Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0442000-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:21640740:21641648:-1 gene:Os05g0442000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0442000-00)
Sequence

ATGAGCAGGAACAATGGTGGAAAGGGGGGGAAGCTGCAGGAGGCGCGGGTGAACCTGCCG
TCGACGCGCGGGAGAGGGGGGACGTCGTCGGGGGTGGTGGGAGGGAGCAGCTCGCCGAGG
AGGCTGTCGTCGTCGTCGTCGTCGACGGCGTCGCCGCCGAGCTCGTGCGTGTCGTCGGAG
GGGAGCCCGGAAGCGGGCGGCGGCGGCGGCGGCGGGGGGTCGTCCGGGATGATCCTGGCC
GGGTGCCCCCGGTGCATGATGTACGTGATGCTGTCGCGGGAGGACCCCAAGTGCCCCAAG
TGCCACAGCACCGTGCTCCTCGACTTCAACGACGCCGCCGCCGCCGCCGACCCGCGCCAG
GTCGGCGCCGGCAAGAGCAAGGGCAAGCATCGCGGCTGA

Peptide Sequence

PEP ID

Os05t0442000-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:21640740:21641648:-1 gene:Os05g0442000 transcript:Os05t0442000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0442000-00)
Sequence

MSRNNGGKGGKLQEARVNLPSTRGRGGTSSGVVGGSSSPRRLSSSSSSTASPPSSCVSSE
GSPEAGGGGGGGGSSGMILAGCPRCMMYVMLSREDPKCPKCHSTVLLDFNDAAAAADPRQ
VGAGKSKGKHRG

Transcript Sequence

Transcript ID

Os05t0442000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:21640740:21641648:-1 gene:Os05g0442000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0442000-00)
Sequence

TTAGCTTGGGTGCAATATGAGCAGGAACAATGGTGGAAAGGGGGGGAAGCTGCAGGAGGC
GCGGGTGAACCTGCCGTCGACGCGCGGGAGAGGGGGGACGTCGTCGGGGGTGGTGGGAGG
GAGCAGCTCGCCGAGGAGGCTGTCGTCGTCGTCGTCGTCGACGGCGTCGCCGCCGAGCTC
GTGCGTGTCGTCGGAGGGGAGCCCGGAAGCGGGCGGCGGCGGCGGCGGCGGGGGGTCGTC
CGGGATGATCCTGGCCGGGTGCCCCCGGTGCATGATGTACGTGATGCTGTCGCGGGAGGA
CCCCAAGTGCCCCAAGTGCCACAGCACCGTGCTCCTCGACTTCAACGACGCCGCCGCCGC
CGCCGACCCGCGCCAGGTCGGCGCCGGCAAGAGCAAGGGCAAGCATCGCGGCTGACACAA
CCCCTCTCACCTCGAGCGCGTACGTGCATGACGTCGCCGCCGGCCGGAGCCGAGCTAGCT
GACCTGGCCGCCGTGTACTCCAATCGTCGCCGAGCTAGCTTCTACTGCATGCGTCTTCGT
GTTCTTTCTTCTCTTATCTGTGTGTGTGTGTGTGTGACAGTGTGAGTTGATCAAAAAACG
GAATTATCACGTAGACCTGTTCTTCCATGGATCAATTGGGTGGTGCCAATGGAACGGGTC
TAGGTAATAATTTCGCGTGCGTTTAATTACTGCGTTGTCGTCGTGGTGATAGTGTTGTAG
TAGTAGTAGCGTGCAGCGTGCTGTACGTACGTACACATGTCCTGGTGACTGAAAGTGATC
GTCGATGATGATTTTAAGATCTGTACGGGGGCAGTACTACTGCTACGGATTAAGATTTTG
TCTCTCGGG