Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0428600-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:21033769:21036041:-1 gene:Os05g0428600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ER chaperone BiP4, Binding protein 4, Mediator 37_5 description:Similar to HSP70 precursor. (Os05t0428600-01)
Sequence	ATGGCGCGGCCGCGGCGCGCTTCGACGGCAACGACAATGCAGCTGGGGCTTCTCCTCGCC GCGCTTCTCCTCTTCACGTCGTCGCTGGCCGGCTCTGTGGCGGCGGCCGCACCGCCGCCG CCGGCGGGGGCCAAGGGTGGTGGTGCCAAGAGCGGCGGCGGCGGCGGCACCGTGATCGGG ATCGACCTCGGCACGACGTACTCGTGCGTCGGCGTCTACCGGAACGACCGTGTCGAGATC ATCGCCAACGACCAGGGGAACCGGATCACGCCCTCGTGGGTCGCCTTCACCGACGGCGGC GAGCGGCTCATCGGCGAGGCAGCCAAGAACCAGGCGGCGGCCAACCCGGAGCGGACCATC TACGACGCCAAGCGGCTCATCGGCCGGCAGTTCTCCGACGCCGAGGTGCAGCGCGACATG AAGCTGCTGCCGTTCGCCGTCGTCGACCGGAACGGCAAGCCGCACGTGCGCGTCGAGGTG AAGGACGGCGACGTGCGCGTGTTCAGCCCGGAGGAGGTGAGCGCCATGGTGCTCACCCGG ATGAAGGAGACGGCCGAGGCCTACCTCGGCGAGAAGGTCACGCGCGCCGTCGTCACCGTC CCGGCCTACTTCAACGACGCGCAGCGGCAGGCCACCAAGGACGCCGGCGTCATCGCCGGG CTCACCGTCGACCGCATCATCAACGAGCCGACCGCCGCCGCCATCGCCTACGGCATCGAC AAGAAGGGCGCGGAGAAGAACGTCCTCGTCTTCGACCTCGGCGGCGGCACGTTCGACGTC AGCATCCTCGCCATCGACAACGGCGTGTTCGAGGTCCTTGCCACCAACGGCGACACCCAC CTCGGCGGCGAGGACTTCGACCAACGCCTCATGGACCACTTCGTCAAGGTCATCCGCCGG AAGCACGGGCGCGACATCGCCGGCGACGCGCGCGCGCTGGGCAAGCTCCGCCGCGAGTGC GAGCGCGCCAAGCGCGCGCTCAGCAACCAGCACCAGGTGCGCGTCGAGATCGAGTCCCTG TTCGACGGCGTCGACTTCTCGGAGCCGCTCTCCCGGGCGCGGTTCGAGGAGCTCAACGGC GACCTCTTCAAGAAGACGATGGTGCCGGTGAGGAAGGCCATGGCGGACGCCGGGCTGGGC AAGGGCGACATCGACGAGATCGTCCTCGTCGGCGGCAGCACCAGGATCCCCAAGGTGCAG CAGCTGCTCAAGGACTACTTCGGTGGCAAGGAGCCCAACCGCGGCGTCAACCCCGACGAG GCCGTGGCGTACGGCGCCGCCGTGCAGGCCAGCATCATCAGCGGCCACGTCGACGAGAAC ACGGAGAGCATGATCCTCCTCGACGTCGCGCCGCTCACCCTCGGCCTGGAGACGGCCGGC GGCGTGATGACCAAGCTGATCCCGCGCAACACGGTGGTGCCGACGAAGAAGACGCAGGTG TTCACCACGTACAAGGACAGGCAGACGACGGTGACCATCCAGGTGTTCGAGGGCGAGCGG AGCATGACGAGGGACAACCGGCTGCTCGGCAAGTTCGACCTCACCGGCATCGCGCCGGCG CCGAGGGGGGCGCCGCAGATCGCGGTGACGTTCGAGGTGGACGCCAACGGCATCCTCAGC GTGCTGGCCGCCGACAAGGCCACCGGCAGGTCGGAGAAGATCACCATCTCCGGCGACGAC