATATTCCTTTGGAGGTAACCAGTTTGGGCAGCTGGGAACTGGATCAGATCAAGCT
GAGATTGTTCCAAAGTTGGTAGAAGCCTCGAAATTGGAAAATAATCATGCAAGAGGTGTT
TCGTGTGGAGCCCGACACAGTGCAGTCATAACAGATAAAGGAGATGTCTTCTGCTGGGGT
TGGAACAAGTACGGTCAGCTTGGTTTGGGCGACTCAACAGACAGAAACGTACCATGCCAA
GTGCCCGTGGAAGCGTACAACCCGCTAAACGTTTCATGCGGTTGGTGGCACACGTTGGTT
CTCGCGGAATATCCTACCTGATG