Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0415700-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:20315236:20320672:1 gene:Os05g0415700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 20 protein. (Os05t0415700-01)
Sequence	ATGGCGCCAGCGATGGCTCTGAGGTTGCTGGTGGTGGTGGCGGTGGCGGCGGTGGTGTCC TGCGCCGTCGCCGCCGATGAGGGGAGCGTCGTCGAGGTGTGGCCAATGCCGGCGACGGCG AGCAAAGGCGGGCAGACGCTGCACGTCAGCAGGGAGCTCAGGATGACGGCGGAGGGGAGC AAGTACGCCGACGGGGAGGCCATCCTGAAGGACGCGTTCCAGAGGATGGTGACGCTGATA GAGCTGGACCACGTCATCAATGGCAGCTCCCAGGGCTTGCCGCTGCTCGCCGGTGTGAAT GTCGTCGTGCATTTGCCCGGCGATGAGCTCAACTTCGGGGTGGATGAATCATACAATTTG TCAGTGCCTGCAACTGGAAGTCCAATTTATGCTCAAATTGAGGCCCAAACAGTTTTTGGA GCACTTCATGCCTTGGAGACGTTTAGCCAATTGTGTAACTTTGATTTCACCTCAAGGTTA ATTGAACTTCAGTCTGCCCCTTGGAGCATCACGGACATGCCCAGATTTCCTTATCGAGGG CTTCTTATTGATACTTCAAGGCATTACCTTCCTGTCCCAGTAATAAAAAGCGTAATCGAT TCGATGACCTACAGCAAGTTGAATGTTCTTCATTGGCATATCGTGGATGAACAGTCATTT CCTATAGAAATACCTTCATACCCAAAATTATGGAATGGTGCATACTCTTACTCAGAGAGA TATACAATGGATGATGCTATCGACATTGTTCAGTATGCTGAACGACGAGGTGTCAATGTC TTAGCTGAGATTGATGTTCCTGGCCATGCTCTCTCATGGGGTGTTGGTTATCCGTCGTTG TGGCCATCAGCTACTTGTAAAGAACCACTTGATGTCAGCAGCGAATCTACATTCCAAGTG ATTAATGGAATTCTTTCAGATTTCAGCAAGGTTTTTAAGTTCAAGTTTGTCCATTTGGGA GGTGATGAGGTCAATACAAGTTGCTGGACTTCCACACCACGCGTTAAAGCATGGTTGGCC CAACATGGTATGAAAGAATCTGATGCCTACAGATATTTTGTATTGAGAGCTCAAAAGATA GCAAAATCACATGGCTACGAAGTTATTAACTGGGAAGAAACCTTTAACAACTTTGGAGAC AAACTAGACCGCAGAACTGTGGTGCATAACTGGCTTGGAGGTGGAGTTGCAGAGAAAGTT GTTGCTGCTGGTTTGAGATGCATTGTGAGCAACCAGGATAAGTGGTACCTAGATCACTTG GAAGTTACATGGGATGGATTTTATATGAATGAACCACTGAGAAATATCAAGAACCCGGCA CAGCAGAAGTTGGTTCTTGGTGGTGAGGTATGCATGTGGGCTGAACACATAGATGCGTCT GACATTCAGCAAACCATTTGGCCACGTGCTGCAGCAGCTGCAGAGCGGTTGTGGACTCCG TTTGAGAAGCTTTCAAAGGAGTGGGAAATAGCAGCGCTCAGCGCAAGACTGGCACGCTTC AGGTGCTTGCTGAATCATAGAGGGATCGCTGCTGGACCGGTAACTGGTTATGGACGTTCC GCGCCAGCAGAGCCAAGCTCCTGTATAAAGCAGTAG

Peptide Sequence

PEP ID	Os05t0415700-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:20315236:20320672:1 gene:Os05g0415700 transcript:Os05t0415700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 20 protein. (Os05t0415700-01)
Sequence	MAPAMALRLLVVVAVAAVVSCAVAADEGSVVEVWPMPATASKGGQTLHVSRELRMTAEGS KYADGEAILKDAFQRMVTLIELDHVINGSSQGLPLLAGVNVVVHLPGDELNFGVDESYNL SVPATGSPIYAQIEAQTVFGALHALETFSQLCNFDFTSRLIELQSAPWSITDMPRFPYRG LLIDTSRHYLPVPVIKSVIDSMTYSKLNVLHWHIVDEQSFPIEIPSYPKLWNGAYSYSER YTMDDAIDIVQYAERRGVNVLAEIDVPGHALSWGVGYPSLWPSATCKEPLDVSSESTFQV INGILSDFSKVFKFKFVHLGGDEVNTSCWTSTPRVKAWLAQHGMKESDAYRYFVLRAQKI AKSHGYEVINWEETFNNFGDKLDRRTVVHNWLGGGVAEKVVAAGLRCIVSNQDKWYLDHL EVTWDGFYMNEPLRNIKNPAQQKLVLGGEVCMWAEHIDASDIQQTIWPRAAAAAERLWTP FEKLSKEWEIAALSARLARFRCLLNHRGIAAGPVTGYGRSAPAEPSSCIKQ

