Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0424000-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:20779075:20781283:1 gene:Os05g0424000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:amino acid permease 11F, amino acid permease 7, amino acid/auxin permease 7 description:Amino acid permease, Transport of amino acids (Os05t0424000-01)
Sequence

ATGGGGGAGAACGGTGTGGTGGCGAGCAAGCTGTGCTACCCGGCGGCGGCCATGGAGGTG
GTCGCCGCCGAGCTCGGCCACACGGCCGGCTCCAAGCTGTACGACGACGACGGCCGCCTC
AAGCGCACCGGGACGATGTGGACGGCGAGCGCGCACATCATCACGGCGGTGATCGGCTCC
GGCGTGCTGTCGCTGGGGTGGGCGATCGCGCAGCTGGGTTGGGTGGCCGGCCCCGCCGTC
ATGCTGCTCTTCTCGTTCGTCACCTACTACACCTCCGCGCTGCTCGCCGACTGCTACCGC
TCCGGCGACGAGAGCACCGGCAAGCGCAACTACACCTACATGGACGCCGTGAACGCCAAC
CTGAGTGGCATCAAGGTCCAGGTCTGCGGGTTCCTGCAGTACGCCAACATCGTCGGCGTC
GCCATCGGCTACACCATTGCCGCCTCCATTAGCATGCTGGCGATCAAGCGGGCGAACTGC
TTCCACGTCGAGGGGCACGGCGACCCGTGCAACATCTCGAGCACGCCGTACATGATCATC
TTCGGCGTGGCGGAGATCTTCTTCTCGCAGATCCCGGACTTCGACCAGATCTCGTGGCTG
TCCATCCTCGCCGCCGTCATGTCGTTCACCTACTCCACCATCGGGCTCGGCCTCGGCGTC
GTGCAGGTGGTGGCCAACGGCGGCGTCAAGGGGAGCCTCACCGGGATCAGCATCGGCGTG
GTGACGCCCATGGACAAGGTGTGGCGGAGCCTGCAGGCGTTCGGCGACATCGCCTTCGCC
TACTCCTACTCCCTCATCCTCATCGAGATCCAGGACACCATCCGGGCGCCGCCGCCGTCG
GAGTCGAGGGTGATGCGGCGCGCCACCGTGGTGAGCGTCGCCGTCACCACGCTCTTCTAC
ATGCTCTGCGGCTGCACGGGGTACGCGGCGTTCGGCGACGCCGCGCCGGGCAACCTCCTC
ACCGGGTTCGGCTTCTACGAGCCCTTCTGGCTCCTCGACGTTGCCAACGCCGCCATCGTC
GTCCACCTCGTCGGCGCCTACCAGGTCTACTGCCAGCCGCTGTTCGCCTTCGTCGAGAAG
TGGGCGCAGCAGCGGTGGCCGAAATCATGGTACATCACCAAGGATATCGACGTGCCGCTC
TCCCTCTCCGGCGGCGGCGGCGGCGGCGGAAGGTGCTACAAGCTGAACCTGTTCAGGCTG
ACATGGAGGTCGGCGTTCGTGGTGGCGACGACGGTGGTGTCGATGCTGCTGCCGTTCTTC
AACGACGTGGTGGGGTTCCTCGGCGCGGTGGGGTTCTGGCCGCTCACCGTCTACTTCCCG
GTGGAGATGTACATCGTGCAGAAGAGGATACCGAGGTGGAGCACGCGGTGGGTGTGCCTG
CAGCTGCTCAGCCTCGCCTGCCTCGCCATCACCGTCGCCTCCGCCGCCGGCTCCATCGCC
GGAATCCTCTCCGACCTCAAGGTCTACAAGCCGTTCGCCACCACCTACTAA

Peptide Sequence

PEP ID

Os05t0424000-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:20779075:20781283:1 gene:Os05g0424000 transcript:Os05t0424000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:amino acid permease 11F, amino acid permease 7, amino acid/auxin permease 7 description:Amino acid permease, Transport of amino acids (Os05t0424000-01)
Sequence

MGENGVVASKLCYPAAAMEVVAAELGHTAGSKLYDDDGRLKRTGTMWTASAHIITAVIGS
GVLSLGWAIAQLGWVAGPAVMLLFSFVTYYTSALLADCYRSGDESTGKRNYTYMDAVNAN
LSGIKVQVCGFLQYANIVGVAIGYTIAASISMLAIKRANCFHVEGHGDPCNISSTPYMII
FGVAEIFFSQIPDFDQISWLSILAAVMSFTYSTIGLGLGVVQVVANGGVKGSLTGISIGV
VTPMDKVWRSLQAFGDIAFAYSYSLILIEIQDTIRAPPPSESRVMRRATVVSVAVTTLFY
MLCGCTGYAAFGDAAPGNLLTGFGFYEPFWLLDVANAAIVVHLVGAYQVYCQPLFAFVEK
WAQQRWPKSWYITKDIDVPLSLSGGGGGGGRCYKLNLFRLTWRSAFVVATTVVSMLLPFF
NDVVGFLGAVGFWPLTVYFPVEMYIVQKRIPRWSTRWVCLQLLSLACLAITVASAAGSIA
GILSDLKVYKPFATTY

