Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0440900-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:21595885:21596625:1 gene:Os05g0440900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OVATE family protein 23, ovate family protein 20, OVATE-domain containing protein 20 description:Protein of unknown function DUF623, plant domain containing protein. (Os05t0440900-00)
Sequence

ATGGCGCCATTGATGTCAGGGAGTGGTGGTGGTGGTTCTGCTCGGCGCCGCCCGCTGCGG
CAGCCGCCGGTGGTGGATGACGACGACGTCGGCTGCAGCTGCCCCAAGCAGAGGCTGCTC
CGCTCGCTCCTCTCCTCGCTGGTGTCCCGCGCGCGCGGCGCACTAGGCGGCAGGGCGGTG
TCGAGGCCCAAGTCGTCCGCGCCGCCGTCTTCGTCGGCCTCCACCACCACCACCGCCGCC
GCCGCCTTCACCTCCACCTCCACCACCGGCGCCAGCGCCACTACCGTCGACTCCTCCAAG
GAGTCGTGGGGCCCCGCGACGTACGCCGCCACCAACACGCACACGCTGTACGAGGTCGAG
GACGAGGTGAGGCGGCAGAGGAGGAAGGACATGAGGAGGAGGAGGAGGAGGAGGGCGGCG
GCGTGGGACGAGGAGGAGGAGGAGGAAGGAGCAGCGGCGGTGGCGGTGGCGGTGGAGGTG
GAGTCGGCGGCGCCGTACGAGGATTTCCGGGAGTCGATGGTGGCGATGGTGGTGGAGAAG
GAGATGTACGCGTGGGAGGAGCTGAACGCGCTGCTCCACCAGTTCCTGACCCTCAACTCG
CCGCGCCACCACGCGCTCATCCTCCACGCCTTCGCTGACCTCTGGGCCCCGCGCTCCGGC
CTCTTCTGCCCTCCCTCCCCGTGCCAAGCTCTCTGA

Peptide Sequence

PEP ID

Os05t0440900-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:21595885:21596625:1 gene:Os05g0440900 transcript:Os05t0440900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OVATE family protein 23, ovate family protein 20, OVATE-domain containing protein 20 description:Protein of unknown function DUF623, plant domain containing protein. (Os05t0440900-00)
Sequence

MAPLMSGSGGGGSARRRPLRQPPVVDDDDVGCSCPKQRLLRSLLSSLVSRARGALGGRAV
SRPKSSAPPSSSASTTTTAAAAFTSTSTTGASATTVDSSKESWGPATYAATNTHTLYEVE
DEVRRQRRKDMRRRRRRRAAAWDEEEEEEGAAAVAVAVEVESAAPYEDFRESMVAMVVEK
EMYAWEELNALLHQFLTLNSPRHHALILHAFADLWAPRSGLFCPPSPCQAL

Transcript Sequence

Transcript ID

Os05t0440900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:21595885:21596625:1 gene:Os05g0440900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OVATE family protein 23, ovate family protein 20, OVATE-domain containing protein 20 description:Protein of unknown function DUF623, plant domain containing protein. (Os05t0440900-00)
Sequence

ATGGCGCCATTGATGTCAGGGAGTGGTGGTGGTGGTTCTGCTCGGCGCCGCCCGCTGCGG
CAGCCGCCGGTGGTGGATGACGACGACGTCGGCTGCAGCTGCCCCAAGCAGAGGCTGCTC
CGCTCGCTCCTCTCCTCGCTGGTGTCCCGCGCGCGCGGCGCACTAGGCGGCAGGGCGGTG
TCGAGGCCCAAGTCGTCCGCGCCGCCGTCTTCGTCGGCCTCCACCACCACCACCGCCGCC
GCCGCCTTCACCTCCACCTCCACCACCGGCGCCAGCGCCACTACCGTCGACTCCTCCAAG
GAGTCGTGGGGCCCCGCGACGTACGCCGCCACCAACACGCACACGCTGTACGAGGTCGAG
GACGAGGTGAGGCGGCAGAGGAGGAAGGACATGAGGAGGAGGAGGAGGAGGAGGGCGGCG
GCGTGGGACGAGGAGGAGGAGGAGGAAGGAGCAGCGGCGGTGGCGGTGGCGGTGGAGGTG
GAGTCGGCGGCGCCGTACGAGGATTTCCGGGAGTCGATGGTGGCGATGGTGGTGGAGAAG
GAGATGTACGCGTGGGAGGAGCTGAACGCGCTGCTCCACCAGTTCCTGACCCTCAACTCG
CCGCGCCACCACGCGCTCATCCTCCACGCCTTCGCTGACCTCTGGGCCCCGCGCTCCGGC
CTCTTCTGCCCTCCCTCCCCGTGCCAAGCTCTCTGATGGTCTGGTCCCACCCACCAGCCG
CAAGCGATTGAGATCCTTTAC