Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0439400-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:21525171:21526731:1 gene:Os05g0439400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 44, U-box protein 44 description:Similar to Arm repeat containing protein. (Os05t0439400-01)
Sequence	ATGGACGCGGCGGTCGCCGGGCAGCACGCGAGGCGGCGGATCCGGCCGCCGGAGCCGCTG GTGATGGCCGGGTCGCCGTCGACGCCCGCCGCCTTCCGGTGCCCGATCTCGCTGGAGGTG ATGCGGTCGCCGGTGAGCCTGCCCACCGGCGCCACGTACGACCGGGCGTCCATACAGCGG TGGCTCGATACCGGCCACCGCACCTGCCCGGCCACGCGGCTCCCGCTGGCGTCCACCGAC CTCGTCCCCAACCTGCTCCTGCGCCGGCTCATACACCTGCACGCCGCCACGCTGCCGCCC TCGCCCTCCCCGGAGGTGGTGCTCTCGCAGCTCGCGGCGGCGGGCGGGGAGCCCGCCGCG GCGGAGAAGGCCGTGCGCTCGCTCGCCGCCAAGATCGCCCCGGAGAAAGGGAAGCGGGCA TCCGTCGCGTCCGCCGTCGCCGCTGACCTTGACTCCGCCGTGCCGGCCCTCCTCTCCTTC GCCAAGGGCGGGGCGGGCGCCGACGCGCGCGTCGACGCGGTGAGGATCCTGGCCACGGTG GCTCCCGAGCTGGTCCCTTACTTGACCGGAGACGGGACGGAGAAGCGCGGGAGGGTCAGG ATGGCCGTCGAGGCCTTGGCCGCCGTCTTGTCCGCGGACGGGGTAGGCGAAGACACCAAG GAAGGCCTCATCGCCGCCCTCGTAGCCGGCGATCTGGGCCACATCGTGAACACGCTCATC GCCGCGGGTGCTAATGGCGTCATGGTTCTCGAGACGATCCTGACATCGCCCGTTCCGGAC GCCGACGCCAAGACGGCCATCGCCGACAGGTCAGAGCTGTTCCCGGATCTGGTACGGATC CTCAAGGACGCCGCATCGCCGGCGGCAATCCGCTGCATGGCGGCGGCCGTGCAGGTGCGA GGCCGGCCCGCTCGCTCGTCGATGGTCCGGGCAGGCGCCATCCCGGCGCTCGCGCTGGCC GTCGCGGCGGCGCCCACGGCCGTGGCGGAGTCCGCCCTGGGGCTACTGGTAGAGGCCGCC CGCTGCACCGATGGCAAAGCGGCCATCGGCGCCGACGCGGCGGAGGTAGCGGCGGCCGTG ATGGGGCGGATGATCCGGGTCGGGCCGGCGGGGCGCGAGTTCGCCGTGGCAGTGCTTTGG CTGTCCTGCTGCGCCGGGGGAGGCGACCGGAGGATGAGGGAGGCAGTGGCGTCCGCGCCG GAGGCCGTGGGGAAGCTGCTCGTGGTGATGCAAGGGGATTGCTCGCCGTCGACGTCGCGG ATGGCCGGCGAGCTGCTCCGGGCGGTGAGGATGGAGCAGGAAAGGAAGGGCCTCGCCGCC GCCTACGACAGCCGCACCATCCATGTCATGCCTTACTGA

Peptide Sequence

PEP ID	Os05t0439400-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:21525171:21526731:1 gene:Os05g0439400 transcript:Os05t0439400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 44, U-box protein 44 description:Similar to Arm repeat containing protein. (Os05t0439400-01)
Sequence	MDAAVAGQHARRRIRPPEPLVMAGSPSTPAAFRCPISLEVMRSPVSLPTGATYDRASIQR WLDTGHRTCPATRLPLASTDLVPNLLLRRLIHLHAATLPPSPSPEVVLSQLAAAGGEPAA AEKAVRSLAAKIAPEKGKRASVASAVAADLDSAVPALLSFAKGGAGADARVDAVRILATV APELVPYLTGDGTEKRGRVRMAVEALAAVLSADGVGEDTKEGLIAALVAGDLGHIVNTLI AAGANGVMVLETILTSPVPDADAKTAIADRSELFPDLVRILKDAASPAAIRCMAAAVQVR GRPARSSMVRAGAIPALALAVAAAPTAVAESALGLLVEAARCTDGKAAIGADAAEVAAAV MGRMIRVGPAGREFAVAVLWLSCCAGGGDRRMREAVASAPEAVGKLLVVMQGDCSPSTSR MAGELLRAVRMEQERKGLAAAYDSRTIHVMPY

