Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0434800-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:21300430:21301218:1 gene:Os05g0434800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 domain containing protein. (Os05t0434800-00)
Sequence

ATGGCCGGGAAAATGGACAAGACGACGATCATCGTCTCCGCGGTTGTCGGGTCCCTGGGG
TTGCTGAGCGCCATCCTGGGGTTCTCCGCCGAGGGCACAAAGATCACTGTGACCGATATA
CTGGTCGGCGGCAAGTGCCTGTACCCGGAGAACCCCGCGACCGCGCTGGGGGTCTGCGCG
GCCGTCTTCCTGCTGTTAGCGCAGATCACCGTGTCGGCCGTCGGCGGCTGCTGCGGCTGC
TGCAAGTCCCGGTCCATCCCGTCGGAGACCAAGCGGATAATCGGCGTCATCTGCGCTGTC
ATGTCATGGTTAGTCACCGCCGATATCACCGCCGGTACGGTGTGGATAGCGGCGGGGATC
GCGTGGTTTCTGTTCGGGATGGGCGCGGTGGTGAACAACGACTGCTACGTCGTCAAGGAC
GGAATCTTTGCTGGCGCGGCCGTGCTGGCACTCGCTGCCACGGCTTCCGGGATCACGTCC
TACGTCATGCTCCGCAGGCAGGCCGACGAGGCGCCGGCCAAGCAGCCGCCGCTGGCCGGG
GTCGCGATGGGCCAACCGCAGTTCCCGCCGCCGCCAGATTCACAAGTATAG

Peptide Sequence

PEP ID

Os05t0434800-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:21300430:21301218:1 gene:Os05g0434800 transcript:Os05t0434800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 domain containing protein. (Os05t0434800-00)
Sequence

MAGKMDKTTIIVSAVVGSLGLLSAILGFSAEGTKITVTDILVGGKCLYPENPATALGVCA
AVFLLLAQITVSAVGGCCGCCKSRSIPSETKRIIGVICAVMSWLVTADITAGTVWIAAGI
AWFLFGMGAVVNNDCYVVKDGIFAGAAVLALAATASGITSYVMLRRQADEAPAKQPPLAG
VAMGQPQFPPPPDSQV

Transcript Sequence

Transcript ID

Os05t0434800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:21300430:21301218:1 gene:Os05g0434800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 domain containing protein. (Os05t0434800-00)
Sequence

GAAGACTTGGGAGAAGAATGGCCGGGAAAATGGACAAGACGACGATCATCGTCTCCGCGG
TTGTCGGGTCCCTGGGGTTGCTGAGCGCCATCCTGGGGTTCTCCGCCGAGGGCACAAAGA
TCACTGTGACCGATATACTGGTCGGCGGCAAGTGCCTGTACCCGGAGAACCCCGCGACCG
CGCTGGGGGTCTGCGCGGCCGTCTTCCTGCTGTTAGCGCAGATCACCGTGTCGGCCGTCG
GCGGCTGCTGCGGCTGCTGCAAGTCCCGGTCCATCCCGTCGGAGACCAAGCGGATAATCG
GCGTCATCTGCGCTGTCATGTCATGGTTAGTCACCGCCGATATCACCGCCGGTACGGTGT
GGATAGCGGCGGGGATCGCGTGGTTTCTGTTCGGGATGGGCGCGGTGGTGAACAACGACT
GCTACGTCGTCAAGGACGGAATCTTTGCTGGCGCGGCCGTGCTGGCACTCGCTGCCACGG
CTTCCGGGATCACGTCCTACGTCATGCTCCGCAGGCAGGCCGACGAGGCGCCGGCCAAGC
AGCCGCCGCTGGCCGGGGTCGCGATGGGCCAACCGCAGTTCCCGCCGCCGCCAGATTCAC
AAGTATAG