Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0420200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:20595690:20598798:1 gene:Os05g0420200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF179 family protein. (Os05t0420200-01)
Sequence	ATGTGGGCCCTCAACCTGAAGGCGGGCGGCGGGGGGCCCTGCCTCACGCCGAGGCGGCGC CCCCTCGCCGCCGGCGAGGCCGCCCCGTGCTCCGTGGCGGCGGCGTGGGCGGGGAGGAGG GTCGGGGGGAGGCGCGGCATGGCGCTGGTGGCGGTGGGCGCGTCGGGGAGGAGGGGCAAG GACGGCCCAGGCGGCGGCGATGGCGGGGACGATGAGGCCAAGAGCAAGGCCTCGTCTTCT TCCGGAAATGACGATGCGGCCTCCACAGGTGACAGCTCTGATGGATTGAACCAACTGCAT AACGAATCCAAATCCAATATCTCTAACAGCAATTACTGGAGAGATGTCAGAGCAAACCTT GTGCGCCGGGAGCAGGAGCTCTTGGTAGATCCAAGTGCACCCGCAGAGCAGAAAACATCA TCAGGAGAACCAGCACACCAGCTTCCTCAAAAGTGGGCTCACCCTATTACAATGCCAGAA GCAGGGTGTGTCTTGGTTGCTACCGAAGTGCTTGACGATGATAGCATCTTCGAAAGAACT GTCATTCTCCTCCTTAGACTAGGTTCCAGAGGCACATTTGATAGCCCGTTTGGAGTCATC CTGAACCGTCCACTCTACACAAAGATCAAGAATGTGAATCCATCATTCCAGGACCAGGCA ACTCCGTTCGGTGACTCCCCCCTCTTCTTCGGAGGCCCTGTCGACATGAGCATGTTCCTG GTGAGGGCCAGTGACAACTCTCGTCTCAAGGGGTTCGAGGAGGTCATACCAGGCATTCGC TTTGGCTTCCGGACCGACCTAGAGAAGGCTGCTGTTCTGATGAAGAGTGGGGCAATTAAG AGCCAGGACCTGAGGTTCTTCGTCGGGCACGCTGCGTGGGATTACGAGCAGCTGTTGAGC GAGATCAGGGCAGGATACTGGGCCGTCGCCTCCTGCAGCACGGAGCTGATCAGCGATGCA CTGACAGGCGATCCTTCTTGTCTCTGGACCGAGATATTGCAGCTGATGGGAGGGCATTAC TCGGAGCTCAGCCAGAAACCAAAGGAAGACAACCAGTAG

Peptide Sequence

PEP ID	Os05t0420200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:20595690:20598798:1 gene:Os05g0420200 transcript:Os05t0420200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF179 family protein. (Os05t0420200-01)
Sequence	MWALNLKAGGGGPCLTPRRRPLAAGEAAPCSVAAAWAGRRVGGRRGMALVAVGASGRRGK DGPGGGDGGDDEAKSKASSSSGNDDAASTGDSSDGLNQLHNESKSNISNSNYWRDVRANL VRREQELLVDPSAPAEQKTSSGEPAHQLPQKWAHPITMPEAGCVLVATEVLDDDSIFERT VILLLRLGSRGTFDSPFGVILNRPLYTKIKNVNPSFQDQATPFGDSPLFFGGPVDMSMFL VRASDNSRLKGFEEVIPGIRFGFRTDLEKAAVLMKSGAIKSQDLRFFVGHAAWDYEQLLS EIRAGYWAVASCSTELISDALTGDPSCLWTEILQLMGGHYSELSQKPKEDNQ

Transcript Sequence

Transcript ID	Os05t0420200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:20595690:20598798:1 gene:Os05g0420200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF179 family protein. (Os05t0420200-01)
Sequence	ACTCCCACTCCCACGCTTCTCTCCTCCTCCCCCATCTCCGCGCGGCCACGGCCATGTGGG CCCTCAACCTGAAGGCGGGCGGCGGGGGGCCCTGCCTCACGCCGAGGCGGCGCCCCCTCG CCGCCGGCGAGGCCGCCCCGTGCTCCGTGGCGGCGGCGTGGGCGGGGAGGAGGGTCGGGG GGAGGCGCGGCATGGCGCTGGTGGCGGTGGGCGCGTCGGGGAGGAGGGGCAAGGACGGCC CAGGCGGCGGCGATGGCGGGGACGATGAGGCCAAGAGCAAGGCCTCGTCTTCTTCCGGAA ATGACGATGCGGCCTCCACAGGTGACAGCTCTGATGGATTGAACCAACTGCATAACGAAT CCAAATCCAATATCTCTAACAGCAATTACTGGAGAGATGTCAGAGCAAACCTTGTGCGCC GGGAGCAGGAGCTCTTGGTAGATCCAAGTGCACCCGCAGAGCAGAAAACATCATCAGGAG AACCAGCACACCAGCTTCCTCAAAAGTGGGCTCACCCTATTACAATGCCAGAAGCAGGGT GTGTCTTGGTTGCTACCGAAGTGCTTGACGATGATAGCATCTTCGAAAGAACTGTCATTC TCCTCCTTAGACTAGGTTCCAGAGGCACATTTGATAGCCCGTTTGGAGTCATCCTGAACC GTCCACTCTACACAAAGATCAAGAATGTGAATCCATCATTCCAGGACCAGGCAACTCCGT TCGGTGACTCCCCCCTCTTCTTCGGAGGCCCTGTCGACATGAGCATGTTCCTGGTGAGGG CCAGTGACAACTCTCGTCTCAAGGGGTTCGAGGAGGTCATACCAGGCATTCGCTTTGGCT TCCGGACCGACCTAGAGAAGGCTGCTGTTCTGATGAAGAGTGGGGCAATTAAGAGCCAGG ACCTGAGGTTCTTCGTCGGGCACGCTGCGTGGGATTACGAGCAGCTGTTGAGCGAGATCA GGGCAGGATACTGGGCCGTCGCCTCCTGCAGCACGGAGCTGATCAGCGATGCACTGACAG GCGATCCTTCTTGTCTCTGGACCGAGATATTGCAGCTGATGGGAGGGCATTACTCGGAGC TCAGCCAGAAACCAAAGGAAGACAACCAGTAGATGCTGCTCATATGTACCATGACAAACA GCTAAAGGTTGTATCTGTCCTGTACATAATTGAAATAGGATAAATCTCACCTAGTACAAC TCTAGTCTCATGCCCTCCATGCTTCTTGTAGCAACTAGCAACTGCTATGTATGCAACTAT TGAATATGCATTTATCATGCTCAAATAAGCTCTGCACGATGATTGCGAATGG