Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0437500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:21427773:21431587:-1 gene:Os05g0437500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Yip1 domain containing protein. (Os05t0437500-01)
Sequence	ATGTCGCACGGCGACACCATCCCGCTCCACTCCTCGTCCGCGCAGTCGGACATGGACGAG ATCGAGAGCCTCATCCACGCGGCGCCGCCCTCCGCGGCCGCGGTGCTCCCCGCGCGGCCG CCGTCGCCTCCGCGGGCCTCGATCCCCGTCTCCAGCTCGCCCCCCCTGCTGCCTCCTCCG GTGGCCGGGTCCAAGCCGCAGCTCCCCCCGTTCTCCTCCTCCTCCTCCGTGGCGTCGTCG TCGTCTCCGCCGCTCCCCTCCTCCGTCTCGGTCGCCATCGCCGGCGACGGGTTCGGCCCC CCGCCCAACACGCTCACCGAGCCCGTGTTGGACACCGTCAAGCGCGACCTCGCTCGCATC GTCAGCAACCTCAAGCTCGTCGTCTTCCCAAACCCTTTCCGTGAGGACCCCGGGAAGGCG CTGCGCGACTGGGATCTCTGGGGCCCTTTCTTCTTCATCGTCTTCCTCGGCCTCACCCTC TCCTGGTCAGCCTCCGTCAAGAAGTCTGAAGTGTTTGCTGTTGCTTTTGCTGTACTAGCT GCTGGTGCTATAATTCTCACATTGAATGTGCTGCTCCTGGGTGGGCGCATCAACTTCTTT CAGAGCCTGAGTCTTCTTGGATACTGCCTGTTCCCTTTGGATGTCGGAGCTTTGATTTGC ATGCTGAAGGATAATGTACTACTGAAGATCATTGCAGTAGTGGTTACATTGGCCTGGAGC TCCTGGGCAGCATATCCATTCATGAGTGCTGCTGTTAACCCAAGGAGAAAGGCGTTGGCA CTATATCCTGTCTTCCTTATGTACGTCTCTGTTGGGTTCCTCATCATCGCAATAGATTAA

Peptide Sequence

PEP ID	Os05t0437500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:21427773:21431587:-1 gene:Os05g0437500 transcript:Os05t0437500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Yip1 domain containing protein. (Os05t0437500-01)
Sequence	MSHGDTIPLHSSSAQSDMDEIESLIHAAPPSAAAVLPARPPSPPRASIPVSSSPPLLPPP VAGSKPQLPPFSSSSSVASSSSPPLPSSVSVAIAGDGFGPPPNTLTEPVLDTVKRDLARI VSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFAVLA AGAIILTLNVLLLGGRINFFQSLSLLGYCLFPLDVGALICMLKDNVLLKIIAVVVTLAWS SWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID

Transcript Sequence

Transcript ID	Os05t0437500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:21427773:21431587:-1 gene:Os05g0437500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Yip1 domain containing protein. (Os05t0437500-01)
Sequence	GATTCGCGCACACGTCTCCACCCTCTCTCCCCGCCGCCGTCGCGACTCGCGATCGCACGG TAAAATCGCCGCCGGTGGGCACACCGCCGCCGCGATGTCGCACGGCGACACCATCCCGCT CCACTCCTCGTCCGCGCAGTCGGACATGGACGAGATCGAGAGCCTCATCCACGCGGCGCC GCCCTCCGCGGCCGCGGTGCTCCCCGCGCGGCCGCCGTCGCCTCCGCGGGCCTCGATCCC CGTCTCCAGCTCGCCCCCCCTGCTGCCTCCTCCGGTGGCCGGGTCCAAGCCGCAGCTCCC CCCGTTCTCCTCCTCCTCCTCCGTGGCGTCGTCGTCGTCTCCGCCGCTCCCCTCCTCCGT CTCGGTCGCCATCGCCGGCGACGGGTTCGGCCCCCCGCCCAACACGCTCACCGAGCCCGT GTTGGACACCGTCAAGCGCGACCTCGCTCGCATCGTCAGCAACCTCAAGCTCGTCGTCTT CCCAAACCCTTTCCGTGAGGACCCCGGGAAGGCGCTGCGCGACTGGGATCTCTGGGGCCC TTTCTTCTTCATCGTCTTCCTCGGCCTCACCCTCTCCTGGTCAGCCTCCGTCAAGAAGTC TGAAGTGTTTGCTGTTGCTTTTGCTGTACTAGCTGCTGGTGCTATAATTCTCACATTGAA TGTGCTGCTCCTGGGTGGGCGCATCAACTTCTTTCAGAGCCTGAGTCTTCTTGGATACTG CCTGTTCCCTTTGGATGTCGGAGCTTTGATTTGCATGCTGAAGGATAATGTACTACTGAA GATCATTGCAGTAGTGGTTACATTGGCCTGGAGCTCCTGGGCAGCATATCCATTCATGAG TGCTGCTGTTAACCCAAGGAGAAAGGCGTTGGCACTATATCCTGTCTTCCTTATGTACGT CTCTGTTGGGTTCCTCATCATCGCAATAGATTAAGGGCGGAATAGTCGCTATGCTACTAA TCCTGAGTTTTGTTTCCCGTTTGAGCATCATAATTCATACAGAATTAGTTACACGTTCCT GTTGTCGTTGTTGCTGACTTTTAGTTCAGCTATGATTTTTTTTTCCTTTTCTATAAGCAG AAGTCGT