Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0427200-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:20945128:20946958:-1 gene:Os05g0427200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-1,3-galactosyltransferase sqv-2. (Os05t0427200-01);Similar to beta-1,3-galactosyltransferase sqv-2. (Os05t0427200-02)
Sequence	GCACTGACGGAGCGGCAGCCGCAGTCGGAGAAGAAGGCGGCGAGGGCGAGGCCGATGTCG GCGAAGGCCGTCGTCGTGCTCTGCGCCACGAGCTTCTTCGTCGGCCTGCTGCTCAGCGGC CGGATGACGCTTCTGATGCCACCGCCGTCGGGCAGCGTCGGCGCGGCCTCCTCCGGCCAT GGCTCCAGGCTCTCCCTCTTCTCCGACGACTGCGAGCACCGGCATAAACTGGACGAGGGC AACCCGAACGACATCATGAACGAGGTGTCAAGAACTCACCAAGCAATCCAGTCGTTGGAC AAGTCGGTGTCGTCGCTGGAGATGGAGCTGGCGGTGGAGCGCGCGAAGCAGAACGGCGGG CTGGGCGCGGCGGTGCCGTCGAAGCGGGGGCGGCGGCCGCCCAGGGCGTTCGTGGTGATC GGCATCAACACGGCGTTCAGCAGCAAGAAGCGGCGCGACTCGCTCCGGGACACGTGGGTG CCGAGGGGCGAGAGGCTGCGGCGGCTGGAGGAGAAGGGGGTGGTGGTGCGGTTCGTGATC GGGCACAGCGCCACCCCGGGCGGCGCCCTAGACCGCGCCATCGACGTGGAGGACGCCGAG ACGCGGGACTTCATGCGGCTCGACCACGTCGAGGGCTACCACGAGCTCTCCTCCAAGACC CGCACCTACTTCACCGCCGCCGTCGCCACCTGGGACGCCGACTTCTACGTCAAGGTCGAC GACGACGTCCACGTCAACCTAGGGATGCTGACGAGCAGGCTGGCGAGGTACAGGACGAGG CCGAGGGTGTACGTGGGCTGCATGAAGTCCGGCCCGGTTCTGTCACAGAAGGGCGTGAAG TACCACGAGCCGGAGTACTGGAAGTTCGGGGACGAGGGGAACCGGTACTTCCGGCATGCC ACCGGCCAGATCTACGCCATCTCCAAGGACCTCGCCTCCTACATCTCCATCAACCAGCCG ATACTGCACCGGTTCGCGAACGAGGACGTGTCGCTGGGGGCGTGGCTGATAGGGCTGGAG GTGGAGCACGTGGACGACCGGAGCCTGTGCTGCGCGACGCCGCCGGACTGCGAGTGGAAG AAGCAGGCGGGGAACGTGTGCGCGGCGTCCTTCGACTGGTCCTGCAGCGGCATCTGCAAG TCCGTCGACAGGATGAGGGCCATCCACAGCGCCTGCGGCGAGGGCGACGGCGCCGTCTCG AACAACTTCGCCGCCGCCGCCGCCGCATGA

Peptide Sequence

PEP ID	Os05t0427200-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:20945128:20946958:-1 gene:Os05g0427200 transcript:Os05t0427200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-1,3-galactosyltransferase sqv-2. (Os05t0427200-01);Similar to beta-1,3-galactosyltransferase sqv-2. (Os05t0427200-02)
Sequence	ALTERQPQSEKKAARARPMSAKAVVVLCATSFFVGLLLSGRMTLLMPPPSGSVGAASSGH GSRLSLFSDDCEHRHKLDEGNPNDIMNEVSRTHQAIQSLDKSVSSLEMELAVERAKQNGG LGAAVPSKRGRRPPRAFVVIGINTAFSSKKRRDSLRDTWVPRGERLRRLEEKGVVVRFVI GHSATPGGALDRAIDVEDAETRDFMRLDHVEGYHELSSKTRTYFTAAVATWDADFYVKVD DDVHVNLGMLTSRLARYRTRPRVYVGCMKSGPVLSQKGVKYHEPEYWKFGDEGNRYFRHA TGQIYAISKDLASYISINQPILHRFANEDVSLGAWLIGLEVEHVDDRSLCCATPPDCEWK KQAGNVCAASFDWSCSGICKSVDRMRAIHSACGEGDGAVSNNFAAAAAA