Transcript Sequence

Transcript ID	Os05t0415700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:20315236:20320672:1 gene:Os05g0415700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 20 protein. (Os05t0415700-01)
Sequence	TTGTGGCTGCATTAGCCACCATTGTTACTGATGTTCTCTACTGCCACTGCTATCCACCTG TGCACTCCATAGTTTGGCACAATTCATAAAGGCAGCAGCAGCAGCAGCAGCAGGAGCAGG ATGCACTATCATCTTCTTCTTGTTGTTTTTCTTGCAAAAGGCGGGAAGGCAGAGGCAAAA GGGCGCTAAAAGTTGCGGCCTTTTCTTGCACCCACCTAGTCGCTGGCGTGCACATTATTA AGCTCTTCCACTTCGGCACATCCCCGGATCAATCGGCAACGGCGTTTCTCTTCATCTTCT TGCTCCGGCGTGGTCTGGTCGCCGGCGTTACTGACGGCGACGGTTTTTGAAGCTGCATTC AAGTAGGGATAGGATGGCGCCAGCGATGGCTCTGAGGTTGCTGGTGGTGGTGGCGGTGGC GGCGGTGGTGTCCTGCGCCGTCGCCGCCGATGAGGGGAGCGTCGTCGAGGTGTGGCCAAT GCCGGCGACGGCGAGCAAAGGCGGGCAGACGCTGCACGTCAGCAGGGAGCTCAGGATGAC GGCGGAGGGGAGCAAGTACGCCGACGGGGAGGCCATCCTGAAGGACGCGTTCCAGAGGAT GGTGACGCTGATAGAGCTGGACCACGTCATCAATGGCAGCTCCCAGGGCTTGCCGCTGCT CGCCGGTGTGAATGTCGTCGTGCATTTGCCCGGCGATGAGCTCAACTTCGGGGTGGATGA ATCATACAATTTGTCAGTGCCTGCAACTGGAAGTCCAATTTATGCTCAAATTGAGGCCCA AACAGTTTTTGGAGCACTTCATGCCTTGGAGACGTTTAGCCAATTGTGTAACTTTGATTT CACCTCAAGGTTAATTGAACTTCAGTCTGCCCCTTGGAGCATCACGGACATGCCCAGATT TCCTTATCGAGGGCTTCTTATTGATACTTCAAGGCATTACCTTCCTGTCCCAGTAATAAA AAGCGTAATCGATTCGATGACCTACAGCAAGTTGAATGTTCTTCATTGGCATATCGTGGA TGAACAGTCATTTCCTATAGAAATACCTTCATACCCAAAATTATGGAATGGTGCATACTC TTACTCAGAGAGATATACAATGGATGATGCTATCGACATTGTTCAGTATGCTGAACGACG AGGTGTCAATGTCTTAGCTGAGATTGATGTTCCTGGCCATGCTCTCTCATGGGGTGTTGG TTATCCGTCGTTGTGGCCATCAGCTACTTGTAAAGAACCACTTGATGTCAGCAGCGAATC TACATTCCAAGTGATTAATGGAATTCTTTCAGATTTCAGCAAGGTTTTTAAGTTCAAGTT TGTCCATTTGGGAGGTGATGAGGTCAATACAAGTTGCTGGACTTCCACACCACGCGTTAA AGCATGGTTGGCCCAACATGGTATGAAAGAATCTGATGCCTACAGATATTTTGTATTGAG AGCTCAAAAGATAGCAAAATCACATGGCTACGAAGTTATTAACTGGGAAGAAACCTTTAA CAACTTTGGAGACAAACTAGACCGCAGAACTGTGGTGCATAACTGGCTTGGAGGTGGAGT TGCAGAGAAAGTTGTTGCTGCTGGTTTGAGATGCATTGTGAGCAACCAGGATAAGTGGTA CCTAGATCACTTGGAAGTTACATGGGATGGATTTTATATGAATGAACCACTGAGAAATAT CAAGAACCCGGCACAGCAGAAGTTGGTTCTTGGTGGTGAGGTATGCATGTGGGCTGAACA CATAGATGCGTCTGACATTCAGCAAACCATTTGGCCACGTGCTGCAGCAGCTGCAGAGCG GTTGTGGACTCCGTTTGAGAAGCTTTCAAAGGAGTGGGAAATAGCAGCGCTCAGCGCAAG ACTGGCACGCTTCAGGTGCTTGCTGAATCATAGAGGGATCGCTGCTGGACCGGTAACTGG TTATGGACGTTCCGCGCCAGCAGAGCCAAGCTCCTGTATAAAGCAGTAGGATATCCAAAG CAGATAAATATTATTATTATTATTATTCATATTGGACTGAAAATCATTTCAGACACCCAT TTAACCGCTGTAAGCAGAAGCAGTCAAAGGAAAAGGCTGGGGCCAATGTAACTGAACTCT GAGTTACAAGAGAGTGTTTCAATAATATTGCATTCTCATTTTCATGTAGT