Transcript Sequence

Transcript ID	Os05t0439400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:21525171:21526731:1 gene:Os05g0439400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 44, U-box protein 44 description:Similar to Arm repeat containing protein. (Os05t0439400-01)
Sequence	ACGACTGACTCATCATCATCCCCACGGGGCAATCGCCATGGACGCGGCGGTCGCCGGGCA GCACGCGAGGCGGCGGATCCGGCCGCCGGAGCCGCTGGTGATGGCCGGGTCGCCGTCGAC GCCCGCCGCCTTCCGGTGCCCGATCTCGCTGGAGGTGATGCGGTCGCCGGTGAGCCTGCC CACCGGCGCCACGTACGACCGGGCGTCCATACAGCGGTGGCTCGATACCGGCCACCGCAC CTGCCCGGCCACGCGGCTCCCGCTGGCGTCCACCGACCTCGTCCCCAACCTGCTCCTGCG CCGGCTCATACACCTGCACGCCGCCACGCTGCCGCCCTCGCCCTCCCCGGAGGTGGTGCT CTCGCAGCTCGCGGCGGCGGGCGGGGAGCCCGCCGCGGCGGAGAAGGCCGTGCGCTCGCT CGCCGCCAAGATCGCCCCGGAGAAAGGGAAGCGGGCATCCGTCGCGTCCGCCGTCGCCGC TGACCTTGACTCCGCCGTGCCGGCCCTCCTCTCCTTCGCCAAGGGCGGGGCGGGCGCCGA CGCGCGCGTCGACGCGGTGAGGATCCTGGCCACGGTGGCTCCCGAGCTGGTCCCTTACTT GACCGGAGACGGGACGGAGAAGCGCGGGAGGGTCAGGATGGCCGTCGAGGCCTTGGCCGC CGTCTTGTCCGCGGACGGGGTAGGCGAAGACACCAAGGAAGGCCTCATCGCCGCCCTCGT AGCCGGCGATCTGGGCCACATCGTGAACACGCTCATCGCCGCGGGTGCTAATGGCGTCAT GGTTCTCGAGACGATCCTGACATCGCCCGTTCCGGACGCCGACGCCAAGACGGCCATCGC CGACAGGTCAGAGCTGTTCCCGGATCTGGTACGGATCCTCAAGGACGCCGCATCGCCGGC GGCAATCCGCTGCATGGCGGCGGCCGTGCAGGTGCGAGGCCGGCCCGCTCGCTCGTCGAT GGTCCGGGCAGGCGCCATCCCGGCGCTCGCGCTGGCCGTCGCGGCGGCGCCCACGGCCGT GGCGGAGTCCGCCCTGGGGCTACTGGTAGAGGCCGCCCGCTGCACCGATGGCAAAGCGGC CATCGGCGCCGACGCGGCGGAGGTAGCGGCGGCCGTGATGGGGCGGATGATCCGGGTCGG GCCGGCGGGGCGCGAGTTCGCCGTGGCAGTGCTTTGGCTGTCCTGCTGCGCCGGGGGAGG CGACCGGAGGATGAGGGAGGCAGTGGCGTCCGCGCCGGAGGCCGTGGGGAAGCTGCTCGT GGTGATGCAAGGGGATTGCTCGCCGTCGACGTCGCGGATGGCCGGCGAGCTGCTCCGGGC GGTGAGGATGGAGCAGGAAAGGAAGGGCCTCGCCGCCGCCTACGACAGCCGCACCATCCA TGTCATGCCTTACTGAAACCAAAACCACACCTCTGTACTCTACTCGTGTAATTTTCTTAC TAAGCTAACCCCTGGCCATAATGCCGTGAAAAAAATCACTACTCGGGGTTTGCTATGAAT TTAGCGCAATTTAGGGCATCATCTGCTTGCAGAAATATATATATGCTGCTTCCGTTCGAG C