Transcript Sequence

Transcript ID

Os05t0424000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:20779075:20781283:1 gene:Os05g0424000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:amino acid permease 11F, amino acid permease 7, amino acid/auxin permease 7 description:Amino acid permease, Transport of amino acids (Os05t0424000-01)
Sequence

CACGCACAGTCTCTCCCACCAACAAACACGTACGACTTTGAACGCAAAGTCTTGGCGCCA
CTCGATCGATCACTCTCTGCTCATCAGGTGTTTGTGGAAAGTGCAGAGATGGGGGAGAAC
GGTGTGGTGGCGAGCAAGCTGTGCTACCCGGCGGCGGCCATGGAGGTGGTCGCCGCCGAG
CTCGGCCACACGGCCGGCTCCAAGCTGTACGACGACGACGGCCGCCTCAAGCGCACCGGG
ACGATGTGGACGGCGAGCGCGCACATCATCACGGCGGTGATCGGCTCCGGCGTGCTGTCG
CTGGGGTGGGCGATCGCGCAGCTGGGTTGGGTGGCCGGCCCCGCCGTCATGCTGCTCTTC
TCGTTCGTCACCTACTACACCTCCGCGCTGCTCGCCGACTGCTACCGCTCCGGCGACGAG
AGCACCGGCAAGCGCAACTACACCTACATGGACGCCGTGAACGCCAACCTGAGTGGCATC
AAGGTCCAGGTCTGCGGGTTCCTGCAGTACGCCAACATCGTCGGCGTCGCCATCGGCTAC
ACCATTGCCGCCTCCATTAGCATGCTGGCGATCAAGCGGGCGAACTGCTTCCACGTCGAG
GGGCACGGCGACCCGTGCAACATCTCGAGCACGCCGTACATGATCATCTTCGGCGTGGCG
GAGATCTTCTTCTCGCAGATCCCGGACTTCGACCAGATCTCGTGGCTGTCCATCCTCGCC
GCCGTCATGTCGTTCACCTACTCCACCATCGGGCTCGGCCTCGGCGTCGTGCAGGTGGTG
GCCAACGGCGGCGTCAAGGGGAGCCTCACCGGGATCAGCATCGGCGTGGTGACGCCCATG
GACAAGGTGTGGCGGAGCCTGCAGGCGTTCGGCGACATCGCCTTCGCCTACTCCTACTCC
CTCATCCTCATCGAGATCCAGGACACCATCCGGGCGCCGCCGCCGTCGGAGTCGAGGGTG
ATGCGGCGCGCCACCGTGGTGAGCGTCGCCGTCACCACGCTCTTCTACATGCTCTGCGGC
TGCACGGGGTACGCGGCGTTCGGCGACGCCGCGCCGGGCAACCTCCTCACCGGGTTCGGC
TTCTACGAGCCCTTCTGGCTCCTCGACGTTGCCAACGCCGCCATCGTCGTCCACCTCGTC
GGCGCCTACCAGGTCTACTGCCAGCCGCTGTTCGCCTTCGTCGAGAAGTGGGCGCAGCAG
CGGTGGCCGAAATCATGGTACATCACCAAGGATATCGACGTGCCGCTCTCCCTCTCCGGC
GGCGGCGGCGGCGGCGGAAGGTGCTACAAGCTGAACCTGTTCAGGCTGACATGGAGGTCG
GCGTTCGTGGTGGCGACGACGGTGGTGTCGATGCTGCTGCCGTTCTTCAACGACGTGGTG
GGGTTCCTCGGCGCGGTGGGGTTCTGGCCGCTCACCGTCTACTTCCCGGTGGAGATGTAC
ATCGTGCAGAAGAGGATACCGAGGTGGAGCACGCGGTGGGTGTGCCTGCAGCTGCTCAGC
CTCGCCTGCCTCGCCATCACCGTCGCCTCCGCCGCCGGCTCCATCGCCGGAATCCTCTCC
GACCTCAAGGTCTACAAGCCGTTCGCCACCACCTACTAATTCATCGAGCACCTCGCGTGC
ATGCACATACCGTACGTTATTACGCGTGGTCGAGATGAAGTACAGATGATTGTATCCTAA
TTAATCAATTAATCAACCAAAATTAATTAACTAATTACTATTTAGTTATTATTGTCACAC
GTGTGGTGAAAAAAAAAGTGAAAAGAGGAATTTGAGACAGGTTGCATAGAGTGTTGTTTA
TGCTATTGTTGCTTGTATACTGCCTGTATTAATTCCAACCGATGCTACTAATTTTGATTG
TTTCTGGTCCGTGTTAATGTTAACCAAAAGGAGGTAGAATGGTGTATTTCCAAGTGAAGA
GATGTGTTTGTAATTACATAATTAAATGAGAAATGCACTTTCTTATGGC