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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0440000-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:21555553:21556609:1 gene:Os05g0440000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA BINDING WITH ONE FINGER 29 description:Zinc finger, Dof-type family protein. (Os05t0440000-00)
Sequence

ATGCTGTCTTCTCACTGTGAGAGCATGCTGGCGTACGCGGCGGCGGCCGGGCGGCGAGCG
GTGGTGGTCGACCACCACCAACGGCGGTACAGGCCGAACGTGGAGGTTGCGCCCAACTGC
CCGCGGTGCGAGTCGCCCAACACCAAGTTCTGCTACTACAACAACTACAGCCTCAGCCAG
CCGCGCTACTTCTGCAAGGGGTGCCGCCGCTACTGGACCAAGGGCGGCTCGCTCCGGAAC
GTGCCCGTCGGCGGCGGGTGCCGCAAGAACCGGCGGGGCAAGGCGGTGCGCGCCATGGTC
GGGGAGACGATGACGGCGCGCGGCGGCGGCGGCGGCGGCGCGGCGGCGTTCTCTCACCGG
TTCCACGGGCCCGTCCGGCCCGACATGATCCTGGAAGGCATGGCCGGCAGCACGGCCGCC
TCCGCCGGCCTCGGCGAGCAGCCGGGTGTGGCGGCGCCGGACGAGAAGCCCGCCGCGGCG
GACGGCTCCACGATTGACCTGGCCTTGCTGTACGCCAAGTTCTTGAACCACCACCAGCCT
ACTATGGCGGAGCAGGGCGGTGGCGCCGCCGTGCCGGAATCGGTCGACACCTCGAGCGGG
TCATCGAGCGATCGCACGACGAGCCCGGCCGCCGCGCAGCCTGCGGCGGCGGCGGCGTAC
GGCCCGGGGCAAGACGGGCTCGTCGGCGAGCCGATCAGCACGGAGGAGCACGGTGCAGCA
GCCATGGCGCGGTGCGCGCAGGCGCTCGGGGAGCTCAACTTCAGCGTGGACCAGATCAGC
TGCTACACCTCGCTGGGGTTGCCAACGACGGACGGCGGAGATCTGATCCTGCCGTCGACG
CTGGACCAGCATGCCAAGTACGAGCCGTTCGATTCGCTCCCCGAGGACGCGCTCAGCCTC
CACGACATCATCTCCGGCGACGACGATGTCTGGTGCAACGCGTTGGGTTGCCAAGGACTG
GAAGCAGCTCTCTGCAGGCCATGA

Peptide Sequence

PEP ID

Os05t0440000-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:21555553:21556609:1 gene:Os05g0440000 transcript:Os05t0440000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA BINDING WITH ONE FINGER 29 description:Zinc finger, Dof-type family protein. (Os05t0440000-00)
Sequence

MLSSHCESMLAYAAAAGRRAVVVDHHQRRYRPNVEVAPNCPRCESPNTKFCYYNNYSLSQ
PRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGKAVRAMVGETMTARGGGGGGAAAFSHR
FHGPVRPDMILEGMAGSTAASAGLGEQPGVAAPDEKPAAADGSTIDLALLYAKFLNHHQP
TMAEQGGGAAVPESVDTSSGSSSDRTTSPAAAQPAAAAAYGPGQDGLVGEPISTEEHGAA
AMARCAQALGELNFSVDQISCYTSLGLPTTDGGDLILPSTLDQHAKYEPFDSLPEDALSL
HDIISGDDDVWCNALGCQGLEAALCRP

Transcript Sequence

Transcript ID

Os05t0440000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:21555553:21556609:1 gene:Os05g0440000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA BINDING WITH ONE FINGER 29 description:Zinc finger, Dof-type family protein. (Os05t0440000-00)
Sequence

GATGCTGTCTTCTCACTGTGAGAGCATGCTGGCGTACGCGGCGGCGGCCGGGCGGCGAGC
GGTGGTGGTCGACCACCACCAACGGCGGTACAGGCCGAACGTGGAGGTTGCGCCCAACTG
CCCGCGGTGCGAGTCGCCCAACACCAAGTTCTGCTACTACAACAACTACAGCCTCAGCCA
GCCGCGCTACTTCTGCAAGGGGTGCCGCCGCTACTGGACCAAGGGCGGCTCGCTCCGGAA
CGTGCCCGTCGGCGGCGGGTGCCGCAAGAACCGGCGGGGCAAGGCGGTGCGCGCCATGGT
CGGGGAGACGATGACGGCGCGCGGCGGCGGCGGCGGCGGCGCGGCGGCGTTCTCTCACCG
GTTCCACGGGCCCGTCCGGCCCGACATGATCCTGGAAGGCATGGCCGGCAGCACGGCCGC
CTCCGCCGGCCTCGGCGAGCAGCCGGGTGTGGCGGCGCCGGACGAGAAGCCCGCCGCGGC
GGACGGCTCCACGATTGACCTGGCCTTGCTGTACGCCAAGTTCTTGAACCACCACCAGCC
TACTATGGCGGAGCAGGGCGGTGGCGCCGCCGTGCCGGAATCGGTCGACACCTCGAGCGG
GTCATCGAGCGATCGCACGACGAGCCCGGCCGCCGCGCAGCCTGCGGCGGCGGCGGCGTA
CGGCCCGGGGCAAGACGGGCTCGTCGGCGAGCCGATCAGCACGGAGGAGCACGGTGCAGC
AGCCATGGCGCGGTGCGCGCAGGCGCTCGGGGAGCTCAACTTCAGCGTGGACCAGATCAG
CTGCTACACCTCGCTGGGGTTGCCAACGACGGACGGCGGAGATCTGATCCTGCCGTCGAC
GCTGGACCAGCATGCCAAGTACGAGCCGTTCGATTCGCTCCCCGAGGACGCGCTCAGCCT
CCACGACATCATCTCCGGCGACGACGATGTCTGGTGCAACGCGTTGGGTTGCCAAGGACT
GGAAGCAGCTCTCTGCAGGCCATGATTTTTTTTATTATTATTTTTCACTCCTCTCGATCT
CCTCGTTGATTTGCTGCTGTTCTTGTTGCGATCGATC