Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0428400-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:21006679:21009677:-1 gene:Os05g0428400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rossmann-like alpha/beta/alpha sandwich fold domain containing protein. (Os05t0428400-00)
Sequence

ATGGGGAGCAGCGGTGGCAGCAGCGAGCACTTCCTGCGCCAGTTCAGCGCGAGCGACGGC
GCACCGCTGCCGCGTGAGCTGGGCGAGGAGTGGGCGGCGGCCGAGTGCGGCAGGAGGGGG
TCGAGGCGGTGGTCCAGGAAGAAGGCGAGGGGGCACCACCGCCGCGGCGGGGGCGGAGGC
GGCGGCGGCGGGCTCTGCAGGAGCAGGGAGGAGGCCCCCGCGGGGAGGAAGCGGGTGATG
GTGGTGGTGGACCAGAGCTCCGGTGCCAAGCACGCCATGATGTGGGCGCTCACCCACGTC
GCCAGCAAGGGGGACTTCCTCACCCTGCTCCACGTCCTCCCCCACGGCGGCGGCGACGCC
TCCGCGCTCGCCAACTCCCTCGGCTCACTCTGCAAGGCCTGCAAGCCCGAGGTGGAGGTT
GAGGCGCTTGTGATCCAAGGGCCCAAGCTGGGCACCGTCCTCAGCCAGGTGAAGAAGCTG
GATGCATCTGTGCTGGTGCTGAGCCAATGCAAGCCATCTCCTTTCTGCTGCTTCATGAGG
AGCAGCGGCGAGGAGTTCGTGGAGGAGTGCATCAACAGGGCGGACTGCCTGACGCTGGCG
GTGAGGCGGCAGAGCAAGGGCGTCGGCGGCTACCTCATCAGCACCCGGTGGCAGAAGAAC
TTCTGGCTGCTGGCTTGA

Peptide Sequence

PEP ID

Os05t0428400-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:21006679:21009677:-1 gene:Os05g0428400 transcript:Os05t0428400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rossmann-like alpha/beta/alpha sandwich fold domain containing protein. (Os05t0428400-00)
Sequence

MGSSGGSSEHFLRQFSASDGAPLPRELGEEWAAAECGRRGSRRWSRKKARGHHRRGGGGG
GGGGLCRSREEAPAGRKRVMVVVDQSSGAKHAMMWALTHVASKGDFLTLLHVLPHGGGDA
SALANSLGSLCKACKPEVEVEALVIQGPKLGTVLSQVKKLDASVLVLSQCKPSPFCCFMR
SSGEEFVEECINRADCLTLAVRRQSKGVGGYLISTRWQKNFWLLA

Transcript Sequence

Transcript ID

Os05t0428400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:21006679:21009677:-1 gene:Os05g0428400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rossmann-like alpha/beta/alpha sandwich fold domain containing protein. (Os05t0428400-00)
Sequence

GAGCGCGGCAGCGGCAGCGGCTAGCAGCAAGCACCGCGACGCGACGCGCCGAGCAGTGCA
CCACGCCACTGGATCGAGAGGAGGGGGAGGAGATCGCCGATGGGGAGCAGCGGTGGCAGC
AGCGAGCACTTCCTGCGCCAGTTCAGCGCGAGCGACGGCGCACCGCTGCCGCGTGAGCTG
GGCGAGGAGTGGGCGGCGGCCGAGTGCGGCAGGAGGGGGTCGAGGCGGTGGTCCAGGAAG
AAGGCGAGGGGGCACCACCGCCGCGGCGGGGGCGGAGGCGGCGGCGGCGGGCTCTGCAGG
AGCAGGGAGGAGGCCCCCGCGGGGAGGAAGCGGGTGATGGTGGTGGTGGACCAGAGCTCC
GGTGCCAAGCACGCCATGATGTGGGCGCTCACCCACGTCGCCAGCAAGGGGGACTTCCTC
ACCCTGCTCCACGTCCTCCCCCACGGCGGCGGCGACGCCTCCGCGCTCGCCAACTCCCTC
GGCTCACTCTGCAAGGCCTGCAAGCCCGAGGTGGAGGTTGAGGCGCTTGTGATCCAAGGG
CCCAAGCTGGGCACCGTCCTCAGCCAGGTGAAGAAGCTGGATGCATCTGTGCTGGTGCTG
AGCCAATGCAAGCCATCTCCTTTCTGCTGCTTCATGAGGAGCAGCGGCGAGGAGTTCGTG
GAGGAGTGCATCAACAGGGCGGACTGCCTGACGCTGGCGGTGAGGCGGCAGAGCAAGGGC
GTCGGCGGCTACCTCATCAGCACCCGGTGGCAGAAGAACTTCTGGCTGCTGGCTTGACAA
ATTTTTACTGCCAAAGGCGAGCTTCTCTCCTACTTCTACAAGAAGAGATCAATAAGTTCA
GTGACTAGTAACTACACCAATAACTTGATCCCCAAAGCCCATGTGTGCTGTCTGTGTGTA
TGTATGTGTGCATATGCATGTGTGTTTGACAGTGTGATGGTGTGTTGTGTGTGTTCTTTG
ATTCTATCCCTCTTTGGTTAGCTGTAGCCTCTCACTTTGCTGTTGTAAAGAAGCCAAAAA
AGCTGACCCCGCTCTCCCTGTAATCCTGTGCTGTTCTCTGCGTGTCTGCTTGTTTGTTTG
AGCAGGGACGGTATGGTGCATAAAGTAGTAAGCACTCTACAATTTGTATTAT