Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0440250-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:21561375:21564322:-1 gene:Os05g0440250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone deacetylase superfamily protein. (Os05t0440250-01)
Sequence	ATGGAGTCGTCCGCCTCCTCCTCGGCCGCGGTGGCGGCGGAGGGGGCGCCGGCGACGGGG GAGCAGCTGGCGGTGTTCTGGCACGAGGGCATGGTGGCCCACGACGCCGGCCGCGGCGTG TTCGACTCGGGCCGCGACCCGGGCTTCCTCGACGTGCTCGACCAGCACCCGGAGAACGCC GACCGCGTCCGCAACATGGTCTCCATCCTCCGCCGCGGCCCCATCGCGCGCTTCATCTCC TGGCACTCCGGCCGCCCCGCCCACGCCGCCGAGCTCCTCTCCTTCCACTCCGCCGAATAC ATAGAGGAGCTCGTGCAAGCAAATGCCGTTGGTGCCAAGAAGCTGTGTGAAGGCACTTTC TTGAACCCTGGATCCTGGGGTGCTGCGCTTCTGGCGGCTGGAACAACTTTATCAGCGATG AAGCACATACTAGATGGACATGCCAAGATTGCCTATGCGTTGGTCCGCCCCCCTGGCCAT CATGCGCAACCGGACCGTGCTGATGGTTACTGCTTCCTGAACAATGCTGGGCTTGCAGTG AAGCTGGCTCTGGATTCAGGACGCAGAAAGGTTGCTGTTGTTGATATTGACGTGCACTAT GGAAATGGCACTGCGGAGGGCTTCTACCACACAGACAGCGTGCTGACGATCTCTCTTCAC ATGAAGCATGGTTCATGGGGTCCATCACATCCCCAGAGTGGCTCGGTGGATGAGATTGGT GAAGGCAGGGGTCTTGGGTACAATCTCAATATTCCTTTGCCTAATGGCAGTGGGGATGCA GGGTATGAGTATGCGATGAATGAATTAGTTGTTCCAGCCATAGAGAAGTTTCGTCCTGAG CTTTTGGTTTTTGTTGTTGGCCAAGATTCTAGTACGTTTGATCCCAATGGAAGACAGTGC TTAACCATGGATGGTTATCGGAAAATTGGGCAAATAATGAGAGGCATGGCTGATCAACAC AGCAATGGTCAAATATTGATCGTGCAGGAAGGGGGTTATCACATCAGCTATTCGGCATAT TGTCTGCATGCAACACTAGAAGGTGTTCTGAATCTACAAGCCCCGTTGCTTGATGATCCA ATCGCCTATTATCCAGAGGATGAGAAATACACCATGAAAGTTGTGGACATCATGAAGAAA TGCTGGAAAGAATCTATTCCATTCTTGAAGGACATATAG

Peptide Sequence

PEP ID	Os05t0440250-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:21561375:21564322:-1 gene:Os05g0440250 transcript:Os05t0440250-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone deacetylase superfamily protein. (Os05t0440250-01)
Sequence	MESSASSSAAVAAEGAPATGEQLAVFWHEGMVAHDAGRGVFDSGRDPGFLDVLDQHPENA DRVRNMVSILRRGPIARFISWHSGRPAHAAELLSFHSAEYIEELVQANAVGAKKLCEGTF LNPGSWGAALLAAGTTLSAMKHILDGHAKIAYALVRPPGHHAQPDRADGYCFLNNAGLAV KLALDSGRRKVAVVDIDVHYGNGTAEGFYHTDSVLTISLHMKHGSWGPSHPQSGSVDEIG EGRGLGYNLNIPLPNGSGDAGYEYAMNELVVPAIEKFRPELLVFVVGQDSSTFDPNGRQC LTMDGYRKIGQIMRGMADQHSNGQILIVQEGGYHISYSAYCLHATLEGVLNLQAPLLDDP IAYYPEDEKYTMKVVDIMKKCWKESIPFLKDI