Transcript Sequence

Transcript ID	Os05t0427200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:20945128:20946958:-1 gene:Os05g0427200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-1,3-galactosyltransferase sqv-2. (Os05t0427200-01);Similar to beta-1,3-galactosyltransferase sqv-2. (Os05t0427200-02)
Sequence	GGCACTGACGGAGCGGCAGCCGCAGTCGGAGAAGAAGGCGGCGAGGGCGAGGCCGATGTC GGCGAAGGCCGTCGTCGTGCTCTGCGCCACGAGCTTCTTCGTCGGCCTGCTGCTCAGCGG CCGGATGACGCTTCTGATGCCACCGCCGTCGGGCAGCGTCGGCGCGGCCTCCTCCGGCCA TGGCTCCAGGCTCTCCCTCTTCTCCGACGACTGCGAGCACCGGCATAAACTGGACGAGGG CAACCCGAACGACATCATGAACGAGGTGTCAAGAACTCACCAAGCAATCCAGTCGTTGGA CAAGTCGGTGTCGTCGCTGGAGATGGAGCTGGCGGTGGAGCGCGCGAAGCAGAACGGCGG GCTGGGCGCGGCGGTGCCGTCGAAGCGGGGGCGGCGGCCGCCCAGGGCGTTCGTGGTGAT CGGCATCAACACGGCGTTCAGCAGCAAGAAGCGGCGCGACTCGCTCCGGGACACGTGGGT GCCGAGGGGCGAGAGGCTGCGGCGGCTGGAGGAGAAGGGGGTGGTGGTGCGGTTCGTGAT CGGGCACAGCGCCACCCCGGGCGGCGCCCTAGACCGCGCCATCGACGTGGAGGACGCCGA GACGCGGGACTTCATGCGGCTCGACCACGTCGAGGGCTACCACGAGCTCTCCTCCAAGAC CCGCACCTACTTCACCGCCGCCGTCGCCACCTGGGACGCCGACTTCTACGTCAAGGTCGA CGACGACGTCCACGTCAACCTAGGGATGCTGACGAGCAGGCTGGCGAGGTACAGGACGAG GCCGAGGGTGTACGTGGGCTGCATGAAGTCCGGCCCGGTTCTGTCACAGAAGGGCGTGAA GTACCACGAGCCGGAGTACTGGAAGTTCGGGGACGAGGGGAACCGGTACTTCCGGCATGC CACCGGCCAGATCTACGCCATCTCCAAGGACCTCGCCTCCTACATCTCCATCAACCAGCC GATACTGCACCGGTTCGCGAACGAGGACGTGTCGCTGGGGGCGTGGCTGATAGGGCTGGA GGTGGAGCACGTGGACGACCGGAGCCTGTGCTGCGCGACGCCGCCGGACTGCGAGTGGAA GAAGCAGGCGGGGAACGTGTGCGCGGCGTCCTTCGACTGGTCCTGCAGCGGCATCTGCAA GTCCGTCGACAGGATGAGGGCCATCCACAGCGCCTGCGGCGAGGGCGACGGCGCCGTCTC GAACAACTTCGCCGCCGCCGCCGCCGCATGATCGATCGATGTGTACTGCAATACGTACGT ACACACACGCTAGCAGCTAGCCACAAGGAAGAGCAGCTATCTTACGGGGTTCCCCCCCTA ATTTATCCTTGTTTTGTTTTGTGGGTCTCATAATTAGAAATGGACTAATTATTCACTTGG TTTAT