Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0449500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:22060910:22063720:1 gene:Os05g0449500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:coronatine insensitive 1b, F-box protein 260 description:Component of the SCF E3 ubiquitin ligase complex, Jasmonate-regulated defense responses, Regulation of leaf senescence (Os05t0449500-01)
Sequence	ATGGGAGGGGAGGCACCGGAGGCGCGGCGGTTGGACCGCGCGATGAGCTTCGGCGGCGCG GGCAGCATCCCGGAGGAGGCGCTGCACCTGGTGCTGGGGTACGTGGACGACCCGCGGGAC AGGGAGGCGGTGTCGCTCGTGTGCCGCCGCTGGCACCGCATCGACGCGCTCACGCGGAAG CACGTCACCGTGCCCTTCTGCTACGCCGCGTCGCCCGCGCACCTGCTCGCGCGGTTCCCG CGGCTGGAGTCGCTCGCGGTCAAGGGGAAGCCGCGCGCCGCCATGTACGGGCTCATCCCG GAGGACTGGGGCGCCTACGCGCGCCCCTGGGTCGCCGAGCTCGCCGCGCCGCTCGAGTGC CTCAAGGCGCTCCACCTGCGCCGCATGGTCGTCACCGACGACGACCTCGCCGCGCTCGTC CGCGCCCGCGGCCACATGCTGCAGGAGCTCAAGCTCGACAAGTGCTCCGGCTTCTCCACC GACGCTCTCCGCCTCGTCGCCCGCTCCTGCAGATCACTGAGAACATTATTTCTGGAGGAA TGCTCAATTGCTGATAATGGTACTGAATGGCTCCACGACCTTGCTGTCAACAATCCTGTT CTGGAGACATTGAACTTCCACATGACCGAACTCACAGTGGTGCCAGCTGACCTGGAGCTT CTCGCAAAGAAGTGCAAGTCACTAATTTCATTGAAGATCAGTGACTGTGACTTTTCAGAT TTAATTGGATTTTTCCGGATGGCTGCATCATTGCAAGAGTTTGCGGGAGGGGCATTCATT GAGCAAGGGGAGCTCACTAAGTATGGAAATGTTAAATTCCCTTCAAGACTGTGCTCCTTA GGACTTACGTACATGGGGACAAACGAGATGCCCATTATCTTCCCTTTCTCTGCATTACTC AAGAAGCTGGACTTGCAGTACACTTTTCTCACCACTGAAGATCACTGCCAACTCATTGCA AAATGTCCCAACTTACTAGTTCTTGCGGTGAGGAATGTGATTGGAGATAGAGGATTAGGG GTTGTTGCAGACACATGCAAGAAGCTACAAAGACTCAGAGTTGAGCGAGGAGATGATGAT CCAGGTTTGCAAGAAGAACAAGGAGGAGTCTCTCAAGTCGGGTTGACAACTGTAGCCGTA GGATGCCGTGAACTGGAATACATAGCTGCCTATGTGTCTGATATCACAAATGGGGCCCTG GAGTCTATTGGGACTTTCTGCAAAAATCTTTGCGACTTCCGTCTTGTCCTACTCGATAGA GAAGAGAGGATAACAGATTTGCCCTTAGACAATGGTGTCCGTGCACTGCTGAGGGGCTGC ACGAAACTTCGGAGGTTTGCTCTATACTTGAGACCAGGGGGACTTTCAGATACAGGCCTT GGCTATATTGGACAGTACAGTGGAATTATCCAATACATGCTTCTGGGTAATGTTGGGGAA ACAGATGATGGTCTGATCCGGTTTGCATTGGGGTGTGAGAACCTGCGGAAGCTTGAGCTA AGGAGTTGTTGCTTCAGTGAGCAAGCTTTAGCCCGCGCTATACGGAGTATGCCTTCCCTG AGATACGTGTGGGTACAGGGCTACAAGGCTTCTAAGACTGGTCACGATCTCATGCTCATG GCCAGGCCCTTCTGGAACATAGAGTTTACACCTCCCAGTTCTGAGAATGCAAATCGAATG AGAGAAGATGGTGAACCTTGTGTAGATAGTCAAGCTCAGATACTTGCATACTACTCCCTT GCCGGGAAGAGGTCGGACTGCCCACGATCTGTGGTTCCTTTGTATCCTGCGTGA

