Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0439000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:21509426:21510614:-1 gene:Os05g0439000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1O (RING-H2 finger protein ATL11). (Os05t0439000-01)
Sequence	ATGGACGCGCCGCGGCTGCACCATTCCGCCAGGGCGCTCCTCCTCGTGGCGCCGAGCGCG TCTCCCGCGCCGGCGGCGGTGCCACCAGGAGTCGCCGGCGCTCTGCCGGTCGCCGAGAAT GGCCGCGGCGGTCCCCTCGCCGTGTCGTCGCTCAACACCAACACCATCGTCCTGCTCGCG CTCCTCGTCTGCGGCCTCGTCGCCGCCGTCGCGCTCCACGTCGTACTCCAGTGCGCGCTC CGCGTCACGCGGCGCGCGTGCTACGGCGCGGAGACCGCCGCCGCCGCCGCTGCAGGAGGA GGAGGAGAAGGAGGCCGCGCGAGGCGGGGTGGCGGAGGCGGGGGCAGGAAGCGGACGCCG CCGCTGTCGAAGACGATCCCGCGCGTGGCGTACACGGAGGGGCTCGAGCTGGCCGGGTCG TCGCGGTCGGAGTGCGTGATATGCCTCGCCGAGTTCGCGCGCGGGGAGCACGTGCGCGTG CTGCCGGGCTGCAACCACGGCTTCCACGACCGCTGCATTGACCGGTGGCTCGCGGCGCGG CCGACGTGCCCCACGTGCAGGCAGGCGCCGTTCGCCGCCGCCGCCGCCGATCCCGTCGCG CCGCCGGACCCTGCACCGGCGGCCGTGCAGGTGGTGCGAGTCATAGTACTCACTAGTCAA TAG

Peptide Sequence

PEP ID	Os05t0439000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:21509426:21510614:-1 gene:Os05g0439000 transcript:Os05t0439000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1O (RING-H2 finger protein ATL11). (Os05t0439000-01)
Sequence	MDAPRLHHSARALLLVAPSASPAPAAVPPGVAGALPVAENGRGGPLAVSSLNTNTIVLLA LLVCGLVAAVALHVVLQCALRVTRRACYGAETAAAAAAGGGGEGGRARRGGGGGGRKRTP PLSKTIPRVAYTEGLELAGSSRSECVICLAEFARGEHVRVLPGCNHGFHDRCIDRWLAAR PTCPTCRQAPFAAAAADPVAPPDPAPAAVQVVRVIVLTSQ

Transcript Sequence

Transcript ID	Os05t0439000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:21509426:21510614:-1 gene:Os05g0439000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1O (RING-H2 finger protein ATL11). (Os05t0439000-01)
Sequence	ACAAAGTAGCTAGTTCACTCTTAGCTAGCTCCGACGTGATCGATCGCGCGAGCTAGCTAA CTAAGCTGCTTCGTCGTCGTCGCTCGCTCATGGACGCGCCGCGGCTGCACCATTCCGCCA GGGCGCTCCTCCTCGTGGCGCCGAGCGCGTCTCCCGCGCCGGCGGCGGTGCCACCAGGAG TCGCCGGCGCTCTGCCGGTCGCCGAGAATGGCCGCGGCGGTCCCCTCGCCGTGTCGTCGC TCAACACCAACACCATCGTCCTGCTCGCGCTCCTCGTCTGCGGCCTCGTCGCCGCCGTCG CGCTCCACGTCGTACTCCAGTGCGCGCTCCGCGTCACGCGGCGCGCGTGCTACGGCGCGG AGACCGCCGCCGCCGCCGCTGCAGGAGGAGGAGGAGAAGGAGGCCGCGCGAGGCGGGGTG GCGGAGGCGGGGGCAGGAAGCGGACGCCGCCGCTGTCGAAGACGATCCCGCGCGTGGCGT ACACGGAGGGGCTCGAGCTGGCCGGGTCGTCGCGGTCGGAGTGCGTGATATGCCTCGCCG AGTTCGCGCGCGGGGAGCACGTGCGCGTGCTGCCGGGCTGCAACCACGGCTTCCACGACC GCTGCATTGACCGGTGGCTCGCGGCGCGGCCGACGTGCCCCACGTGCAGGCAGGCGCCGT TCGCCGCCGCCGCCGCCGATCCCGTCGCGCCGCCGGACCCTGCACCGGCGGCCGTGCAGG TGGTGCGAGTCATAGTACTCACTAGTCAATAGCTGGTACCCATGGTGGCATACTGGCATG AGCTGCTTAGACGTGGTCGATCGCCTCGTGTGCAGCGGCCGCGCCACTGTGTCCACAGCT AGTATACAGTGTGTGTTGCCGACTTGGCGAGTTGGCGTGTGTCGCCGAATCGGCAAACGT TTCGAAGCCGTTACACTTGGTAAAGTGGGCGATGGATGTGTAGGGGTGTACAAGTGTTCG GGCCTATGCATATTGCACGCAGGAGCAGGACACGATGGTACGAAGCCGAATCGAGGCGAA ACGGGAGTAATCTGCCCTGCCGGGTTCCCTGCGGACTGTCAGCCTTTGACGCTGTGAGTC TGTGACAAGCACTTTTTTTTTTTAGCAAAACAGACCATGTCCTGTGAGATGGTGACAAAG CACAAGTGTTACACATTTTTCCCTTTGTATATGTGCATGTAAATTTTGC