Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0414700-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:20283411:20286888:-1 gene:Os05g0414700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1. (Os05t0414700-01)
Sequence	ATGACAGATCATTATTATGCTCCTCTGAGGCTTATTCTTCTCTTGATATTGAGTGCCACC TGTTTTGGCTCTGAACTTGATGTTCAGTGCTTGAAAACCATATTCCAGTCAGTGACCGAT CCCAATGGTATACTCAAATCCTCATGGAGTTTTGTCAACAACGGCACCCCTGGTTACATC TGCAAATTTACTGGGGTGGAATGTTGGCATCCAGATGAGAACCGAGTTCTTTCTTTGCGT CTCGGCAACCTTGGTCTTCAGGGTCCATTTCCTGCAGGCCTTCAGAACTGTACTAGTATG ACTGGGCTAGATCTGTCGAGTAACAACTTTACAGGACTCATTCCTCAGGACATCTCCCAG CAAATACCATACTTGACATCACTGGACCTCTCCTACAATAGGTTTTCAGGCCAAATCCCA GTAAATATTTCAAATATGACATATTTAAACACACTCAATCTCCAACATAACCAGTTCACT GGTCAAATTCCACTGCAGTTCAATCTTCTTGGTCGGTTAACATCATTCAATGTTGCAGAG AACCGACTATCAGGGCCTATTCCAAATAATCTAAATAAATTTCCGTCATCAAATTTTGCT GGTAATCAAGGCCTTTGTGGGCTACCATTGGATGGCTGCCAAGCTTCAGCAAAGAGCAAG AACAATGCAGCAATCATTGGAGCTGTTGTTGGTGTTGTAGTTGTGATCATAATTGGCGTA ATAATCGTATTCTTTTGTCTGCGGAAATTACCAGCCAAGAAGCCAAAGGTCGAGGAAGAA AATAAGTGGGCAAAGAGTATCAAAGGAACTAAAACCATCAAGGTTTCTATGTTCGAGAAT CCAGTTTCAAAGATGAAACTAAGCGATCTTATGAAGGCTACCAATGAATTTTGCAAAGAG AACATCATAGGTACTGGGAGAACAGGAACTATGTACAGGGCAGTGCTACCTGATGGTTCT TTTCTTGCTGTCAAAAGGCTACAAGATTCTCAACATTCTGAAACTCAATTCACGTCGGAG ATGAAGACACTTGGCCAAGTAAGGCATCGCAACTTAGTTCCTCTCCTAGGATTTTGCATT GCTAAGAGGGAGAGGTTGTTGGTGTACAAGCACATGCCGAAAGGTTCACTCTATGATCAG TTAAATCAAGAAGAAGGCAAAGACTGTAAGATGGATTGGACTCTGAGGTTAAGAATCGGC ATTGGTGCAGCAAAAGGTCTTGCGTATCTTCATCACACTTGCAATCCTCGAGTCCTTCAC CGCAATATAAGCTCCAAGTGCATCCTCCTAGATGAGGACTACGAACCAAAGATATCAGAT TTTGGACTTGCTAGGCTTATGAATCCAATAGACACCCACCTTAGCACCTTTGTTAATGGA GAATTTGGAGATCTTGGTTATGTGGCACCAGAGTATGCACGTACTCTGGTGGCCACGCCA AAGGGTGATGTGTACAGCTTCGGTGTTGTTCTTCTTGAGCTTATCACCGGCGAGAGGCCT ACTCATGTTTCAACTGCACCGGAGAATTTCAGAGGGAGCCTAGTAGAGTGGATCAACTAC CTATCAAACAATGCCCTCCTCCAAGATGCCGTTGACAAGTCATTGATAGGGAAGGGCAGT GACGGCGAGCTAATGCAATTTCTGAAAGTCGCATGTTCTTGCACAATTTCCACTCCAAAG GAGAGACCGACAATGTTTGAGGTCTATCAGCTCCTCAGAGCCATTGGAGAAAAGTACCAT TTCTCGGCGGAGGATGACTTGATGATGCTGCCACCTCTAAGCACAGATGGAGAAACCCTT GACGAGCTCATTGTTGCCCAGTAA

Peptide Sequence

PEP ID	Os05t0414700-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:20283411:20286888:-1 gene:Os05g0414700 transcript:Os05t0414700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1. (Os05t0414700-01)
Sequence	MTDHYYAPLRLILLLILSATCFGSELDVQCLKTIFQSVTDPNGILKSSWSFVNNGTPGYI CKFTGVECWHPDENRVLSLRLGNLGLQGPFPAGLQNCTSMTGLDLSSNNFTGLIPQDISQ QIPYLTSLDLSYNRFSGQIPVNISNMTYLNTLNLQHNQFTGQIPLQFNLLGRLTSFNVAE NRLSGPIPNNLNKFPSSNFAGNQGLCGLPLDGCQASAKSKNNAAIIGAVVGVVVVIIIGV IIVFFCLRKLPAKKPKVEEENKWAKSIKGTKTIKVSMFENPVSKMKLSDLMKATNEFCKE NIIGTGRTGTMYRAVLPDGSFLAVKRLQDSQHSETQFTSEMKTLGQVRHRNLVPLLGFCI AKRERLLVYKHMPKGSLYDQLNQEEGKDCKMDWTLRLRIGIGAAKGLAYLHHTCNPRVLH RNISSKCILLDEDYEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATP KGDVYSFGVVLLELITGERPTHVSTAPENFRGSLVEWINYLSNNALLQDAVDKSLIGKGS DGELMQFLKVACSCTISTPKERPTMFEVYQLLRAIGEKYHFSAEDDLMMLPPLSTDGETL DELIVAQ

