Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0448675-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:22029223:22038152:1 gene:Os05g0448675 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0448675-00)
Sequence

ATGGAGCCAAACTACAGCGACTACCACCCCAACAGTGTCCCCTTCGATGCCTACTACGAG
CACGGCCATGGCCATCTCGACGATCATGGCCATGGCCACCACCACCTGATCCCTGCCCAT
CCTGAGCCCTCCTACTCCTACGGCAACTGGTCCTTCCTCCATGCCGATGCCACCGCAACG
TCCTCCTCCGAGTCGTCGTCGGCGTCCGCCAGCTCCGGCGCGGCGCACATTGTTGGCGCC
TCCGGTCCTTCTGCATCCTTCGTGCGGCAGCTTCATTTCGGCGGCGAGTACTACGACGAC
GACGCGGCGGACATCAGCGCCCTCATGGAAGCCGCCTCCATCTCCTGCTGGACGACGAAC
GGTGGTGCCGGTGCGTCAACGTCGCAAACCACAGGCTTGGAGGGGGTGGAGGTGATGAGG
AGAGCGGCGGCCCCGGCGCCGGACAACGGATCAAGGAAGGGAAAACGCACAAACATCTTA
CCTGTTCGCCCGTGGATCGATAGCGGCGCGGTGGAGAGGGAAGGGAGGGCTCCGGCGTCC
AGGGACGGCGAGGACGGCGGCGAGTATCGATGGTGGCGGTGGCGGCGGTGCGGGAGGGAC
CTGGTGGAGGAGAACGGCGAGGGCGGCGGGGAGGATCGATGGAGGCGGTGGCGCTGA

Peptide Sequence

PEP ID

Os05t0448675-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:22029223:22038152:1 gene:Os05g0448675 transcript:Os05t0448675-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0448675-00)
Sequence

MEPNYSDYHPNSVPFDAYYEHGHGHLDDHGHGHHHLIPAHPEPSYSYGNWSFLHADATAT
SSSESSSASASSGAAHIVGASGPSASFVRQLHFGGEYYDDDAADISALMEAASISCWTTN
GGAGASTSQTTGLEGVEVMRRAAAPAPDNGSRKGKRTNILPVRPWIDSGAVEREGRAPAS
RDGEDGGEYRWWRWRRCGRDLVEENGEGGGEDRWRRWR

Transcript Sequence

Transcript ID

Os05t0448675-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:22029223:22038152:1 gene:Os05g0448675 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0448675-00)
Sequence

ATGGAGCCAAACTACAGCGACTACCACCCCAACAGTGTCCCCTTCGATGCCTACTACGAG
CACGGCCATGGCCATCTCGACGATCATGGCCATGGCCACCACCACCTGATCCCTGCCCAT
CCTGAGCCCTCCTACTCCTACGGCAACTGGTCCTTCCTCCATGCCGATGCCACCGCAACG
TCCTCCTCCGAGTCGTCGTCGGCGTCCGCCAGCTCCGGCGCGGCGCACATTGTTGGCGCC
TCCGGTCCTTCTGCATCCTTCGTGCGGCAGCTTCATTTCGGCGGCGAGTACTACGACGAC
GACGCGGCGGACATCAGCGCCCTCATGGAAGCCGCCTCCATCTCCTGCTGGACGACGAAC
GGTGGTGCCGGTGCGTCAACGTCGCAAACCACAGGCTTGGAGGGGGTGGAGGTGATGAGG
AGAGCGGCGGCCCCGGCGCCGGACAACGGATCAAGGAAGGGAAAACGCACAAACATCTTA
CCTGTTCGCCCGTGGATCGATAGCGGCGCGGTGGAGAGGGAAGGGAGGGCTCCGGCGTCC
AGGGACGGCGAGGACGGCGGCGAGTATCGATGGTGGCGGTGGCGGCGGTGCGGGAGGGAC
CTGGTGGAGGAGAACGGCGAGGGCGGCGGGGAGGATCGATGGAGGCGGTGGCGCTGA