Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0433400-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:21240878:21241617:1 gene:Os05g0433400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 domain containing protein. (Os05t0433400-00)
Sequence

GCACATTGCCGATCTCTCTCCTGGCCCCTGAAGCGTACGTTCTTGCTTCATTGGAATGGA
TGCGCCGTGGCGCATATACGTGGCCAACAACTGACAGTTGAACGATCGATTTTGCAGATT
TCGGACGTGCGGGTTTCCGGCGACGAGTGCCTGTACCCGCAGAACCCCTCGCTAAGGCTG
GGGCTCTGCGCCGCCGTATTGCTGCTTCTGGCGCAGGTCACCGTGTCCGCCATCGGCGGC
TGCGGCTGCTGCTGCGGCAACGGCAAGCCCCGCGGCATCCCGTCCTCCAAGACCAACCGG
GTCGTCGGCATCGTCTTCGCCGTTGCCTCATGGATAGCGGCGGTGATCGCCGTAGTGCTG
TTCGTGGAGGGGGCGGCGTGGAACGCCAACGTGGCGAGGGACACCGCGCCGGTGTGCTAC
TTCCTCAAGGACGGCGTCTTCGCGGCCGCGGCCGTGCTGGCCCTCGCCGCCACGGCGCTC
GGTGTCGCCTCCTACGTCATGCTCCGCAGGCAGCTGCCCGACGACGACGACGACGCACCG
GCGGGCGCGGTCGCGTCCTGGAGGCAGCCGCTGCTGCACTCCGGGATCGCGATGGGCCAC
CCGCAGTTCCCGCCGCATCCTCAATGGCATTCGCAGGTTTAG

Peptide Sequence

PEP ID

Os05t0433400-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:21240878:21241617:1 gene:Os05g0433400 transcript:Os05t0433400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 domain containing protein. (Os05t0433400-00)
Sequence

AHCRSLSWPLKRTFLLHWNGCAVAHIRGQQLTVERSILQISDVRVSGDECLYPQNPSLRL
GLCAAVLLLLAQVTVSAIGGCGCCCGNGKPRGIPSSKTNRVVGIVFAVASWIAAVIAVVL
FVEGAAWNANVARDTAPVCYFLKDGVFAAAAVLALAATALGVASYVMLRRQLPDDDDDAP
AGAVASWRQPLLHSGIAMGHPQFPPHPQWHSQV

Transcript Sequence

Transcript ID

Os05t0433400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:21240878:21241617:1 gene:Os05g0433400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 domain containing protein. (Os05t0433400-00)
Sequence

GCACATTGCCGATCTCTCTCCTGGCCCCTGAAGCGTACGTTCTTGCTTCATTGGAATGGA
TGCGCCGTGGCGCATATACGTGGCCAACAACTGACAGTTGAACGATCGATTTTGCAGATT
TCGGACGTGCGGGTTTCCGGCGACGAGTGCCTGTACCCGCAGAACCCCTCGCTAAGGCTG
GGGCTCTGCGCCGCCGTATTGCTGCTTCTGGCGCAGGTCACCGTGTCCGCCATCGGCGGC
TGCGGCTGCTGCTGCGGCAACGGCAAGCCCCGCGGCATCCCGTCCTCCAAGACCAACCGG
GTCGTCGGCATCGTCTTCGCCGTTGCCTCATGGATAGCGGCGGTGATCGCCGTAGTGCTG
TTCGTGGAGGGGGCGGCGTGGAACGCCAACGTGGCGAGGGACACCGCGCCGGTGTGCTAC
TTCCTCAAGGACGGCGTCTTCGCGGCCGCGGCCGTGCTGGCCCTCGCCGCCACGGCGCTC
GGTGTCGCCTCCTACGTCATGCTCCGCAGGCAGCTGCCCGACGACGACGACGACGCACCG
GCGGGCGCGGTCGCGTCCTGGAGGCAGCCGCTGCTGCACTCCGGGATCGCGATGGGCCAC
CCGCAGTTCCCGCCGCATCCTCAATGGCATTCGCAGGTTTAG