Transcript Sequence

Transcript ID	Os05t0414700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:20283411:20286888:-1 gene:Os05g0414700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1. (Os05t0414700-01)
Sequence	GCCTTCTCTTTTGACGGCCTGCCTCCCCTCCCCTCCCTCCTCTGCCCCCCGCGTCCAAGT CTTCCTTCTCCCACCATCGTCGTAACTATCTCGTTGTTCATTCGCCTCCTCCGCTCCTCG TCTTCGGGTGTGCGGGCTCCCTTCCTCCTGCTTCTTCAGGCGACTGCTAATTTTGAAGTG CCATTTCTCATCGTCAAGGAGAGGTGGCATTAATCCGCAGCAAGTGCTCGATGACAGATC ATTATTATGCTCCTCTGAGGCTTATTCTTCTCTTGATATTGAGTGCCACCTGTTTTGGCT CTGAACTTGATGTTCAGTGCTTGAAAACCATATTCCAGTCAGTGACCGATCCCAATGGTA TACTCAAATCCTCATGGAGTTTTGTCAACAACGGCACCCCTGGTTACATCTGCAAATTTA CTGGGGTGGAATGTTGGCATCCAGATGAGAACCGAGTTCTTTCTTTGCGTCTCGGCAACC TTGGTCTTCAGGGTCCATTTCCTGCAGGCCTTCAGAACTGTACTAGTATGACTGGGCTAG ATCTGTCGAGTAACAACTTTACAGGACTCATTCCTCAGGACATCTCCCAGCAAATACCAT ACTTGACATCACTGGACCTCTCCTACAATAGGTTTTCAGGCCAAATCCCAGTAAATATTT CAAATATGACATATTTAAACACACTCAATCTCCAACATAACCAGTTCACTGGTCAAATTC CACTGCAGTTCAATCTTCTTGGTCGGTTAACATCATTCAATGTTGCAGAGAACCGACTAT CAGGGCCTATTCCAAATAATCTAAATAAATTTCCGTCATCAAATTTTGCTGGTAATCAAG GCCTTTGTGGGCTACCATTGGATGGCTGCCAAGCTTCAGCAAAGAGCAAGAACAATGCAG CAATCATTGGAGCTGTTGTTGGTGTTGTAGTTGTGATCATAATTGGCGTAATAATCGTAT TCTTTTGTCTGCGGAAATTACCAGCCAAGAAGCCAAAGGTCGAGGAAGAAAATAAGTGGG CAAAGAGTATCAAAGGAACTAAAACCATCAAGGTTTCTATGTTCGAGAATCCAGTTTCAA AGATGAAACTAAGCGATCTTATGAAGGCTACCAATGAATTTTGCAAAGAGAACATCATAG GTACTGGGAGAACAGGAACTATGTACAGGGCAGTGCTACCTGATGGTTCTTTTCTTGCTG TCAAAAGGCTACAAGATTCTCAACATTCTGAAACTCAATTCACGTCGGAGATGAAGACAC TTGGCCAAGTAAGGCATCGCAACTTAGTTCCTCTCCTAGGATTTTGCATTGCTAAGAGGG AGAGGTTGTTGGTGTACAAGCACATGCCGAAAGGTTCACTCTATGATCAGTTAAATCAAG AAGAAGGCAAAGACTGTAAGATGGATTGGACTCTGAGGTTAAGAATCGGCATTGGTGCAG CAAAAGGTCTTGCGTATCTTCATCACACTTGCAATCCTCGAGTCCTTCACCGCAATATAA GCTCCAAGTGCATCCTCCTAGATGAGGACTACGAACCAAAGATATCAGATTTTGGACTTG CTAGGCTTATGAATCCAATAGACACCCACCTTAGCACCTTTGTTAATGGAGAATTTGGAG ATCTTGGTTATGTGGCACCAGAGTATGCACGTACTCTGGTGGCCACGCCAAAGGGTGATG TGTACAGCTTCGGTGTTGTTCTTCTTGAGCTTATCACCGGCGAGAGGCCTACTCATGTTT CAACTGCACCGGAGAATTTCAGAGGGAGCCTAGTAGAGTGGATCAACTACCTATCAAACA ATGCCCTCCTCCAAGATGCCGTTGACAAGTCATTGATAGGGAAGGGCAGTGACGGCGAGC TAATGCAATTTCTGAAAGTCGCATGTTCTTGCACAATTTCCACTCCAAAGGAGAGACCGA CAATGTTTGAGGTCTATCAGCTCCTCAGAGCCATTGGAGAAAAGTACCATTTCTCGGCGG AGGATGACTTGATGATGCTGCCACCTCTAAGCACAGATGGAGAAACCCTTGACGAGCTCA TTGTTGCCCAGTAACTGCAAACCCAATGTTCCACAGAAGGCAACCAAGTGGAGGTTGTTT CTTCTGCGCGTCATTACCATGCTTAGATGAGTGAGGTGGCTTTACATGATGTACTATTAA GTAGTATCAGTATACTGCATCCGCTGTATAATTTTTGTAGCTTGTTGTTATCTACCATTG GGAGGTGCTAGCAGCAGCAATGATGATCTTTCACTCAACCGATATGGGGATGGGGTATTA ACTACTCCTAATAGTAGTTTGCTCCTCATGTGATGGGAATATGCCATATTGGCATTTATT CAGTCATTTTTCATGATGTCATTTGTACTTACGCCACGGGATGAGGAATACTGAACGTCA AAATGTGTGGAATGCCACCTTATGATGTCTTCC