Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0437900-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:21460347:21463248:-1 gene:Os05g0437900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tubby-like protein 1, tubby-like protein 8, F-box protein 259 description:Tubby family protein. (Os05t0437900-01);Similar to Tubby-like F-box protein 8. (Os05t0437900-03)
Sequence	ATGTCGTTTCGCAGCATTGTTCGTGATGTTAGGGATAGTTTTGGTAGCCTGTCGAGGCGA AGCTTTGAGGTCACCCTGGCTGGTCTATCGGGGCTTACCGGCCACCATAGAGGCAAGTCT CAGAGTACGGTTCACGAGCTCTGTGATGCAGATCTCATAATCCAGGAGAGTCGTTGGGCT AGCCTCCCTCCTGAGCTCCTCCGCGATGTGATCCGGAGGCTGGAGGCTAGTGAGAGCACC TGGCCGTCACGCAAGGATGTCGTGTCCTGTGCTGCCGTCTGTAAGGCATGGAGGGAGATG TGTAAAGAGATTGTGCTGAGCCCGGAGTTTTGCGGGAAGCTTACCTTCCCGCTCTCTCTA AAGCAGCCTGGCCCTCGAGATGGAATGATTCAATGTTTCATAAAGCGGGATAAATCTAAA TCAACTTATCATCTCTACTTGTGCCTGAGTACTGCTGTACTTGCGGATAGTGGCAAGTTC CTCTTGTCCGCTAAAAGGCACCGCAAAACAACCTGCACAGAATATGTTATCTCAATGGAT GCAGACAACATTTCAAGATCAAGCAGCACCTATATTGGAAAACTAAGGTCAAACTTCCTT GGCACAAAATTTATAATCTATGACACACAGCCCTCTTATAATGGGGCTGTAATCCCTCCT GTTGGACGGAGCAGCCGAAGATTCAACTCCAAGAAAGTGTCTCCTAAGATGCCGTCTGGT AGTTATAACATAGCTCAGGTGACATATGAGCTTAATGTTCTTGGCACCAGGGGCCCTAGG CGGATGCACTGTGTCATGCACTCCATACCTGCCTCCTCAGTCGAGCCTGGTGGCATTGTC CCTGGCCAGCCCGAGCAGATTGTTCCCCGAGCTTTCGAGGAGTCATTTCGCAGCACCACC TCCTTTTCTAAGTCATCCATCATGGATCGGTCCATGGATTTCAGTAGTTCCCGTGATTTC AGCAGTGCTCGCTTTTCAGACATTGCTGGAGGCACCATAAATGGTGATGAAGAGGGGCAA AATAAGGAGAGGCCACTAGTGCTTCGCAACAAGGCCCCTAGGTGGCATGAGCAGCTCCAA TGCTGGTGCCTTAATTTCCGTGGGCGTGTAACCATTGCGTCGGTAAAGAATTTCCAGTTG ATTGCTGCACCAGCACAGCCTCCCGCAGGGGCTCCAACTCCGTCACAACCTGCTCCACCA GAGCAGGACAAGATTATTCTACAGTTTGGTAAGGTAGCAAAAGATATGTTCACAATGGAT TACCGCTATCCGCTCTCAGCTTTCCAGGCATTTGCAATATGTTTAAGTAGCTTCGACACA AAACTGGCCTGCGAATGA

Peptide Sequence

PEP ID	Os05t0437900-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:21460347:21463248:-1 gene:Os05g0437900 transcript:Os05t0437900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tubby-like protein 1, tubby-like protein 8, F-box protein 259 description:Tubby family protein. (Os05t0437900-01);Similar to Tubby-like F-box protein 8. (Os05t0437900-03)
Sequence	MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESRWA SLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSL KQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMD ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPSG SYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAFEESFRSTT SFSKSSIMDRSMDFSSSRDFSSARFSDIAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQ CWCLNFRGRVTIASVKNFQLIAAPAQPPAGAPTPSQPAPPEQDKIILQFGKVAKDMFTMD YRYPLSAFQAFAICLSSFDTKLACE

