Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0456500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:22425364:22427412:1 gene:Os05g0456500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os05t0456500-01);Similar to predicted protein. (Os05t0456500-02)
Sequence	ATGTGGGAGGTGGCGTGGTGGAGGCCCGGGACGTGGGGCGGGCTGGCGATGCGGGTGGGG CAGGTCGCCTTCGCCGGAGCCTCCATCGGCGTCATGGCGTCCGGGGCCGGCTTCGCCAAC TACACGGCCTTCTGCTACTTGATTGCATCAATGGGATTACAATCATTGTGGAGCTTGGGA CTTGCATGCCTTGACGTGTATGCCTTGACAGTCAAAAGGGATCTCAACAATGCTCTTCTC GTGAGTTTGTTTGTCATTGGAGACTGGGTAACTGCACTTCTGTCCTTTGCTGCATCTTGC TCAGCTGGAGGTGTTATGGTTCTGTTTAAAAGGGACGTGCTTTTCTGCAGAAGGTATCCA CAACTGCCTTGTGGGAGATTCGAACTTGCTGTAGCGCTTGCATTTTTGTCTTGGGCACTT AGTGCTACATCAGCCATTATCATGTTCTGTCTCCTTGCTGCATTCTAG

Peptide Sequence

PEP ID	Os05t0456500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:22425364:22427412:1 gene:Os05g0456500 transcript:Os05t0456500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os05t0456500-01);Similar to predicted protein. (Os05t0456500-02)
Sequence	MWEVAWWRPGTWGGLAMRVGQVAFAGASIGVMASGAGFANYTAFCYLIASMGLQSLWSLG LACLDVYALTVKRDLNNALLVSLFVIGDWVTALLSFAASCSAGGVMVLFKRDVLFCRRYP QLPCGRFELAVALAFLSWALSATSAIIMFCLLAAF

Transcript Sequence

Transcript ID	Os05t0456500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:22425364:22427412:1 gene:Os05g0456500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os05t0456500-01);Similar to predicted protein. (Os05t0456500-02)
Sequence	ATTCCTCCCCCTTTTTCTCCTCCTCCTCCTCCGCGAGTGTGAGCCTAGAAACTGCGGCGG TTTTGGGCGCGATTTGGTTTCCAACCACCTCGATTGGAGTGCGCCGGCGGTGATCCGGTT GGTCCATGGCCGGTGGTGGAGGTAGGTGAGGGGGAGGGCGGCGGCGGCGGAGGAGGAGGG GTTTGGGGGGTCGTGGGATGTGGGAGGTGGCGTGGTGGAGGCCCGGGACGTGGGGCGGGC TGGCGATGCGGGTGGGGCAGGTCGCCTTCGCCGGAGCCTCCATCGGCGTCATGGCGTCCG GGGCCGGCTTCGCCAACTACACGGCCTTCTGCTACTTGATTGCATCAATGGGATTACAAT CATTGTGGAGCTTGGGACTTGCATGCCTTGACGTGTATGCCTTGACAGTCAAAAGGGATC TCAACAATGCTCTTCTCGTGAGTTTGTTTGTCATTGGAGACTGGGTAACTGCACTTCTGT CCTTTGCTGCATCTTGCTCAGCTGGAGGTGTTATGGTTCTGTTTAAAAGGGACGTGCTTT TCTGCAGAAGGTATCCACAACTGCCTTGTGGGAGATTCGAACTTGCTGTAGCGCTTGCAT TTTTGTCTTGGGCACTTAGTGCTACATCAGCCATTATCATGTTCTGTCTCCTTGCTGCAT TCTAGTCTTGCATATAATCCTGTGTAAGTTCTGTTTATAGTGCTGCCTTTTTTCTGTTTT ATCTTGTTAGCTTTGATTTTGTATAGGATCATTTTCAAGAATATGTAGTGAACCACACGA CCGAAAAGTGGAAATGCTGGGGAAGTTC