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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0436400-03
CDS Infomation

cds chromosome:IRGSP-1.0:5:21371320:21376448:1 gene:Os05g0436400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to signal peptide peptidase family protein. (Os05t0436400-01);Hypothetical gene. (Os05t0436400-02);Similar to signal peptide peptidase family protein. (Os05t0436400-03)
Sequence

GAACATGCTATGCGGTTTCCTTTGGTGGGAAGTGCTATGCTTTTGTCCCTCTTCCTTCTA
TTCAAGTTTCTCTCAAAAGATTTGGTCAATACTGTTCTCACTGCCTACTTTTTCATTCTT
GGCATCGCTGCTCTCTGTGCAACATTGCTGCCTTCCATAAAACGATTTCTTCCAAAAGAA
TGGAACGATAATGCCATTGTTTGGCGTGCTCCACTTTTCCACTCGCTCTCGGTGGAGTTT
ACCAGATCTCAAGTCGTTGCATCGATCCCAGGATTTTTCTTTTGCATATGGTATGCTGCG
AAGAAGCATTGGCTAGCAAACAACGTTCTGGGGATTTCTTTCTGCATTCAGGGAATCGAG
ATGCTATCACTTGGATCATTCAAAACTGGTGCTATTCTCTTGAGCGGACTCTTTTTCTAT
GATATTTTCTGGGTCTTCTTCACTCCAGTTATGGTCAGTGTTGCCAAGTCATTTGATGCT
CCAATAAAGCTTCTATTTCCTACAGGTGATGCTGCACGCCCGTTCTCTATGCTTGGCCTT
GGTGACATTGTAATACCTGGTATATTTGTGGCACTTGCGCTGCGTTTTGATGTCTCAAGA
GGAATTAAGAACCGCTATTTTAATAGTGCATTTTTGGGTTATACCGTGGGTCTGACTGTG
ACAATAATAGTGATGAACTGGTTCCAAGCTGCACAGCCTGCTCTGTTGTACATTGTTCCT
GGTGTGATTGGTTTTGTTGCTGTTCACTGTTTGTGGAATGGTGAAGTAAAGCCGCTCCTT
GAGTACAACGAGTCCAAAGCGGAAGAGGAGGAAGCTTGTGAAGAAGATACAGATAGCAAG
CAAAACAAAAAGAAAGAGTAG

Peptide Sequence

PEP ID

Os05t0436400-03
PEP Infomation

pep chromosome:IRGSP-1.0:5:21371320:21376448:1 gene:Os05g0436400 transcript:Os05t0436400-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to signal peptide peptidase family protein. (Os05t0436400-01);Hypothetical gene. (Os05t0436400-02);Similar to signal peptide peptidase family protein. (Os05t0436400-03)
Sequence

EHAMRFPLVGSAMLLSLFLLFKFLSKDLVNTVLTAYFFILGIAALCATLLPSIKRFLPKE
WNDNAIVWRAPLFHSLSVEFTRSQVVASIPGFFFCIWYAAKKHWLANNVLGISFCIQGIE
MLSLGSFKTGAILLSGLFFYDIFWVFFTPVMVSVAKSFDAPIKLLFPTGDAARPFSMLGL
GDIVIPGIFVALALRFDVSRGIKNRYFNSAFLGYTVGLTVTIIVMNWFQAAQPALLYIVP
GVIGFVAVHCLWNGEVKPLLEYNESKAEEEEACEEDTDSKQNKKKE

Transcript Sequence

Transcript ID

Os05t0436400-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:21371320:21376448:1 gene:Os05g0436400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to signal peptide peptidase family protein. (Os05t0436400-01);Hypothetical gene. (Os05t0436400-02);Similar to signal peptide peptidase family protein. (Os05t0436400-03)
Sequence

GAACATGCTATGCGGTTTCCTTTGGTGGGAAGTGCTATGCTTTTGTCCCTCTTCCTTCTA
TTCAAGTTTCTCTCAAAAGATTTGGTCAATACTGTTCTCACTGCCTACTTTTTCATTCTT
GGCATCGCTGCTCTCTGTGCAACATTGCTGCCTTCCATAAAACGATTTCTTCCAAAAGAA
TGGAACGATAATGCCATTGTTTGGCGTGCTCCACTTTTCCACTCGCTCTCGGTGGAGTTT
ACCAGATCTCAAGTCGTTGCATCGATCCCAGGATTTTTCTTTTGCATATGGTATGCTGCG
AAGAAGCATTGGCTAGCAAACAACGTTCTGGGGATTTCTTTCTGCATTCAGGGAATCGAG
ATGCTATCACTTGGATCATTCAAAACTGGTGCTATTCTCTTGAGCGGACTCTTTTTCTAT
GATATTTTCTGGGTCTTCTTCACTCCAGTTATGGTCAGTGTTGCCAAGTCATTTGATGCT
CCAATAAAGCTTCTATTTCCTACAGGTGATGCTGCACGCCCGTTCTCTATGCTTGGCCTT
GGTGACATTGTAATACCTGGTATATTTGTGGCACTTGCGCTGCGTTTTGATGTCTCAAGA
GGAATTAAGAACCGCTATTTTAATAGTGCATTTTTGGGTTATACCGTGGGTCTGACTGTG
ACAATAATAGTGATGAACTGGTTCCAAGCTGCACAGCCTGCTCTGTTGTACATTGTTCCT
GGTGTGATTGGTTTTGTTGCTGTTCACTGTTTGTGGAATGGTGAAGTAAAGCCGCTCCTT
GAGTACAACGAGTCCAAAGCGGAAGAGGAGGAAGCTTGTGAAGAAGATACAGATAGCAAG
CAAAACAAAAAGAAAGAGTAGGGCTCTAACAAGTAACAATCATACCTTGAGGACTAGAAT
ATTCAGAAACTTTATGTAAGGTCTTCGGCATCTAAGTAGGCTGGATGACCTTTGGGATAC
AAGCTCACTTAGAACTTAGAAATGATTCACATGATAGAATCTTTCTGGTTTTGAGAATTG
TTTGGTCTGGTGAGTAGATGAGGAATGCATCCTAAGTGGTTTAGC