Peptide Sequence

PEP ID	Os05t0449500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:22060910:22063720:1 gene:Os05g0449500 transcript:Os05t0449500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:coronatine insensitive 1b, F-box protein 260 description:Component of the SCF E3 ubiquitin ligase complex, Jasmonate-regulated defense responses, Regulation of leaf senescence (Os05t0449500-01)
Sequence	MGGEAPEARRLDRAMSFGGAGSIPEEALHLVLGYVDDPRDREAVSLVCRRWHRIDALTRK HVTVPFCYAASPAHLLARFPRLESLAVKGKPRAAMYGLIPEDWGAYARPWVAELAAPLEC LKALHLRRMVVTDDDLAALVRARGHMLQELKLDKCSGFSTDALRLVARSCRSLRTLFLEE CSIADNGTEWLHDLAVNNPVLETLNFHMTELTVVPADLELLAKKCKSLISLKISDCDFSD LIGFFRMAASLQEFAGGAFIEQGELTKYGNVKFPSRLCSLGLTYMGTNEMPIIFPFSALL KKLDLQYTFLTTEDHCQLIAKCPNLLVLAVRNVIGDRGLGVVADTCKKLQRLRVERGDDD PGLQEEQGGVSQVGLTTVAVGCRELEYIAAYVSDITNGALESIGTFCKNLCDFRLVLLDR EERITDLPLDNGVRALLRGCTKLRRFALYLRPGGLSDTGLGYIGQYSGIIQYMLLGNVGE TDDGLIRFALGCENLRKLELRSCCFSEQALARAIRSMPSLRYVWVQGYKASKTGHDLMLM ARPFWNIEFTPPSSENANRMREDGEPCVDSQAQILAYYSLAGKRSDCPRSVVPLYPA

Transcript Sequence

Transcript ID	Os05t0449500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:22060910:22063720:1 gene:Os05g0449500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:coronatine insensitive 1b, F-box protein 260 description:Component of the SCF E3 ubiquitin ligase complex, Jasmonate-regulated defense responses, Regulation of leaf senescence (Os05t0449500-01)
Sequence	ACTCTTCTTCTCCCTCCAATAATTCTCTCCCCTCTCCTCCTCTTCACCACCACCACCACC ACCAGCAGCAGCAGAGAGCACCATCTCCATCCAATAATCCCCATGCTTGCGCACCACTCC CGGCCACATCCCGCGCGAGGAGGAGGAGGAGGAGGAGGGTGTGCTTGATCCGCGCTCCCG CCTGGTTGGTGGTGGTGGGGTGAGGGGGGAGGGATGGGAGGGGAGGCACCGGAGGCGCGG CGGTTGGACCGCGCGATGAGCTTCGGCGGCGCGGGCAGCATCCCGGAGGAGGCGCTGCAC CTGGTGCTGGGGTACGTGGACGACCCGCGGGACAGGGAGGCGGTGTCGCTCGTGTGCCGC