Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0449900-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:22081376:22083466:-1 gene:Os05g0449900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os05t0449900-01)
Sequence	ATGATGAAGGAGTCGTACATGGAGGTGCTCCCGCCGGCGCCGGCGCACTACTTCGTCGGC CAGGCTGCGGCGGCGGGCGGGTGGTTCTTGCCGGACCGGCGCGGCGGCGGCGGAGCGTGG TCGCAGGAGGAGAACAAGGTGTTCGAGCAGGCGCTGGCGGCGCTCGACCGGAACGACCCG GAGAGGTGGGAGCGGGTGGCGCTGCTGCTGCCCGGCAAGACGGTGGCCGACGTCATGACG CACTACGACGACCTCGAGAACGACGTCTGCTTCATCGAGGCCGGCCTCGTCCCCTTCCCC CACTACGGCGCCGCCGGCGGCGGCGGCGGCTCCGGGTTCACTCTTGACTGGGACGGCGGC GATGACCCCGCCGGCCTTGGGTTCAAGCGCTCCTGCTACATGGTCGGCGGCAAGCGCGCG CGCGGCCCTGACCAGGAGCGCAAGAAGGGCGTGCCGTGGACAGAGGAGGAGCACAAGTTG TTCTTGATGGGGCTGAAGAAGTACGGCAGAGGTGACTGGAGGAACATCTCCCGCAACTTC GTGACGAGCCGGACGCCGACGCAGGTGGCCAGCCACGCGCAGAAGTACTTCATCCGGCTC AACTCCGGCGGCAAGGACAAGCGCCGCTCCAGCATCCACGACATCACCACCGTCAACCTC CCCGACGACGACCACGGCAACCCCTCGCCGTCGCCGCCGCCGTCCGTGCTCACCGCGCAC TCCTCCTCCTCCGCCGCCGCCGTCTCGGAGCAGTTCGGCGTGCTCGTCGACGGCAAGCCT CCGCCGCCGCCGCTCGGCCGTGGCGCCGGGCACCACCACTTCATGCCCCATCCCTACGCC CAGGTGAAGATCGAGGCCGGCAATTCGCACGTCGCCGGCGGCGGCCGCCTCGACGACTCC GTTCTGGTGCAGATGCAATGCGGCCAGCTGATGCAGCCTCTCGGTTGA

Peptide Sequence

PEP ID	Os05t0449900-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:22081376:22083466:-1 gene:Os05g0449900 transcript:Os05t0449900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os05t0449900-01)
Sequence	MMKESYMEVLPPAPAHYFVGQAAAAGGWFLPDRRGGGGAWSQEENKVFEQALAALDRNDP ERWERVALLLPGKTVADVMTHYDDLENDVCFIEAGLVPFPHYGAAGGGGGSGFTLDWDGG DDPAGLGFKRSCYMVGGKRARGPDQERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNF VTSRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNLPDDDHGNPSPSPPPSVLTAH SSSSAAAVSEQFGVLVDGKPPPPPLGRGAGHHHFMPHPYAQVKIEAGNSHVAGGGRLDDS VLVQMQCGQLMQPLG

