Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0435300-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:21311523:21312499:1 gene:Os05g0435300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 domain containing protein. (Os05t0435300-00)
Sequence

ATGGAAACGGGAGTGTTCGTCGTGTCCGCCGTGGTAGGATTGTTCGCGGTGGCGAGCGCC
GTCCTGGGGTTCATCGCCGAGGAGAAAAAACTCACCCCCGAAGACATCGACGTGTCGAGC
GGCGAGTGCGAGTACCCGGCGAACGCCGCCTTCGTGCTGGGGATATGCGCGGTGCTCCTG
CTGGCGGTGGCACAGATCATCGTCTCCTCCGTCGCCGGCTGCTGCGGATGCTGCAGGCCT
CGTGCCGGCGCTTCCGAGTCCAGGCGTGTCACCGGCATTGTCTGCTCTGTCTTCTCATGG
ATCGCGGCGATCGTCGCGGGTGTGTCCTTCGTGCAAGGCGCGGCGTGGAACGCGCCGGTG
ACGCGCGACACGGCGCCGCTGTGCTACTACCTCAAGGACGGCGTCTTCAGGAGGGCGGCC
GTGCTGAGCCTCGCCGCCGCCGTGTTCGGGATCAAGTCCTACATCATGCTTCGCGTCGCC
GCGGCGGTCGAGCCTAAGCCCGACGGCCAGCAGCCGCAGCCGCAGCAGGCCCCCGCCGCA
CCGGTTGTGACGGGATATCCGCCGCAAGGATATGCGCCTAACCAGCAGTTCACTGCTGCG
GCTGATCAAGTATATGGGCCGAGCGCGCTGTACCCTCCTACCAAAGGTTATGGCCAAGTG
TAG

Peptide Sequence

PEP ID

Os05t0435300-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:21311523:21312499:1 gene:Os05g0435300 transcript:Os05t0435300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 domain containing protein. (Os05t0435300-00)
Sequence

METGVFVVSAVVGLFAVASAVLGFIAEEKKLTPEDIDVSSGECEYPANAAFVLGICAVLL
LAVAQIIVSSVAGCCGCCRPRAGASESRRVTGIVCSVFSWIAAIVAGVSFVQGAAWNAPV
TRDTAPLCYYLKDGVFRRAAVLSLAAAVFGIKSYIMLRVAAAVEPKPDGQQPQPQQAPAA
PVVTGYPPQGYAPNQQFTAAADQVYGPSALYPPTKGYGQV

Transcript Sequence

Transcript ID

Os05t0435300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:21311523:21312499:1 gene:Os05g0435300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 domain containing protein. (Os05t0435300-00)
Sequence

CGACAGGGAGAGACATAGGCATTTCAGCATTTGAAGAGAGATGGAAACGGGAGTGTTCGT
CGTGTCCGCCGTGGTAGGATTGTTCGCGGTGGCGAGCGCCGTCCTGGGGTTCATCGCCGA
GGAGAAAAAACTCACCCCCGAAGACATCGACGTGTCGAGCGGCGAGTGCGAGTACCCGGC
GAACGCCGCCTTCGTGCTGGGGATATGCGCGGTGCTCCTGCTGGCGGTGGCACAGATCAT
CGTCTCCTCCGTCGCCGGCTGCTGCGGATGCTGCAGGCCTCGTGCCGGCGCTTCCGAGTC
CAGGCGTGTCACCGGCATTGTCTGCTCTGTCTTCTCATGGATCGCGGCGATCGTCGCGGG
TGTGTCCTTCGTGCAAGGCGCGGCGTGGAACGCGCCGGTGACGCGCGACACGGCGCCGCT
GTGCTACTACCTCAAGGACGGCGTCTTCAGGAGGGCGGCCGTGCTGAGCCTCGCCGCCGC
CGTGTTCGGGATCAAGTCCTACATCATGCTTCGCGTCGCCGCGGCGGTCGAGCCTAAGCC
CGACGGCCAGCAGCCGCAGCCGCAGCAGGCCCCCGCCGCACCGGTTGTGACGGGATATCC
GCCGCAAGGATATGCGCCTAACCAGCAGTTCACTGCTGCGGCTGATCAAGTATATGGGCC
GAGCGCGCTGTACCCTCCTACCAAAGGTTATGGCCAAGTGTAG