Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0416400-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:20379338:20381121:1 gene:Os05g0416400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:P-450 51H8 description:Similar to Cytochrome P450 CYP51H10. (Os05t0416400-00)
Sequence

ATGGATCTTGTTAGCATTTCCATTTACATGTGGTCCATGGTAGCCCTTTGTACCATCATC
ACTGCAATGGTGACCACCAAACTTGCAAGAGTAAGAAGACCAATTACCCTCAATCCAAAG
AGCAAAAGACCACTTCCACCGGTGGTGAATGTCATTGCCCTTCTAGAGCACTTACCTAGG
CTATGTACAAAGGGTGTAATTCCGGTGTACAAAGGGAGTGTGTTCACGGTAAGTCTGTTT
GGACTGAAGGCAACCTTCTTGGTTGGACCAGAGGTCTCGGCTCATTTCTATCAAGGGATG
GATTCGGAGATTAGCCAGGGCGATCTGTATGAATTCACCGTACCCTTGTTCGGCAAAGGG
GTTGGCTTTGACATAGATAATGCTACTCGAACCGAGCATCTCCGTTTCTTTATTGATGCG
ATAAAGACGTCGAAGTTGCGAAACCATGTCAACTCCATGGTGCAGGAAGTAGAGGACTAT
TTTGCAAAATGGGGAGAAAATGGCATAGTTGATATAAAACATGAGTTTGAGAAGTTACTC
ATGTTGATCTCAGGCCATTGCCTACTCGGGAAGGAGGTTCGGGACAACATGTTCGATGAG
GTCTTCTCATTGTTCCATGAACTTGACAGCGGGGTTGGCTTGGGCAGTGTCATCTTCCCA
TATATCCCAATTCCATCGCACATTCGATGCGACAAAGCACACGCCAAACTTGCAAAAATA
TTCTCCAAAATTGTGAGGTCGAGGAGGGACTCCAACCGACCAGCCGAGCAGGATGTACTC
CAGTACTTGATCGATTCCAAACATAGAGATGGAAACTCCACTACCGAACAAGAGGTCACT
GGGTGGATCATTTCTATGGTTTTTGCCGGAAAACACACAAGCACAAACTCCACTACCTGG
ACTGGAGCATGCCTACTAACTCATGACAAGTTCTTGACAGAGGCACTCGATGAGCAAAAG
CATATGATTCAAAAACATGGAGACCATATAGATTATAATGTGTTGTTAGATATGGACATC
TTGCACTGCTGCATCAAGGAGGCCCTAAGGATGCACCCTGTGGCGCCAATAATATATCGC
AAGGCACAAAAATCATTTGTTGTAAGGACGAGAGAAGGCGATGCATATGACATTCCAGAA
GGGCATAATTTACTGAGCCCAATGATATTCAACAACAGACTACCCTACATTTATAAGGAT
CCCCATATGTATGACCCAGATAGGTTTGCTCCTAAAAGAGAGGAGGATAAAGTTGGTGGC
ATGTTCTCTTATACATCGTTTGGTGGTGGGAGGCATATTTGCATTGGTGAGGCTTATGCT
TATATGCAAATTAAGGTGATATGGAGTCATTTACTAAGGAACTTTGAGTTGAAATTGGAG
TCTCCTTTCCCTAAGACAAACTGGAGCAAAATCCTGCTGGAACCTTGGGGAAAAGTAATG
GTAAGTTACAAGAGGAGGAGGCTCCCCACAGCTTAG

Peptide Sequence

PEP ID

Os05t0416400-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:20379338:20381121:1 gene:Os05g0416400 transcript:Os05t0416400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:P-450 51H8 description:Similar to Cytochrome P450 CYP51H10. (Os05t0416400-00)
Sequence