CGCTGGCACCGCATCGACGCGCTCACGCGGAAGCACGTCACCGTGCCCTTCTGCTACGCC GCGTCGCCCGCGCACCTGCTCGCGCGGTTCCCGCGGCTGGAGTCGCTCGCGGTCAAGGGG AAGCCGCGCGCCGCCATGTACGGGCTCATCCCGGAGGACTGGGGCGCCTACGCGCGCCCC TGGGTCGCCGAGCTCGCCGCGCCGCTCGAGTGCCTCAAGGCGCTCCACCTGCGCCGCATG GTCGTCACCGACGACGACCTCGCCGCGCTCGTCCGCGCCCGCGGCCACATGCTGCAGGAG CTCAAGCTCGACAAGTGCTCCGGCTTCTCCACCGACGCTCTCCGCCTCGTCGCCCGCTCC TGCAGATCACTGAGAACATTATTTCTGGAGGAATGCTCAATTGCTGATAATGGTACTGAA TGGCTCCACGACCTTGCTGTCAACAATCCTGTTCTGGAGACATTGAACTTCCACATGACC GAACTCACAGTGGTGCCAGCTGACCTGGAGCTTCTCGCAAAGAAGTGCAAGTCACTAATT TCATTGAAGATCAGTGACTGTGACTTTTCAGATTTAATTGGATTTTTCCGGATGGCTGCA TCATTGCAAGAGTTTGCGGGAGGGGCATTCATTGAGCAAGGGGAGCTCACTAAGTATGGA AATGTTAAATTCCCTTCAAGACTGTGCTCCTTAGGACTTACGTACATGGGGACAAACGAG ATGCCCATTATCTTCCCTTTCTCTGCATTACTCAAGAAGCTGGACTTGCAGTACACTTTT CTCACCACTGAAGATCACTGCCAACTCATTGCAAAATGTCCCAACTTACTAGTTCTTGCG GTGAGGAATGTGATTGGAGATAGAGGATTAGGGGTTGTTGCAGACACATGCAAGAAGCTA CAAAGACTCAGAGTTGAGCGAGGAGATGATGATCCAGGTTTGCAAGAAGAACAAGGAGGA GTCTCTCAAGTCGGGTTGACAACTGTAGCCGTAGGATGCCGTGAACTGGAATACATAGCT GCCTATGTGTCTGATATCACAAATGGGGCCCTGGAGTCTATTGGGACTTTCTGCAAAAAT CTTTGCGACTTCCGTCTTGTCCTACTCGATAGAGAAGAGAGGATAACAGATTTGCCCTTA GACAATGGTGTCCGTGCACTGCTGAGGGGCTGCACGAAACTTCGGAGGTTTGCTCTATAC TTGAGACCAGGGGGACTTTCAGATACAGGCCTTGGCTATATTGGACAGTACAGTGGAATT ATCCAATACATGCTTCTGGGTAATGTTGGGGAAACAGATGATGGTCTGATCCGGTTTGCA TTGGGGTGTGAGAACCTGCGGAAGCTTGAGCTAAGGAGTTGTTGCTTCAGTGAGCAAGCT TTAGCCCGCGCTATACGGAGTATGCCTTCCCTGAGATACGTGTGGGTACAGGGCTACAAG GCTTCTAAGACTGGTCACGATCTCATGCTCATGGCCAGGCCCTTCTGGAACATAGAGTTT ACACCTCCCAGTTCTGAGAATGCAAATCGAATGAGAGAAGATGGTGAACCTTGTGTAGAT AGTCAAGCTCAGATACTTGCATACTACTCCCTTGCCGGGAAGAGGTCGGACTGCCCACGA TCTGTGGTTCCTTTGTATCCTGCGTGACTGTAAATACCGATATGGTATCTCTCTGCTTCG TTCTTGCCTCTTGCCTTTTTTGGGTGATATGTTGATATGTGGTTATTGTATGGGTCTAGA ACTCTAGATGGCTAGCTGCTATGTACCGTAATAAGCTACTGGTAGCTGAGATGTACTGGA ATAAGCACTTCTATTTCCCACTCTACTACTATCTAATCCTAGGAAGATGTATACTAAGGA ACACTCTGTGCCACTACTCCTTGCTTGTTCATGCTCCCGTCCTGGTTTGTTACCATTGGA GGTATAAGAATACCTGGTTTTGGC