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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0419600-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:20581072:20583157:-1 gene:Os05g0419600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0419600-01)
Sequence

ATGAGGCGGCCGCACGCGTGGTGCGACGGATCTACTAGCCCGGCCGCCTTCCTCCTTGCC
GCCGCGGCGATCTGCGGCCAGTTCGCGACAGGACTAGCTGGTGATACCCAAACATCCAAG
GATGATAAGAAAGCCCAGTCGAAAGGTCATACTGGGCGGACAGTTTTGATTGTCCTCCTA
GGAATTGGGGCAGTCGTCCTGTTGTCATTTTTCCTTTTCAAGTATTGGCAGAAGAAGAAA
AGAGAGGAACAGCACGCACGTCTTCTAAAGCTGTTTGAAGAGGATGATGACATTGAGGTT
GAGCTTGGTCTTAGAGATTGA

Peptide Sequence

PEP ID

Os05t0419600-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:20581072:20583157:-1 gene:Os05g0419600 transcript:Os05t0419600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0419600-01)
Sequence

MRRPHAWCDGSTSPAAFLLAAAAICGQFATGLAGDTQTSKDDKKAQSKGHTGRTVLIVLL
GIGAVVLLSFFLFKYWQKKKREEQHARLLKLFEEDDDIEVELGLRD

Transcript Sequence

Transcript ID

Os05t0419600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:20581072:20583157:-1 gene:Os05g0419600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0419600-01)
Sequence

GGCCAGCGACCGACTCGTCCGTTAGATACCCACCGGGCGGCCACCCACACGCACGCGGCG
CCTCTTCTTTCATAACACGCCACGGAACGGAAGCTTCCGCCTCCGATTCCACCACCACCA
CCACCACCACCGCCGAGCACGAGGAGGGGGAAGGTTTGGGCCGGGCGGCGGCGGGGGTTG
GAGATCGAGGAGAGTCGCGTCGCGTAGCTGATCCGAGCCGAGAGGTGCCCAGGAGGCGCG
GTGAGATGAGGCGGCCGCACGCGTGGTGCGACGGATCTACTAGCCCGGCCGCCTTCCTCC
TTGCCGCCGCGGCGATCTGCGGCCAGTTCGCGACAGGACTAGCTGGTGATACCCAAACAT
CCAAGGATGATAAGAAAGCCCAGTCGAAAGGTCATACTGGGCGGACAGTTTTGATTGTCC
TCCTAGGAATTGGGGCAGTCGTCCTGTTGTCATTTTTCCTTTTCAAGTATTGGCAGAAGA
AGAAAAGAGAGGAACAGCACGCACGTCTTCTAAAGCTGTTTGAAGAGGATGATGACATTG
AGGTTGAGCTTGGTCTTAGAGATTGAAGGTCTTCATTGTACAGCAAGAGTATCTTGGCTG
ACAAGGTTTTCCTGGCTGGTCCTCACAGCATTTTCATGTTATTGTAAAGAATTTGTTGTA
TTTAAACTCAACAGGCCTCCTTAGAAAGATCTACTGTATTTTAGTTTTTGGTGAGTGGCA
TCCACGATGAATGAAAACATGGGCTTTAGCTTTGAGGATGAAATGTGGAGGTCTGGAAAA
CATTATTTTCTGTTTTTAAAAAGGAATTGAGAATATAAAACATTGCTAC