MDLVSISIYMWSMVALCTIITAMVTTKLARVRRPITLNPKSKRPLPPVVNVIALLEHLPR
LCTKGVIPVYKGSVFTVSLFGLKATFLVGPEVSAHFYQGMDSEISQGDLYEFTVPLFGKG
VGFDIDNATRTEHLRFFIDAIKTSKLRNHVNSMVQEVEDYFAKWGENGIVDIKHEFEKLL
MLISGHCLLGKEVRDNMFDEVFSLFHELDSGVGLGSVIFPYIPIPSHIRCDKAHAKLAKI
FSKIVRSRRDSNRPAEQDVLQYLIDSKHRDGNSTTEQEVTGWIISMVFAGKHTSTNSTTW
TGACLLTHDKFLTEALDEQKHMIQKHGDHIDYNVLLDMDILHCCIKEALRMHPVAPIIYR
KAQKSFVVRTREGDAYDIPEGHNLLSPMIFNNRLPYIYKDPHMYDPDRFAPKREEDKVGG
MFSYTSFGGGRHICIGEAYAYMQIKVIWSHLLRNFELKLESPFPKTNWSKILLEPWGKVM
VSYKRRRLPTA

Transcript Sequence

Transcript ID

Os05t0416400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:20379338:20381121:1 gene:Os05g0416400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:P-450 51H8 description:Similar to Cytochrome P450 CYP51H10. (Os05t0416400-00)
Sequence

CTGTGATTCTTTATATTGTTGCAGTGCTGTTAATTCCTACCTCCAACTAGGCTGGTTGTT
GTCATGGATCTTGTTAGCATTTCCATTTACATGTGGTCCATGGTAGCCCTTTGTACCATC
ATCACTGCAATGGTGACCACCAAACTTGCAAGAGTAAGAAGACCAATTACCCTCAATCCA
AAGAGCAAAAGACCACTTCCACCGGTGGTGAATGTCATTGCCCTTCTAGAGCACTTACCT
AGGCTATGTACAAAGGGTGTAATTCCGGTGTACAAAGGGAGTGTGTTCACGGTAAGTCTG
TTTGGACTGAAGGCAACCTTCTTGGTTGGACCAGAGGTCTCGGCTCATTTCTATCAAGGG
ATGGATTCGGAGATTAGCCAGGGCGATCTGTATGAATTCACCGTACCCTTGTTCGGCAAA
GGGGTTGGCTTTGACATAGATAATGCTACTCGAACCGAGCATCTCCGTTTCTTTATTGAT
GCGATAAAGACGTCGAAGTTGCGAAACCATGTCAACTCCATGGTGCAGGAAGTAGAGGAC
TATTTTGCAAAATGGGGAGAAAATGGCATAGTTGATATAAAACATGAGTTTGAGAAGTTA
CTCATGTTGATCTCAGGCCATTGCCTACTCGGGAAGGAGGTTCGGGACAACATGTTCGAT
GAGGTCTTCTCATTGTTCCATGAACTTGACAGCGGGGTTGGCTTGGGCAGTGTCATCTTC
CCATATATCCCAATTCCATCGCACATTCGATGCGACAAAGCACACGCCAAACTTGCAAAA
ATATTCTCCAAAATTGTGAGGTCGAGGAGGGACTCCAACCGACCAGCCGAGCAGGATGTA
CTCCAGTACTTGATCGATTCCAAACATAGAGATGGAAACTCCACTACCGAACAAGAGGTC
ACTGGGTGGATCATTTCTATGGTTTTTGCCGGAAAACACACAAGCACAAACTCCACTACC
TGGACTGGAGCATGCCTACTAACTCATGACAAGTTCTTGACAGAGGCACTCGATGAGCAA
AAGCATATGATTCAAAAACATGGAGACCATATAGATTATAATGTGTTGTTAGATATGGAC
ATCTTGCACTGCTGCATCAAGGAGGCCCTAAGGATGCACCCTGTGGCGCCAATAATATAT
CGCAAGGCACAAAAATCATTTGTTGTAAGGACGAGAGAAGGCGATGCATATGACATTCCA
GAAGGGCATAATTTACTGAGCCCAATGATATTCAACAACAGACTACCCTACATTTATAAG
GATCCCCATATGTATGACCCAGATAGGTTTGCTCCTAAAAGAGAGGAGGATAAAGTTGGT
GGCATGTTCTCTTATACATCGTTTGGTGGTGGGAGGCATATTTGCATTGGTGAGGCTTAT
GCTTATATGCAAATTAAGGTGATATGGAGTCATTTACTAAGGAACTTTGAGTTGAAATTG
GAGTCTCCTTTCCCTAAGACAAACTGGAGCAAAATCCTGCTGGAACCTTGGGGAAAAGTA
ATGGTAAGTTACAAGAGGAGGAGGCTCCCCACAGCTTAG