CGCAAGATCAGCCAGGAGGAGATCGACCGGATGGTGCGCGAGGCGGAGGAGTTCGCCGAC GAGGACCGCCGGCACAGGGAGCAGGTGGACGCCCGGAACAGCCTGGAGGCGTACGTCTAC AACGTCAAGAGCACGCTCGGCGGCAAGATGGCGGACGCCATGGAGGGGGAGGAGAAGGAG AAGGTGGAGGAGGCGGTGAGGGAGGCGCACGAGTGGCTGGACGGCAACCCGGACGCCGGC AAGGAGGAGTACGAGGAGAAGCTGCGGGAGCTGGAGGACGTGTGCAACCCCGTCATGTCG GCGGTGTACCAGAGGTCCGGCGGCGGCGGCGGCGCACCGGAAGATGGCAACGTCGACGAC GAGGATGACCACGATGAGCTTTAG

Peptide Sequence

PEP ID	Os05t0428600-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:21033769:21036041:-1 gene:Os05g0428600 transcript:Os05t0428600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ER chaperone BiP4, Binding protein 4, Mediator 37_5 description:Similar to HSP70 precursor. (Os05t0428600-01)
Sequence	MARPRRASTATTMQLGLLLAALLLFTSSLAGSVAAAAPPPPAGAKGGGAKSGGGGGTVIG IDLGTTYSCVGVYRNDRVEIIANDQGNRITPSWVAFTDGGERLIGEAAKNQAAANPERTI YDAKRLIGRQFSDAEVQRDMKLLPFAVVDRNGKPHVRVEVKDGDVRVFSPEEVSAMVLTR MKETAEAYLGEKVTRAVVTVPAYFNDAQRQATKDAGVIAGLTVDRIINEPTAAAIAYGID KKGAEKNVLVFDLGGGTFDVSILAIDNGVFEVLATNGDTHLGGEDFDQRLMDHFVKVIRR KHGRDIAGDARALGKLRRECERAKRALSNQHQVRVEIESLFDGVDFSEPLSRARFEELNG DLFKKTMVPVRKAMADAGLGKGDIDEIVLVGGSTRIPKVQQLLKDYFGGKEPNRGVNPDE AVAYGAAVQASIISGHVDENTESMILLDVAPLTLGLETAGGVMTKLIPRNTVVPTKKTQV FTTYKDRQTTVTIQVFEGERSMTRDNRLLGKFDLTGIAPAPRGAPQIAVTFEVDANGILS VLAADKATGRSEKITISGDDRKISQEEIDRMVREAEEFADEDRRHREQVDARNSLEAYVY NVKSTLGGKMADAMEGEEKEKVEEAVREAHEWLDGNPDAGKEEYEEKLRELEDVCNPVMS AVYQRSGGGGGAPEDGNVDDEDDHDEL

Transcript Sequence

Transcript ID	Os05t0428600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:21033769:21036041:-1 gene:Os05g0428600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ER chaperone BiP4, Binding protein 4, Mediator 37_5 description:Similar to HSP70 precursor. (Os05t0428600-01)
