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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0453900-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:22281707:22283290:1 gene:Os05g0453900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PARTNER OF SLD FIVE 1 description:Similar to DNA replication complex GINS protein PSF1. (Os05t0453900-00)
Sequence

ATGTACGGGCGGCGCGCGTCGCAGCTGCTGAAGGAGGTCGACTCCTGCGAGGCCGGACAG
CTCGTGCCGTTCAACAGCGATGTGTTTGATCAGGTTATTAGAGAGTGCAATGAACACAAT
ACACAGTTTCAGTCATTGATAAGGAAAATGGTGGAGCAGAACTTAGACATTGAAACAACC
AGAAATGACGACCACTATGGGGCAGCCGTCCATCATCTTTCGCTGCTTCGTAACAAAAGA
TGTCTCATGGCTTACATGTATAACCGAGCAGAGGTTATTCAGAGCTTTAGATGGAAAATC
GGCCCAGTGCTTCCTCATGAAATACAAGAAAAGCTCCATTTTTCTGAGAAAGAGTACTTC
AAGAACCACTCAGCAGCCATTAAATCATATATGTCAGAGATGGATATAGATTTAACAGTG
GACATGGTGCCTCCCAAGGATCCCTACATCCAGGTTCGGGTGCTTGAGGACATTGGTGAA
GTATCTCTTGGTGACCATTCCATATCATTGACAAAGAACTCACTTCATTTCCTAAGGCGC
ACTGATACTGAACAATTTATATCACAGGGTCTTATGGAAGAGTTTCTGGAGTAG

Peptide Sequence

PEP ID

Os05t0453900-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:22281707:22283290:1 gene:Os05g0453900 transcript:Os05t0453900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PARTNER OF SLD FIVE 1 description:Similar to DNA replication complex GINS protein PSF1. (Os05t0453900-00)
Sequence

MYGRRASQLLKEVDSCEAGQLVPFNSDVFDQVIRECNEHNTQFQSLIRKMVEQNLDIETT
RNDDHYGAAVHHLSLLRNKRCLMAYMYNRAEVIQSFRWKIGPVLPHEIQEKLHFSEKEYF
KNHSAAIKSYMSEMDIDLTVDMVPPKDPYIQVRVLEDIGEVSLGDHSISLTKNSLHFLRR
TDTEQFISQGLMEEFLE

Transcript Sequence

Transcript ID

Os05t0453900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:22281707:22283290:1 gene:Os05g0453900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PARTNER OF SLD FIVE 1 description:Similar to DNA replication complex GINS protein PSF1. (Os05t0453900-00)
Sequence

GAGGAGGATGTACGGGCGGCGCGCGTCGCAGCTGCTGAAGGAGGTCGACTCCTGCGAGGC
CGGACAGCTCGTGCCGTTCAACAGCGATGTGTTTGATCAGGTTATTAGAGAGTGCAATGA
ACACAATACACAGTTTCAGTCATTGATAAGGAAAATGGTGGAGCAGAACTTAGACATTGA
AACAACCAGAAATGACGACCACTATGGGGCAGCCGTCCATCATCTTTCGCTGCTTCGTAA
CAAAAGATGTCTCATGGCTTACATGTATAACCGAGCAGAGGTTATTCAGAGCTTTAGATG
GAAAATCGGCCCAGTGCTTCCTCATGAAATACAAGAAAAGCTCCATTTTTCTGAGAAAGA
GTACTTCAAGAACCACTCAGCAGCCATTAAATCATATATGTCAGAGATGGATATAGATTT
AACAGTGGACATGGTGCCTCCCAAGGATCCCTACATCCAGGTTCGGGTGCTTGAGGACAT
TGGTGAAGTATCTCTTGGTGACCATTCCATATCATTGACAAAGAACTCACTTCATTTCCT
AAGGCGCACTGATACTGAACAATTTATATCACAGGGTCTTATGGAAGAGTTTCTGGAGTA
GAGATCACATATGGTGTACAATAGGTA