Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0453700-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:22276282:22278726:1 gene:Os05g0453700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to USP family protein. (Os05t0453700-01);Similar to ENOD18 protein (Fragment). (Os05t0453700-02)
Sequence	ATGGCCGGTGGCGGCAGGGCCGATGACGAGCGAAGGATCGGGGTGGCGATGGACTACTCG GCGAGCAGCAAGAGGGCGCTGGACTGGGCCATCGCCAACCTGCTCCGCCGGGGCGACCAC CTCGTCGTCCTCCACGTCCTGCATCACGGCGGGGAGGAGGCCAAGCACGCCCTGTGGGGC AAGTCCGGATCCCCGCTGATCCCTCTCTCCGAGTTCCGGGATCCGACGGCGATGCAGCAG TACGGCGTGCACTGCGACGCCGAGGTGCTCGACATGCTCGACACGGCGGCGCGCCAGTTG GAGCTTACCGTAGTGGCGAAGCTGTACTGGGGCGACGCCAGGGAGAAGCTCTGCGACGCC GTCGAGGAGCAGAAGATCGACACGCTCGTCATGGGCAGCCGCGGCCTCGGCTCGATCCAG AGGTATAACTCCTACTTCTGTTTGCAATGTTGTTGCCTCATCAATCAAGAATCAAAATTG CAGGCATTGACCATAGAACTTGCCTTTGGGCCAGTTGCTAATATTCCTGTTCAGATAGAC AAGCTCTGTCGAGAACGATGCACTGCTTAA

Peptide Sequence

PEP ID	Os05t0453700-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:22276282:22278726:1 gene:Os05g0453700 transcript:Os05t0453700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to USP family protein. (Os05t0453700-01);Similar to ENOD18 protein (Fragment). (Os05t0453700-02)
Sequence	MAGGGRADDERRIGVAMDYSASSKRALDWAIANLLRRGDHLVVLHVLHHGGEEAKHALWG KSGSPLIPLSEFRDPTAMQQYGVHCDAEVLDMLDTAARQLELTVVAKLYWGDAREKLCDA VEEQKIDTLVMGSRGLGSIQRYNSYFCLQCCCLINQESKLQALTIELAFGPVANIPVQID KLCRERCTA

Transcript Sequence

Transcript ID	Os05t0453700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:22276282:22278726:1 gene:Os05g0453700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to USP family protein. (Os05t0453700-01);Similar to ENOD18 protein (Fragment). (Os05t0453700-02)
Sequence	GTCTCCATCTCGCCACATTCGCCGCGCGCGTCACACGAGCAAGGGAGCAAGCGAGGAGAG AGGAGAGGCTTAGCGAGAGAGGTGAGGAGAGGAGAGGATTTGGAACTTTTGATCTTTGGG ATCGCGAGACGACGGAGATGGCCGGTGGCGGCAGGGCCGATGACGAGCGAAGGATCGGGG TGGCGATGGACTACTCGGCGAGCAGCAAGAGGGCGCTGGACTGGGCCATCGCCAACCTGC TCCGCCGGGGCGACCACCTCGTCGTCCTCCACGTCCTGCATCACGGCGGGGAGGAGGCCA AGCACGCCCTGTGGGGCAAGTCCGGATCCCCGCTGATCCCTCTCTCCGAGTTCCGGGATC CGACGGCGATGCAGCAGTACGGCGTGCACTGCGACGCCGAGGTGCTCGACATGCTCGACA CGGCGGCGCGCCAGTTGGAGCTTACCGTAGTGGCGAAGCTGTACTGGGGCGACGCCAGGG AGAAGCTCTGCGACGCCGTCGAGGAGCAGAAGATCGACACGCTCGTCATGGGCAGCCGCG GCCTCGGCTCGATCCAGAGGTATAACTCCTACTTCTGTTTGCAATGTTGTTGCCTCATCA ATCAAGAATCAAAATTGCAGGCATTGACCATAGAACTTGCCTTTGGGCCAGTTGCTAATA TTCCTGTTCAGATAGACAAGCTCTGTCGAGAACGATGCACTGCTTAAATCGATAATTAAA CTACATACTGTGTCCAGTTCCGTGGTACGGTAGTTTTTAATCTCAACACATAATTGCATT GCACTGGAAATTTGGGGGCCAAATGCGTATCTGACTTGGCCTTGCAACTTGAATCATTAC AGCCAATGAGATTGGATTATCGAGCATTTCAGTTGCACTTGTTTTTTCTGTGGGACCGCC AAGGCATCAACTTGTTGCCTTCACGATTAATAAATTGTAAGAGCAAGTACAATAGCTGGC TATAAACCAGCTGTAAATATATTTTAAGAAGATAAATGAGGAGAGAGAAGGGTAGTGGGC TACAGATTTGTAGCCAACTATAGCACGAACTCCAAGACGCAGTGTGTGTATGACAGGCGG GACCAAATATTAATAGTGTAGTATGTAATTATTGTATAAATGAGCTATTAGATTGGCTAT AGATGAATTGGAGCTAGTAGTTGGCTATACTATTAAACTTGCTCTAAAGTCGCATGTTCA TCCTTGAGACATGTATATCCTGATTCTTGGTCGGCGCGTTGTTTTATGTTCTCATGTGAA ACTCCTTTTCATATTCAAATGTTTCCCATGTACAGTTTGAGCATAAGAATGATGTATATA TATAGAGTTAGTTCAACAACTAGAATGCTTGTGCTATTTCAATATCCAAATACAGAAGTT TATATACAGGAACGTGATTATCTTGGTTTTAGCCTCTTAGGTTAGTGTCCACGTCCAAAG ACTATAACTATTTAGTCTATAACATATTGAGTGGATGATATGCATTGTTAGCTTGAAACT TACTATTGTCATCTTGATTCAGAACAGAAAATTGTGAAGTTTGAAGATGCGATGTCTAAT GAACGTTTGGGAGTATACGCTTTGCGCATATGGCAGTATTTGTTTAGGGCTGGTTTGGTT CGATGCCTAAATTAGTCTTACCAATATTTGGCAATTTCAATAGTGTTTAGTGTCTATTTG GTTTGAAGCCAAATTTTGTTATGCCTAAGAAAATAGGTCATTTCAATAATGAACTTATTA GACTATTTTGGCTTCAATCTAAACACAACTTTGTCTTACCAAAATTAGTCATACCAAAAA TTACCAAATTTTGGTACTGATAGAATTTGGTAAGGCCTATTTAGACCACAAACCAAACCA ACTCTTTAGTGATTCTCTAGCTTCTGAATTGAATCCAGCACACCATATAATAGTCTCATC GACTTTTTAGCTCGTTATGATTTCATCTGCAACTTTCCTGTCTGCCAACATTTTACAGGA TTCTTCTGGGGAGTGTGACAAACTACGTGCTGTCAAACGCATCATGCCCTGTAACAGTCG TCAAGGGGAAGTGATCGATGATTCGACTTGAGTGGATATACTGTTACTGTTGCTACTGTA TCTGAATAAAGCGTGTATGGAACTTCTTTTGTGTTTGTAATGTTGCAGCCTTCCCAGGTT CTTCTAGACAGTTCACTTTGCAAACAGTCCATGCTTGTGTGCTCAACCATGTGAATCACT TTATATATATAGACCGAATTTGAGGTTTTACTTTC