Transcript Sequence

Transcript ID	Os05t0437900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:21460347:21463248:-1 gene:Os05g0437900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tubby-like protein 1, tubby-like protein 8, F-box protein 259 description:Tubby family protein. (Os05t0437900-01);Similar to Tubby-like F-box protein 8. (Os05t0437900-03)
Sequence	GAGTACTCGAGTATCTTCCCCGTTCCTTCCCTTGGCGTAAGAGAACGAGAAATCTCCCAT CTCTCAGTCGTCTCCCCCGCTTCCTTGCGCCAAGACGAGTCGCGGCTGAGCAGGAGAGGG GCGCCGATCTCCATCCGGCGAGCAGAGCAGGGGAGGGGATCCTGGTATAGATTGTTGATT GCTTGTGCGTGAACACAACTAAAGCAGTAATTCTTACCGTGTCAGCGTGATCTGGGACTG TGGCCAATTGTACCATAAGTGGAAACACAGCTGCGAAGATTGTCGGTGGTCTTCGCTGAT AATATATTGGGCAGGCTAAGTTTCAAGTTCAGTTTGCTGAATTCAGCGAGCCTAGATGTC GTTTCGCAGCATTGTTCGTGATGTTAGGGATAGTTTTGGTAGCCTGTCGAGGCGAAGCTT TGAGGTCACCCTGGCTGGTCTATCGGGGCTTACCGGCCACCATAGAGGCAAGTCTCAGAG TACGGTTCACGAGCTCTGTGATGCAGATCTCATAATCCAGGAGAGTCGTTGGGCTAGCCT CCCTCCTGAGCTCCTCCGCGATGTGATCCGGAGGCTGGAGGCTAGTGAGAGCACCTGGCC GTCACGCAAGGATGTCGTGTCCTGTGCTGCCGTCTGTAAGGCATGGAGGGAGATGTGTAA AGAGATTGTGCTGAGCCCGGAGTTTTGCGGGAAGCTTACCTTCCCGCTCTCTCTAAAGCA GCCTGGCCCTCGAGATGGAATGATTCAATGTTTCATAAAGCGGGATAAATCTAAATCAAC TTATCATCTCTACTTGTGCCTGAGTACTGCTGTACTTGCGGATAGTGGCAAGTTCCTCTT GTCCGCTAAAAGGCACCGCAAAACAACCTGCACAGAATATGTTATCTCAATGGATGCAGA CAACATTTCAAGATCAAGCAGCACCTATATTGGAAAACTAAGGTCAAACTTCCTTGGCAC AAAATTTATAATCTATGACACACAGCCCTCTTATAATGGGGCTGTAATCCCTCCTGTTGG ACGGAGCAGCCGAAGATTCAACTCCAAGAAAGTGTCTCCTAAGATGCCGTCTGGTAGTTA TAACATAGCTCAGGTGACATATGAGCTTAATGTTCTTGGCACCAGGGGCCCTAGGCGGAT GCACTGTGTCATGCACTCCATACCTGCCTCCTCAGTCGAGCCTGGTGGCATTGTCCCTGG CCAGCCCGAGCAGATTGTTCCCCGAGCTTTCGAGGAGTCATTTCGCAGCACCACCTCCTT TTCTAAGTCATCCATCATGGATCGGTCCATGGATTTCAGTAGTTCCCGTGATTTCAGCAG TGCTCGCTTTTCAGACATTGCTGGAGGCACCATAAATGGTGATGAAGAGGGGCAAAATAA GGAGAGGCCACTAGTGCTTCGCAACAAGGCCCCTAGGTGGCATGAGCAGCTCCAATGCTG GTGCCTTAATTTCCGTGGGCGTGTAACCATTGCGTCGGTAAAGAATTTCCAGTTGATTGC TGCACCAGCACAGCCTCCCGCAGGGGCTCCAACTCCGTCACAACCTGCTCCACCAGAGCA GGACAAGATTATTCTACAGTTTGGTAAGGTAGCAAAAGATATGTTCACAATGGATTACCG CTATCCGCTCTCAGCTTTCCAGGCATTTGCAATATGTTTAAGTAGCTTCGACACAAAACT GGCCTGCGAATGAGGGAAACAGTGAGCTCTAATGGAGGCAGAACTGGAAATGCAACAGAG AGCAACTTGAGAAATGTAATGCCCAAGGGCTCTAGATCATGTTTGCATTTTGTTGTGTCG TCTTGGCTGTATTTCTGCTTGTAGCCTGGAACTGGATTTCTCAGCCTGTATGTTTCACCT GGTAGCACCATGATAGGTTTCCTTTGGGACAGCGGTTCATGCATTGCATTTTTCCATTTG TGTGGTGTACATGCGGTTCCGGATTTAAGCTGAAAGGATCCGTTCATGTCTTTGTTAAGC TTTGCATGGATGCCGTGTTCTGGT