Transcript Sequence

Transcript ID	Os05t0449900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:22081376:22083466:-1 gene:Os05g0449900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os05t0449900-01)
Sequence	ACGCGCACACGGGCGAAACCCCAACCAAGCTCCTCCTCAGCTCAGCTTCTCCTGTGCTCT GCCCTCCTCTTCTCGCAGGAGTGAGAGAAGCCGAGGAGGAGGAGGAGGAGGCTTTTGTTT GGTTGAGACGCCACAAACTCCACCAAGGGCCAATCAACGAACGCCTCGATTTCTTTTAAG CGGCGTCTCAAGGTGGAGGCCGAATCATCTGTGGCCACTTTGGCATCTGCCGGAATCGAT GCTGTAGCATCCATAAATACCGCCCTTCTCTGCCGCCCCCCATCTCCCCTCCCCCTCTTC TTCCACCTCCCAAGAGCTCGCTTTTGAGAAAGAAAGGTGAAAAATCTTGGTCGGTTGGCC CGGCCAGCCAGCCAGCCGCCTCGCGGTCGCGGAGATGATGAAGGAGTCGTACATGGAGGT GCTCCCGCCGGCGCCGGCGCACTACTTCGTCGGCCAGGCTGCGGCGGCGGGCGGGTGGTT CTTGCCGGACCGGCGCGGCGGCGGCGGAGCGTGGTCGCAGGAGGAGAACAAGGTGTTCGA GCAGGCGCTGGCGGCGCTCGACCGGAACGACCCGGAGAGGTGGGAGCGGGTGGCGCTGCT GCTGCCCGGCAAGACGGTGGCCGACGTCATGACGCACTACGACGACCTCGAGAACGACGT CTGCTTCATCGAGGCCGGCCTCGTCCCCTTCCCCCACTACGGCGCCGCCGGCGGCGGCGG CGGCTCCGGGTTCACTCTTGACTGGGACGGCGGCGATGACCCCGCCGGCCTTGGGTTCAA GCGCTCCTGCTACATGGTCGGCGGCAAGCGCGCGCGCGGCCCTGACCAGGAGCGCAAGAA GGGCGTGCCGTGGACAGAGGAGGAGCACAAGTTGTTCTTGATGGGGCTGAAGAAGTACGG CAGAGGTGACTGGAGGAACATCTCCCGCAACTTCGTGACGAGCCGGACGCCGACGCAGGT GGCCAGCCACGCGCAGAAGTACTTCATCCGGCTCAACTCCGGCGGCAAGGACAAGCGCCG CTCCAGCATCCACGACATCACCACCGTCAACCTCCCCGACGACGACCACGGCAACCCCTC GCCGTCGCCGCCGCCGTCCGTGCTCACCGCGCACTCCTCCTCCTCCGCCGCCGCCGTCTC GGAGCAGTTCGGCGTGCTCGTCGACGGCAAGCCTCCGCCGCCGCCGCTCGGCCGTGGCGC CGGGCACCACCACTTCATGCCCCATCCCTACGCCCAGGTGAAGATCGAGGCCGGCAATTC GCACGTCGCCGGCGGCGGCCGCCTCGACGACTCCGTTCTGGTGCAGATGCAATGCGGCCA GCTGATGCAGCCTCTCGGTTGACAACCCTGTTCCTGGAGCAGCAACCCACGACCAACCAT GAAAATGCTCTCGTCTCTTGGTGTGCTCGAGGAGGGAGATGCAACTCGTGCTCTTGCTTC CAACCATCAATGGAGTTCTGAAAACGAAATGATCGCAACAGCACGAAGGACAAGTAGTAA CAGCACAGTAGCCAGGCATTGCGCTGCTGCTAAATTAAGCTCCCTACTACCGTGTATCCC GGATGATGAGAGGAAGAAGAAGAAGAAGAAGAAGAATCACGAGATAGAAGAAAAAGAAGA AGAAGAAGAAGAAGCATATTGGACATGGCATCTCTGCATTTCGCATCTGTGTACATAAGA CCAAGACCAAGGTTAAATAATTAGTTCACAATTGATATTTGATACTCCATTGATTATCTC CTGTGCTATGGGAGGAGGCACAGGATGGGTACTACTACCAGCTAGACACCGTTTTTGTTG ATGTACTATTAGTCAAGTTATTATTGTCATGCAAGTATTATTTGGAGATATAGCACGTAG CAGCAGCATATTGTCTCTGTTTTTTTTTTTGTCAAGGCTCTCTAGTGTTCAGTTGAGGGT ATTAGCATTGGTCACCCTCTCATTGACCCTTGCTTTATTAATGATAATTATGGTTTTTAT CTGCTC