Sequence	ATCGACACAAAACCAAAAGCGAAGACGACGATCATGGCGCGGCCGCGGCGCGCTTCGACG GCAACGACAATGCAGCTGGGGCTTCTCCTCGCCGCGCTTCTCCTCTTCACGTCGTCGCTG GCCGGCTCTGTGGCGGCGGCCGCACCGCCGCCGCCGGCGGGGGCCAAGGGTGGTGGTGCC AAGAGCGGCGGCGGCGGCGGCACCGTGATCGGGATCGACCTCGGCACGACGTACTCGTGC GTCGGCGTCTACCGGAACGACCGTGTCGAGATCATCGCCAACGACCAGGGGAACCGGATC ACGCCCTCGTGGGTCGCCTTCACCGACGGCGGCGAGCGGCTCATCGGCGAGGCAGCCAAG AACCAGGCGGCGGCCAACCCGGAGCGGACCATCTACGACGCCAAGCGGCTCATCGGCCGG CAGTTCTCCGACGCCGAGGTGCAGCGCGACATGAAGCTGCTGCCGTTCGCCGTCGTCGAC CGGAACGGCAAGCCGCACGTGCGCGTCGAGGTGAAGGACGGCGACGTGCGCGTGTTCAGC CCGGAGGAGGTGAGCGCCATGGTGCTCACCCGGATGAAGGAGACGGCCGAGGCCTACCTC GGCGAGAAGGTCACGCGCGCCGTCGTCACCGTCCCGGCCTACTTCAACGACGCGCAGCGG CAGGCCACCAAGGACGCCGGCGTCATCGCCGGGCTCACCGTCGACCGCATCATCAACGAG CCGACCGCCGCCGCCATCGCCTACGGCATCGACAAGAAGGGCGCGGAGAAGAACGTCCTC GTCTTCGACCTCGGCGGCGGCACGTTCGACGTCAGCATCCTCGCCATCGACAACGGCGTG TTCGAGGTCCTTGCCACCAACGGCGACACCCACCTCGGCGGCGAGGACTTCGACCAACGC CTCATGGACCACTTCGTCAAGGTCATCCGCCGGAAGCACGGGCGCGACATCGCCGGCGAC GCGCGCGCGCTGGGCAAGCTCCGCCGCGAGTGCGAGCGCGCCAAGCGCGCGCTCAGCAAC CAGCACCAGGTGCGCGTCGAGATCGAGTCCCTGTTCGACGGCGTCGACTTCTCGGAGCCG CTCTCCCGGGCGCGGTTCGAGGAGCTCAACGGCGACCTCTTCAAGAAGACGATGGTGCCG GTGAGGAAGGCCATGGCGGACGCCGGGCTGGGCAAGGGCGACATCGACGAGATCGTCCTC GTCGGCGGCAGCACCAGGATCCCCAAGGTGCAGCAGCTGCTCAAGGACTACTTCGGTGGC AAGGAGCCCAACCGCGGCGTCAACCCCGACGAGGCCGTGGCGTACGGCGCCGCCGTGCAG GCCAGCATCATCAGCGGCCACGTCGACGAGAACACGGAGAGCATGATCCTCCTCGACGTC GCGCCGCTCACCCTCGGCCTGGAGACGGCCGGCGGCGTGATGACCAAGCTGATCCCGCGC AACACGGTGGTGCCGACGAAGAAGACGCAGGTGTTCACCACGTACAAGGACAGGCAGACG ACGGTGACCATCCAGGTGTTCGAGGGCGAGCGGAGCATGACGAGGGACAACCGGCTGCTC GGCAAGTTCGACCTCACCGGCATCGCGCCGGCGCCGAGGGGGGCGCCGCAGATCGCGGTG ACGTTCGAGGTGGACGCCAACGGCATCCTCAGCGTGCTGGCCGCCGACAAGGCCACCGGC AGGTCGGAGAAGATCACCATCTCCGGCGACGACCGCAAGATCAGCCAGGAGGAGATCGAC CGGATGGTGCGCGAGGCGGAGGAGTTCGCCGACGAGGACCGCCGGCACAGGGAGCAGGTG GACGCCCGGAACAGCCTGGAGGCGTACGTCTACAACGTCAAGAGCACGCTCGGCGGCAAG ATGGCGGACGCCATGGAGGGGGAGGAGAAGGAGAAGGTGGAGGAGGCGGTGAGGGAGGCG CACGAGTGGCTGGACGGCAACCCGGACGCCGGCAAGGAGGAGTACGAGGAGAAGCTGCGG GAGCTGGAGGACGTGTGCAACCCCGTCATGTCGGCGGTGTACCAGAGGTCCGGCGGCGGC GGCGGCGCACCGGAAGATGGCAACGTCGACGACGAGGATGACCACGATGAGCTTTAGTTT AGTCCGGCTGGCGGCTGCTAAGCTAGCTAGCTCCTGTTTCACTAACTATCTAGAGTTCCT TTTTTTTTTCATTGCCGTATAAAATAATTTTACTAGGCAAACAATTATATTGCAAATATA TTAGTATTTTTGTATTACATTCATAGTTTGGATTCGATCGAAAGTGTGTTTTC