Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0424700-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:20804018:20804890:1 gene:Os05g0424700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COPPER TRANSPORTER 5 description:Similar to Copper transporter 1. (Os05t0424700-01)
Sequence	ATGGACATGGGCGGCAATGGCATGGCGATGCCGCCGCCGCCGGCGCCGGTGAAGAAGGCG CGGTACATGCACATGACCTTCTTCTGGGGCAAGAACACGGAGGTGCTCTTCACCCTGTGG CCGGGCGCCAGGGGCGGCATGTACGCGCTCGCGATCCTCTTCATGTTCGCGCTGGCCGTG CTCCTCGAGTTCCGCGGCTACCGCGTGCTGGAGGCGCGCCTCGCCCGGCGGCGCGCGCCG CGGGCGGCCGCGGCGCTGCGCACGGCCGTCCACGCCGTGCGCGTCGGCGTCGCATACCTC ATCATGCTCGCGCTCATGTCGTTCAACGGCGGGGTGTTCCTCGCGATCGTGGCGGGGCAC GCCGCCGGCTTCCTGGCGTTCCGCGCCGGCCTGTGCGGCGGCGGGCCGGCGCCGCCGCTG GAGGAGGACCGCAAGAACGACCCCGTGTGCTGCTAG

Peptide Sequence

PEP ID	Os05t0424700-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:20804018:20804890:1 gene:Os05g0424700 transcript:Os05t0424700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COPPER TRANSPORTER 5 description:Similar to Copper transporter 1. (Os05t0424700-01)
Sequence	MDMGGNGMAMPPPPAPVKKARYMHMTFFWGKNTEVLFTLWPGARGGMYALAILFMFALAV LLEFRGYRVLEARLARRRAPRAAAALRTAVHAVRVGVAYLIMLALMSFNGGVFLAIVAGH AAGFLAFRAGLCGGGPAPPLEEDRKNDPVCC

Transcript Sequence

Transcript ID	Os05t0424700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:20804018:20804890:1 gene:Os05g0424700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COPPER TRANSPORTER 5 description:Similar to Copper transporter 1. (Os05t0424700-01)
Sequence	AAGAGCTAACCCATAGAGAGCAACATCGACATAAACTATCATCAGCTAGCTGCGACAGCG AGCTAGTAGAAGCCATGGACATGGGCGGCAATGGCATGGCGATGCCGCCGCCGCCGGCGC CGGTGAAGAAGGCGCGGTACATGCACATGACCTTCTTCTGGGGCAAGAACACGGAGGTGC TCTTCACCCTGTGGCCGGGCGCCAGGGGCGGCATGTACGCGCTCGCGATCCTCTTCATGT TCGCGCTGGCCGTGCTCCTCGAGTTCCGCGGCTACCGCGTGCTGGAGGCGCGCCTCGCCC GGCGGCGCGCGCCGCGGGCGGCCGCGGCGCTGCGCACGGCCGTCCACGCCGTGCGCGTCG GCGTCGCATACCTCATCATGCTCGCGCTCATGTCGTTCAACGGCGGGGTGTTCCTCGCGA TCGTGGCGGGGCACGCCGCCGGCTTCCTGGCGTTCCGCGCCGGCCTGTGCGGCGGCGGGC CGGCGCCGCCGCTGGAGGAGGACCGCAAGAACGACCCCGTGTGCTGCTAGTATGGCTTAA GCTGTCTCGCTCGTCATGGTGTTCACGTGGCCTTTTCGCTTAATTTGTTGATGTTTTGTG TGTGTGCATATAGGTTTCAGGTGATTGAAATCTTTGAAATTTGGGTCGGATGATCGAGTT TGTTTGGTTGTTTTGTTTTTCTCTCGTAAGGTCTACAGATGTGACATGAAAGTTAATTTC TTGATGTCATCTTGGCTTGGAATCTATTACTAGTGGTGTCTGTCAAACTGTAATTGTATA GCATATGTCACTCATTTGATTGATGCTGCCTCCCGGCTTTAGTTTCAATTGTCTCAGATT GGTTATTATAGTGTACCTGCAAAACTGTTCTTC