Transcript Sequence

Transcript ID	Os05t0440250-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:21561375:21564322:-1 gene:Os05g0440250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone deacetylase superfamily protein. (Os05t0440250-01)
Sequence	ACGTAGCCCCGGAGGAAGAAGACTCTCGGTCAAGAGTCAAGACTTCGACCAATCGACCAA CACGAAGCGGCAAAGGAAACGTCACCGTCGCGGCGTCGCCGATGGAGTCGTCCGCCTCCT CCTCGGCCGCGGTGGCGGCGGAGGGGGCGCCGGCGACGGGGGAGCAGCTGGCGGTGTTCT GGCACGAGGGCATGGTGGCCCACGACGCCGGCCGCGGCGTGTTCGACTCGGGCCGCGACC CGGGCTTCCTCGACGTGCTCGACCAGCACCCGGAGAACGCCGACCGCGTCCGCAACATGG TCTCCATCCTCCGCCGCGGCCCCATCGCGCGCTTCATCTCCTGGCACTCCGGCCGCCCCG CCCACGCCGCCGAGCTCCTCTCCTTCCACTCCGCCGAATACATAGAGGAGCTCGTGCAAG CAAATGCCGTTGGTGCCAAGAAGCTGTGTGAAGGCACTTTCTTGAACCCTGGATCCTGGG GTGCTGCGCTTCTGGCGGCTGGAACAACTTTATCAGCGATGAAGCACATACTAGATGGAC ATGCCAAGATTGCCTATGCGTTGGTCCGCCCCCCTGGCCATCATGCGCAACCGGACCGTG CTGATGGTTACTGCTTCCTGAACAATGCTGGGCTTGCAGTGAAGCTGGCTCTGGATTCAG GACGCAGAAAGGTTGCTGTTGTTGATATTGACGTGCACTATGGAAATGGCACTGCGGAGG GCTTCTACCACACAGACAGCGTGCTGACGATCTCTCTTCACATGAAGCATGGTTCATGGG GTCCATCACATCCCCAGAGTGGCTCGGTGGATGAGATTGGTGAAGGCAGGGGTCTTGGGT ACAATCTCAATATTCCTTTGCCTAATGGCAGTGGGGATGCAGGGTATGAGTATGCGATGA ATGAATTAGTTGTTCCAGCCATAGAGAAGTTTCGTCCTGAGCTTTTGGTTTTTGTTGTTG GCCAAGATTCTAGTACGTTTGATCCCAATGGAAGACAGTGCTTAACCATGGATGGTTATC GGAAAATTGGGCAAATAATGAGAGGCATGGCTGATCAACACAGCAATGGTCAAATATTGA TCGTGCAGGAAGGGGGTTATCACATCAGCTATTCGGCATATTGTCTGCATGCAACACTAG AAGGTGTTCTGAATCTACAAGCCCCGTTGCTTGATGATCCAATCGCCTATTATCCAGAGG ATGAGAAATACACCATGAAAGTTGTGGACATCATGAAGAAATGCTGGAAAGAATCTATTC CATTCTTGAAGGACATATAGAAATCCATTTCTTTTAGATGCGAGTGCCCTTGAACCTCAA TTTCATATCAGTGCACCGTCTATTCTTATGGCCTTTTGACTGAAAGTACATGCATTCATT GGAGCAACATTCGAGTGCTTGTTCCTTTCATAAACCCCTGATTCACAAGTTCTCAATTCA CATTGGTATTGTACATACATCATGTCAAACTCTACCATCTTATATTTGTGGACCTCAATT GCTGCGCCTAATAAGTAACGCTGACTAACAGATGGGCTGTTTGATTATGCAATGGGGCAT TGGGGCTACAGCCACCTGTATTATATAAGCGCACCAGTTCCAAGTCTGAAACCAAGTGCC AAGTCTGAATTATTGTCTAGCAAGGAATGCTACCTGCTGCCACATCACTCGTCAACTTAC TGCCTACAGCAATACTGGAAGGTAATTTTTCAATATGACTACTGCTAGTGCTAGGTGATC CAATTGCTTGCCACCCAGTGAATGAATCGTCCATCTGTTGCAAAAGCTGGTCACACTGCC AAGAAATGCCAGAAAGAATCAAATTCCTTTGGAAGTGGCTCTTTGGAAGGAATACATCCA TCTTCTTGTGATTTGCGGGTGTCATCTCGCTCCATGGAACCATATTCTACCTGCGTCAGC GACTTATCTCCGATGATTTTTTGCAGCAAATCATACGCGCCGCAAATGCTTTTTCAGGCG GTGCGATGCGTCGATCTCTATCGAGGCGGTTTCTTTTCCGAGTCCGTGTGTTTGTGGTGA ACTGCTCCGTCGTATGGCTGCAATGCTATGCAAAAATTTTGCTCGGTTGCTTGCTTTCGC ACCTGGAGTTCTTGAAGAATTCTGTACAGGTGGACTTTTATCTGAAATTCTCTGGTCAAC TTCATCTCCC